BLASTX nr result

ID: Coptis24_contig00021844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021844
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145461.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...    84   9e-29
ref|XP_003546242.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...    87   1e-28
ref|XP_003535051.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...    83   2e-27
ref|NP_001151750.1| LOC100285385 [Zea mays] gi|195649509|gb|ACG4...    83   2e-27
tpg|DAA58644.1| TPA: hypothetical protein ZEAMMB73_094988, parti...    83   2e-27

>ref|XP_004145461.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Cucumis
           sativus] gi|449513053|ref|XP_004164215.1| PREDICTED:
           protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Cucumis
           sativus]
          Length = 809

 Score = 83.6 bits (205), Expect(2) = 9e-29
 Identities = 47/94 (50%), Positives = 65/94 (69%)
 Frame = -2

Query: 360 LSVVRN*LSELKAKY*KQLSEALIEPVDSLLHVSGRDTLASIRRLL*CETESAVAKFSTS 181
           LS+    LS + A Y K+L+EAL +PV SLL  SG+D  ASIR++L  ETE  V+KFS  
Sbjct: 445 LSIQNEKLSGMIASYEKRLTEALSQPVRSLLEASGKDAWASIRKILQHETEITVSKFSAD 504

Query: 180 LSGFELDQATYNGMVLDLR*FVRSLVEKKAKEEA 79
           ++GFELD+   + MV +LR   R++VE +A+EEA
Sbjct: 505 IAGFELDKDKVDNMVQNLRNHSRNVVENRAREEA 538



 Score = 68.6 bits (166), Expect(2) = 9e-29
 Identities = 32/59 (54%), Positives = 45/59 (76%)
 Frame = -1

Query: 517 ENHAFAASVRVSTQYCMFEFDKRAADAAI*QANLDPTKVREKLRRDIEAHAASVRSEKL 341
           +   FA++VR  T+ CM EFD+ +ADAA+ QAN DP+K REKL +DI+ HA S+++EKL
Sbjct: 394 DGEGFASTVRKCTKICMLEFDQGSADAAVQQANWDPSKFREKLCQDIDRHALSIQNEKL 452


>ref|XP_003546242.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Glycine
           max]
          Length = 829

 Score = 87.4 bits (215), Expect(2) = 1e-28
 Identities = 46/89 (51%), Positives = 63/89 (70%)
 Frame = -2

Query: 339 LSELKAKY*KQLSEALIEPVDSLLHVSGRDTLASIRRLL*CETESAVAKFSTSLSGFELD 160
           LSE+ A + K+L++AL EPV+SL    G+DT  SIR LL  ETE AV++FS S++GFELD
Sbjct: 452 LSEITANFEKKLAKALTEPVESLFEAGGKDTWLSIRELLKRETEIAVSEFSASVAGFELD 511

Query: 159 QATYNGMVLDLR*FVRSLVEKKAKEEAGR 73
           + T   M   LR + R +VE KA++EAG+
Sbjct: 512 EETVERMQQSLRDYARKVVENKARDEAGK 540



 Score = 64.3 bits (155), Expect(2) = 1e-28
 Identities = 32/55 (58%), Positives = 42/55 (76%)
 Frame = -1

Query: 505 FAASVRVSTQYCMFEFDKRAADAAI*QANLDPTKVREKLRRDIEAHAASVRSEKL 341
           FA+SVR  TQ  M +FDK +ADAA+ QAN   +KVR+KL RDI++H +S+RS KL
Sbjct: 398 FASSVRTWTQSTMLQFDKASADAAVRQANWGASKVRDKLHRDIDSHTSSMRSTKL 452


>ref|XP_003535051.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Glycine
           max]
          Length = 829

 Score = 83.2 bits (204), Expect(2) = 2e-27
 Identities = 43/89 (48%), Positives = 62/89 (69%)
 Frame = -2

Query: 339 LSELKAKY*KQLSEALIEPVDSLLHVSGRDTLASIRRLL*CETESAVAKFSTSLSGFELD 160
           L E+   + K+L++AL EPV+SL    G+D+  SIR LL  ETE+AV++FS S++GFELD
Sbjct: 452 LLEITTNFEKKLAKALAEPVESLFEAGGKDSWLSIRELLKRETETAVSEFSASVAGFELD 511

Query: 159 QATYNGMVLDLR*FVRSLVEKKAKEEAGR 73
           + T   M   LR + R +VE KA++EAG+
Sbjct: 512 EETVGRMQQSLRDYARKVVENKARDEAGK 540



 Score = 64.7 bits (156), Expect(2) = 2e-27
 Identities = 34/56 (60%), Positives = 42/56 (75%)
 Frame = -1

Query: 505 FAASVRVSTQYCMFEFDKRAADAAI*QANLDPTKVREKLRRDIEAHAASVRSEKLI 338
           FA+SVR  TQ  M EFDK +ADAAI QAN   +KVR+KL RDI++H +SV S KL+
Sbjct: 398 FASSVRTWTQSTMLEFDKASADAAIRQANWGASKVRDKLHRDIDSHTSSVCSAKLL 453


>ref|NP_001151750.1| LOC100285385 [Zea mays] gi|195649509|gb|ACG44222.1| protein SEY1
           [Zea mays]
          Length = 809

 Score = 82.8 bits (203), Expect(2) = 2e-27
 Identities = 47/89 (52%), Positives = 64/89 (71%)
 Frame = -2

Query: 339 LSELKAKY*KQLSEALIEPVDSLLHVSGRDTLASIRRLL*CETESAVAKFSTSLSGFELD 160
           LSEL AKY  QL++AL EPV+SLL  +  DT  +IR+LL  ET++AV+   +++S FELD
Sbjct: 450 LSELCAKYEAQLTKALAEPVESLLDSASEDTWPAIRKLLQRETKTAVSGLQSAVSAFELD 509

Query: 159 QATYNGMVLDLR*FVRSLVEKKAKEEAGR 73
           +AT   +++ L    RS+VE KAKEEAGR
Sbjct: 510 EATEKELLVKLEKHGRSVVESKAKEEAGR 538



 Score = 64.7 bits (156), Expect(2) = 2e-27
 Identities = 34/59 (57%), Positives = 42/59 (71%)
 Frame = -1

Query: 517 ENHAFAASVRVSTQYCMFEFDKRAADAAI*QANLDPTKVREKLRRDIEAHAASVRSEKL 341
           E   FAA+ R  TQ  + +FDK + DAAI Q N D +KV++KLRRDIEAH ASVR+ KL
Sbjct: 392 EKEGFAAAARNCTQTFLEKFDKGSEDAAIQQVNWDTSKVKDKLRRDIEAHVASVRAAKL 450


>tpg|DAA58644.1| TPA: hypothetical protein ZEAMMB73_094988, partial [Zea mays]
          Length = 247

 Score = 82.8 bits (203), Expect(2) = 2e-27
 Identities = 47/89 (52%), Positives = 64/89 (71%)
 Frame = -2

Query: 339 LSELKAKY*KQLSEALIEPVDSLLHVSGRDTLASIRRLL*CETESAVAKFSTSLSGFELD 160
           LSEL AKY  QL++AL EPV+SLL  +  DT  +IR+LL  ET++AV+   +++S FELD
Sbjct: 112 LSELCAKYEAQLTKALAEPVESLLDSASEDTWPAIRKLLQRETKTAVSGLQSAVSAFELD 171

Query: 159 QATYNGMVLDLR*FVRSLVEKKAKEEAGR 73
           +AT   +++ L    RS+VE KAKEEAGR
Sbjct: 172 EATEKELLVKLEKHGRSVVESKAKEEAGR 200



 Score = 64.7 bits (156), Expect(2) = 2e-27
 Identities = 34/59 (57%), Positives = 42/59 (71%)
 Frame = -1

Query: 517 ENHAFAASVRVSTQYCMFEFDKRAADAAI*QANLDPTKVREKLRRDIEAHAASVRSEKL 341
           E   FAA+ R  TQ  + +FDK + DAAI Q N D +KV++KLRRDIEAH ASVR+ KL
Sbjct: 54  EKEGFAAAARNCTQTFLEKFDKGSEDAAIQQVNWDTSKVKDKLRRDIEAHVASVRAAKL 112


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