BLASTX nr result

ID: Coptis24_contig00021856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021856
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276890.2| PREDICTED: cellulose synthase A catalytic su...   369   e-100
dbj|BAM05574.1| cellulose synthase 3, partial [Eucalyptus pyroca...   362   4e-98
gb|AEK31217.1| cellulose synthase A [Eucalyptus camaldulensis]        362   6e-98
gb|ACT67415.1| cellulose synthase [Shorea parvifolia subsp. parv...   360   1e-97
ref|XP_003522926.1| PREDICTED: cellulose synthase A catalytic su...   360   2e-97

>ref|XP_002276890.2| PREDICTED: cellulose synthase A catalytic subunit 7
           [UDP-forming]-like isoform 2 [Vitis vinifera]
           gi|297743668|emb|CBI36551.3| unnamed protein product
           [Vitis vinifera]
          Length = 1037

 Score =  369 bits (947), Expect = e-100
 Identities = 176/230 (76%), Positives = 195/230 (84%)
 Frame = +2

Query: 44  FNLDDEQNKHAHLAEAMLHNKMSYGRGPDNDENAQFPPIITSAISRPVSGEFPISNHNHG 223
           FN+DDEQNK+  +AEAMLH KMSYGRGP++D+NAQFPP+IT   SRPVSGEFPIS+H  G
Sbjct: 111 FNIDDEQNKNKLIAEAMLHGKMSYGRGPEDDDNAQFPPVITGVRSRPVSGEFPISSHAPG 170

Query: 224 DPILSSTLHKRIHPYPVSEPGSARWDEKKEEGWKERKDDWKLKQGNLGXXXXXXXXXXXX 403
           +  LSS+LHKR+HPYPVSEPGSARWDEKKE GWKER DDWK++QGNLG            
Sbjct: 171 EQGLSSSLHKRVHPYPVSEPGSARWDEKKEGGWKERMDDWKMQQGNLGPDADDYNDPDMA 230

Query: 404 XXXXARQPLSRKVSIASSKINPYRMVIVIRLVVLAFFLRYRILNPVHDAIPLWLASVICE 583
               ARQPLSRKV IASSK+NPYRMVIV RL+VLAFFLRYRILNPVHDA+ LWL SVICE
Sbjct: 231 MIEEARQPLSRKVPIASSKVNPYRMVIVARLLVLAFFLRYRILNPVHDALGLWLVSVICE 290

Query: 584 IWFACSWILDQFPKWYPIDRETYLDRLSLRYEREGEPSMLAAVDIFVSTV 733
           IWFA SWILDQFPKW+PIDRETYLDRLS RYEREGEP+ML+ VDIFVSTV
Sbjct: 291 IWFAFSWILDQFPKWFPIDRETYLDRLSFRYEREGEPNMLSPVDIFVSTV 340


>dbj|BAM05574.1| cellulose synthase 3, partial [Eucalyptus pyrocarpa]
           gi|383081841|dbj|BAM05575.1| cellulose synthase 3,
           partial [Eucalyptus pilularis]
          Length = 473

 Score =  362 bits (929), Expect = 4e-98
 Identities = 171/230 (74%), Positives = 192/230 (83%)
 Frame = +2

Query: 44  FNLDDEQNKHAHLAEAMLHNKMSYGRGPDNDENAQFPPIITSAISRPVSGEFPISNHNHG 223
           FN++DEQNKH ++AEAMLH KMSYGRGP++D+NAQFP +I    SRPVSGEFPIS++ HG
Sbjct: 111 FNIEDEQNKHKYMAEAMLHGKMSYGRGPEDDDNAQFPSVIAGGRSRPVSGEFPISSYGHG 170

Query: 224 DPILSSTLHKRIHPYPVSEPGSARWDEKKEEGWKERKDDWKLKQGNLGXXXXXXXXXXXX 403
           +  + S+LHKRIHPYP+SEPGS RWDEKKE GWKER DDWKL+QGNLG            
Sbjct: 171 E--MPSSLHKRIHPYPISEPGSERWDEKKEGGWKERMDDWKLQQGNLGPEPDDINDPDMA 228

Query: 404 XXXXARQPLSRKVSIASSKINPYRMVIVIRLVVLAFFLRYRILNPVHDAIPLWLASVICE 583
               ARQPLSRKV IASSKINPYRMVIV RL +LAFFLRYRILNPVHDA  LWL S+ICE
Sbjct: 229 MIDEARQPLSRKVPIASSKINPYRMVIVARLAILAFFLRYRILNPVHDAFGLWLTSIICE 288

Query: 584 IWFACSWILDQFPKWYPIDRETYLDRLSLRYEREGEPSMLAAVDIFVSTV 733
           IWFA SWILDQFPKW+PIDRETYLDRLSLRYEREGEP+ML+ VD+FVSTV
Sbjct: 289 IWFAFSWILDQFPKWFPIDRETYLDRLSLRYEREGEPNMLSPVDVFVSTV 338


>gb|AEK31217.1| cellulose synthase A [Eucalyptus camaldulensis]
          Length = 1040

 Score =  362 bits (928), Expect = 6e-98
 Identities = 170/230 (73%), Positives = 192/230 (83%)
 Frame = +2

Query: 44  FNLDDEQNKHAHLAEAMLHNKMSYGRGPDNDENAQFPPIITSAISRPVSGEFPISNHNHG 223
           FN++DEQNKH ++AEAMLH KMSYGRGP++D+NAQFP +I    SRPVSGEFPIS++ HG
Sbjct: 111 FNIEDEQNKHKYMAEAMLHGKMSYGRGPEDDDNAQFPSVIAGGRSRPVSGEFPISSYGHG 170

Query: 224 DPILSSTLHKRIHPYPVSEPGSARWDEKKEEGWKERKDDWKLKQGNLGXXXXXXXXXXXX 403
           +  + S+LHKR+HPYP+SEPGS RWDEKKE GWKER DDWKL+QGNLG            
Sbjct: 171 E--MPSSLHKRVHPYPISEPGSERWDEKKEGGWKERMDDWKLQQGNLGPEPDDINDPDMA 228

Query: 404 XXXXARQPLSRKVSIASSKINPYRMVIVIRLVVLAFFLRYRILNPVHDAIPLWLASVICE 583
               ARQPLSRKV IASSKINPYRMVIV RL +LAFFLRYRILNPVHDA  LWL S+ICE
Sbjct: 229 MIDEARQPLSRKVPIASSKINPYRMVIVARLAILAFFLRYRILNPVHDAFGLWLTSIICE 288

Query: 584 IWFACSWILDQFPKWYPIDRETYLDRLSLRYEREGEPSMLAAVDIFVSTV 733
           IWFA SWILDQFPKW+PIDRETYLDRLSLRYEREGEP+ML+ VD+FVSTV
Sbjct: 289 IWFAFSWILDQFPKWFPIDRETYLDRLSLRYEREGEPNMLSPVDVFVSTV 338


>gb|ACT67415.1| cellulose synthase [Shorea parvifolia subsp. parvifolia]
          Length = 1040

 Score =  360 bits (925), Expect = 1e-97
 Identities = 174/231 (75%), Positives = 193/231 (83%), Gaps = 1/231 (0%)
 Frame = +2

Query: 44  FNLDDEQNKHAHLAEAMLHNKMSYGRGPDNDENAQFPPIITSAISRPVSGEFPI-SNHNH 220
           FN++DEQNKH HL EAMLH KMSYGRGP++DE+AQFPP+IT   SRPVSGEFPI + H +
Sbjct: 111 FNIEDEQNKHKHLVEAMLHGKMSYGRGPEDDESAQFPPVITGGRSRPVSGEFPIGAAHAY 170

Query: 221 GDPILSSTLHKRIHPYPVSEPGSARWDEKKEEGWKERKDDWKLKQGNLGXXXXXXXXXXX 400
           G+ I SS+LHKR+HPYP+ EPGSAR DEKKE GWKER DDWKL+QGNL            
Sbjct: 171 GEQISSSSLHKRVHPYPMEEPGSARGDEKKEGGWKERMDDWKLQQGNLVPEPEDANDPDM 230

Query: 401 XXXXXARQPLSRKVSIASSKINPYRMVIVIRLVVLAFFLRYRILNPVHDAIPLWLASVIC 580
                ARQPLSRKV IASSKINPYRM+IV RLV+LAFFLRYRILNPVHDAI LWL S++C
Sbjct: 231 ALIDEARQPLSRKVPIASSKINPYRMLIVARLVILAFFLRYRILNPVHDAIGLWLTSIVC 290

Query: 581 EIWFACSWILDQFPKWYPIDRETYLDRLSLRYEREGEPSMLAAVDIFVSTV 733
           EIWFA SWILDQFPKW+PIDRETYLDRLSLRYEREGEP+MLA VDIFVSTV
Sbjct: 291 EIWFAFSWILDQFPKWFPIDRETYLDRLSLRYEREGEPNMLAPVDIFVSTV 341


>ref|XP_003522926.1| PREDICTED: cellulose synthase A catalytic subunit 7
           [UDP-forming]-like [Glycine max]
          Length = 1039

 Score =  360 bits (924), Expect = 2e-97
 Identities = 170/231 (73%), Positives = 197/231 (85%), Gaps = 1/231 (0%)
 Frame = +2

Query: 44  FNLDDEQNKHAHLAEAMLHNKMSYGRGPDNDENAQFP-PIITSAISRPVSGEFPISNHNH 220
           FN+D++ NKH  +AEAMLH KMSYGRGP++DEN+QFP P+I    SRPVSGEFP+S++ +
Sbjct: 111 FNIDEQTNKHGQVAEAMLHGKMSYGRGPEDDENSQFPTPVIAGGRSRPVSGEFPLSSNVY 170

Query: 221 GDPILSSTLHKRIHPYPVSEPGSARWDEKKEEGWKERKDDWKLKQGNLGXXXXXXXXXXX 400
           GD +LSS+LHKR+HPYPVSEPGSARWDEKKE+GWK+R DDWKL+QGNLG           
Sbjct: 171 GDQMLSSSLHKRVHPYPVSEPGSARWDEKKEDGWKDRMDDWKLQQGNLGPEPDEDPDAAM 230

Query: 401 XXXXXARQPLSRKVSIASSKINPYRMVIVIRLVVLAFFLRYRILNPVHDAIPLWLASVIC 580
                ARQPLSRKV IASSKINPYRMVIV RLV+LAFFLRYR++NPVHDA+ LWL S+IC
Sbjct: 231 LDE--ARQPLSRKVPIASSKINPYRMVIVARLVILAFFLRYRLMNPVHDALGLWLTSIIC 288

Query: 581 EIWFACSWILDQFPKWYPIDRETYLDRLSLRYEREGEPSMLAAVDIFVSTV 733
           EIWFA SWILDQFPKW+PIDRETYLDRLS+RYEREGEP+MLA VD+FVSTV
Sbjct: 289 EIWFAFSWILDQFPKWFPIDRETYLDRLSIRYEREGEPNMLAPVDVFVSTV 339


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