BLASTX nr result
ID: Coptis24_contig00021857
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021857 (226 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI32284.3| unnamed protein product [Vitis vinifera] 105 4e-21 ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated... 105 4e-21 emb|CAN67842.1| hypothetical protein VITISV_016665 [Vitis vinifera] 105 4e-21 ref|XP_002524308.1| U3 small nucleolar RNA-associated protein, p... 105 5e-21 ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|2... 100 1e-19 >emb|CBI32284.3| unnamed protein product [Vitis vinifera] Length = 460 Score = 105 bits (262), Expect = 4e-21 Identities = 51/75 (68%), Positives = 62/75 (82%) Frame = +2 Query: 2 VSNLDIEELGLLMRFLHKYTTMPSYSGFLIGFTKKVLQMHAEDVNASDVLKWHVRQLKLS 181 VSNLD EELGLL+ FLH+++T+P Y+G L+G TKKV+QM AED+ ASDVLK H+R LK S Sbjct: 373 VSNLDTEELGLLLAFLHRHSTVPRYAGLLMGLTKKVVQMRAEDIIASDVLKGHIRNLKRS 432 Query: 182 VEEEIHTHQSLQEIQ 226 VEEE+ QSLQEIQ Sbjct: 433 VEEEVRIQQSLQEIQ 447 >ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog [Vitis vinifera] Length = 528 Score = 105 bits (262), Expect = 4e-21 Identities = 51/75 (68%), Positives = 62/75 (82%) Frame = +2 Query: 2 VSNLDIEELGLLMRFLHKYTTMPSYSGFLIGFTKKVLQMHAEDVNASDVLKWHVRQLKLS 181 VSNLD EELGLL+ FLH+++T+P Y+G L+G TKKV+QM AED+ ASDVLK H+R LK S Sbjct: 441 VSNLDTEELGLLLAFLHRHSTVPRYAGLLMGLTKKVVQMRAEDIIASDVLKGHIRNLKRS 500 Query: 182 VEEEIHTHQSLQEIQ 226 VEEE+ QSLQEIQ Sbjct: 501 VEEEVRIQQSLQEIQ 515 >emb|CAN67842.1| hypothetical protein VITISV_016665 [Vitis vinifera] Length = 570 Score = 105 bits (262), Expect = 4e-21 Identities = 51/75 (68%), Positives = 62/75 (82%) Frame = +2 Query: 2 VSNLDIEELGLLMRFLHKYTTMPSYSGFLIGFTKKVLQMHAEDVNASDVLKWHVRQLKLS 181 VSNLD EELGLL+ FLH+++T+P Y+G L+G TKKV+QM AED+ ASDVLK H+R LK S Sbjct: 441 VSNLDTEELGLLLAFLHRHSTVPRYAGLLMGLTKKVVQMRAEDIIASDVLKGHIRNLKRS 500 Query: 182 VEEEIHTHQSLQEIQ 226 VEEE+ QSLQEIQ Sbjct: 501 VEEEVRIQQSLQEIQ 515 >ref|XP_002524308.1| U3 small nucleolar RNA-associated protein, putative [Ricinus communis] gi|223536399|gb|EEF38048.1| U3 small nucleolar RNA-associated protein, putative [Ricinus communis] Length = 525 Score = 105 bits (261), Expect = 5e-21 Identities = 51/75 (68%), Positives = 60/75 (80%) Frame = +2 Query: 2 VSNLDIEELGLLMRFLHKYTTMPSYSGFLIGFTKKVLQMHAEDVNASDVLKWHVRQLKLS 181 VSNLD EELGLL+ FLHKY+TMP +SG L+G T+KVL M A+D+ ASD LK H+R LK S Sbjct: 438 VSNLDEEELGLLLGFLHKYSTMPRHSGLLMGLTRKVLDMRADDIKASDALKGHIRNLKRS 497 Query: 182 VEEEIHTHQSLQEIQ 226 VEEEI H +LQEIQ Sbjct: 498 VEEEIRIHHALQEIQ 512 >ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|222843286|gb|EEE80833.1| predicted protein [Populus trichocarpa] Length = 534 Score = 100 bits (249), Expect = 1e-19 Identities = 50/75 (66%), Positives = 59/75 (78%) Frame = +2 Query: 2 VSNLDIEELGLLMRFLHKYTTMPSYSGFLIGFTKKVLQMHAEDVNASDVLKWHVRQLKLS 181 V NLD EELGLL+ FLHK++TMP +SG L+G TKKVL+M A+D+ ASD LK H+R LK S Sbjct: 447 VVNLDEEELGLLLGFLHKHSTMPRHSGLLMGLTKKVLEMRADDIRASDALKSHIRNLKRS 506 Query: 182 VEEEIHTHQSLQEIQ 226 VEEEI SLQEIQ Sbjct: 507 VEEEIRIQHSLQEIQ 521