BLASTX nr result

ID: Coptis24_contig00021834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021834
         (1418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283821.1| PREDICTED: uncharacterized protein LOC100256...   109   2e-21
ref|XP_004150567.1| PREDICTED: guanine nucleotide-binding protei...   106   2e-20
ref|XP_002517046.1| conserved hypothetical protein [Ricinus comm...   104   6e-20
ref|XP_002321907.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-19
ref|XP_003556393.1| PREDICTED: uncharacterized protein LOC100812...    99   3e-18

>ref|XP_002283821.1| PREDICTED: uncharacterized protein LOC100256197 [Vitis vinifera]
           gi|297737134|emb|CBI26335.3| unnamed protein product
           [Vitis vinifera]
          Length = 105

 Score =  109 bits (272), Expect = 2e-21
 Identities = 51/82 (62%), Positives = 55/82 (67%)
 Frame = +1

Query: 346 DTRGKHRILAELKRXXXXXXXXXXXXXXXXXXXKVSAACQQLLLNVESKPDPLLPVTTGP 525
           DTRGKHRI AELKR                   + S AC++LL  VES+PDPLLPVT GP
Sbjct: 23  DTRGKHRITAELKRLEQEARFLEEELEQLEKTERASDACRELLSIVESRPDPLLPVTYGP 82

Query: 526 TNPSWDRWFEGPQDSQGCRCWI 591
            NP WDRWFEGPQDSQGCRCWI
Sbjct: 83  ANPIWDRWFEGPQDSQGCRCWI 104


>ref|XP_004150567.1| PREDICTED: guanine nucleotide-binding protein subunit gamma 2-like
           [Cucumis sativus] gi|449520986|ref|XP_004167513.1|
           PREDICTED: guanine nucleotide-binding protein subunit
           gamma 2-like [Cucumis sativus]
          Length = 104

 Score =  106 bits (264), Expect = 2e-20
 Identities = 47/82 (57%), Positives = 55/82 (67%)
 Frame = +1

Query: 346 DTRGKHRILAELKRXXXXXXXXXXXXXXXXXXXKVSAACQQLLLNVESKPDPLLPVTTGP 525
           DTRGKHRI AE+KR                   K S  C+++L NVE++PDPLLP+T GP
Sbjct: 22  DTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKCKEMLSNVETRPDPLLPLTHGP 81

Query: 526 TNPSWDRWFEGPQDSQGCRCWI 591
            NP WDRWFEGPQDS+GCRCWI
Sbjct: 82  INPLWDRWFEGPQDSKGCRCWI 103


>ref|XP_002517046.1| conserved hypothetical protein [Ricinus communis]
           gi|223543681|gb|EEF45209.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 106

 Score =  104 bits (259), Expect = 6e-20
 Identities = 46/82 (56%), Positives = 55/82 (67%)
 Frame = +1

Query: 346 DTRGKHRILAELKRXXXXXXXXXXXXXXXXXXXKVSAACQQLLLNVESKPDPLLPVTTGP 525
           DTRGKHRI AE+KR                   K SAAC+++L NV+ +PDPLLP+T G 
Sbjct: 24  DTRGKHRIQAEVKRLEQETRFLEQELEQLDKMEKASAACKEMLSNVDIRPDPLLPITKGL 83

Query: 526 TNPSWDRWFEGPQDSQGCRCWI 591
            NP WDRWFEGPQ+SQGCRCW+
Sbjct: 84  LNPLWDRWFEGPQESQGCRCWV 105


>ref|XP_002321907.1| predicted protein [Populus trichocarpa] gi|222868903|gb|EEF06034.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score =  103 bits (256), Expect = 1e-19
 Identities = 46/82 (56%), Positives = 54/82 (65%)
 Frame = +1

Query: 346 DTRGKHRILAELKRXXXXXXXXXXXXXXXXXXXKVSAACQQLLLNVESKPDPLLPVTTGP 525
           DTRGKHRI AELKR                   K S AC+++L NVE+ PDPLLP+T GP
Sbjct: 27  DTRGKHRIQAELKRIEQEARFLEEELEQLDKLEKASTACKEMLNNVETIPDPLLPITNGP 86

Query: 526 TNPSWDRWFEGPQDSQGCRCWI 591
            NP WDRWFEGP++S+GC CWI
Sbjct: 87  MNPLWDRWFEGPRESKGCSCWI 108


>ref|XP_003556393.1| PREDICTED: uncharacterized protein LOC100812916 isoform 1 [Glycine
           max]
          Length = 106

 Score = 99.0 bits (245), Expect = 3e-18
 Identities = 46/83 (55%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
 Frame = +1

Query: 346 DTRGKHRILAELKRXXXXXXXXXXXXXXXXXXXKVSAACQQLLLNVESKPDPLLPVTTGP 525
           DTRGKHRI AELKR                   K S +C+ +L+NVE+KPDPLLP + GP
Sbjct: 23  DTRGKHRIHAELKRLEQEARFLEEELEQLERMEKASTSCKIMLINVETKPDPLLPSSVGP 82

Query: 526 TNPSWDRWFEGPQDSQG-CRCWI 591
            +P+WDRWFEGPQDS+  CRCWI
Sbjct: 83  LSPTWDRWFEGPQDSKSCCRCWI 105


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