BLASTX nr result

ID: Coptis24_contig00021841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021841
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518814.1| conserved hypothetical protein [Ricinus comm...   115   5e-24
emb|CBI27473.3| unnamed protein product [Vitis vinifera]              108   4e-22
ref|XP_002311577.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21
ref|XP_002272777.2| PREDICTED: uncharacterized protein LOC100261...   103   1e-20
ref|XP_004167709.1| PREDICTED: uncharacterized protein LOC101225...    97   1e-18

>ref|XP_002518814.1| conserved hypothetical protein [Ricinus communis]
           gi|223542195|gb|EEF43739.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 304

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/80 (67%), Positives = 63/80 (78%)
 Frame = +2

Query: 14  NMGTYSLMMHHRDQNDQISLEGAGGTTRHLLDENAQVFSHITANLSTYKIQENIDLFSRT 193
           NM  Y LMMHH DQ + +S EG  GT+RHLL++N Q FS ITANLST+K+Q+NIDLF RT
Sbjct: 185 NMALYPLMMHHPDQGEPLSFEGISGTSRHLLEQNVQAFSKITANLSTFKLQDNIDLFCRT 244

Query: 194 WNNILAIINDMRAMPGIMSQ 253
             NI AI+NDMR MPGIMSQ
Sbjct: 245 RTNITAILNDMRGMPGIMSQ 264


>emb|CBI27473.3| unnamed protein product [Vitis vinifera]
          Length = 263

 Score =  108 bits (271), Expect = 4e-22
 Identities = 51/82 (62%), Positives = 64/82 (78%)
 Frame = +2

Query: 5   PAANMGTYSLMMHHRDQNDQISLEGAGGTTRHLLDENAQVFSHITANLSTYKIQENIDLF 184
           P  ++ TYSLMM H DQN+ +  E    T +HLL++NAQVF+ ITANLST+K+Q+NIDLF
Sbjct: 141 PPLDVATYSLMMQHMDQNEHLPCEALNDTAKHLLEQNAQVFNQITANLSTFKLQDNIDLF 200

Query: 185 SRTWNNILAIINDMRAMPGIMS 250
            RT +NI AI+NDMR MPGIMS
Sbjct: 201 CRTRDNITAILNDMRDMPGIMS 222


>ref|XP_002311577.1| predicted protein [Populus trichocarpa] gi|222851397|gb|EEE88944.1|
           predicted protein [Populus trichocarpa]
          Length = 256

 Score =  104 bits (260), Expect = 7e-21
 Identities = 51/80 (63%), Positives = 63/80 (78%)
 Frame = +2

Query: 14  NMGTYSLMMHHRDQNDQISLEGAGGTTRHLLDENAQVFSHITANLSTYKIQENIDLFSRT 193
           N+ +Y LMMHH DQ++ +  EG  GTTR LLD+NAQ FS I+ANLST+K+Q+NID F  T
Sbjct: 138 NVASYPLMMHHTDQSEPMPFEGISGTTR-LLDQNAQAFSQISANLSTFKLQDNIDFFCYT 196

Query: 194 WNNILAIINDMRAMPGIMSQ 253
            NNI AI+NDMR MPGIMS+
Sbjct: 197 RNNITAILNDMREMPGIMSR 216


>ref|XP_002272777.2| PREDICTED: uncharacterized protein LOC100261483 [Vitis vinifera]
          Length = 300

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/84 (60%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
 Frame = +2

Query: 5   PAANMGTYSLMMHHRDQNDQISLE--GAGGTTRHLLDENAQVFSHITANLSTYKIQENID 178
           P  ++ TYSLMM H DQN+ +  E      T +HLL++NAQVF+ ITANLST+K+Q+NID
Sbjct: 176 PPLDVATYSLMMQHMDQNEHLPCEVSALNDTAKHLLEQNAQVFNQITANLSTFKLQDNID 235

Query: 179 LFSRTWNNILAIINDMRAMPGIMS 250
           LF RT +NI AI+NDMR MPGIMS
Sbjct: 236 LFCRTRDNITAILNDMRDMPGIMS 259


>ref|XP_004167709.1| PREDICTED: uncharacterized protein LOC101225796 [Cucumis sativus]
          Length = 282

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/83 (55%), Positives = 60/83 (72%)
 Frame = +2

Query: 5   PAANMGTYSLMMHHRDQNDQISLEGAGGTTRHLLDENAQVFSHITANLSTYKIQENIDLF 184
           P  +MG YS MM H ++ +++  E       HLL++NAQ FS IT+NLS YK+Q+NIDLF
Sbjct: 179 PGPSMGVYSHMMQHVNRKERMPSEEISSAAAHLLEQNAQAFSQITSNLSMYKLQDNIDLF 238

Query: 185 SRTWNNILAIINDMRAMPGIMSQ 253
            RT NNI+AI+NDMR  PGIMS+
Sbjct: 239 CRTRNNIIAILNDMRDTPGIMSK 261


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