BLASTX nr result

ID: Coptis24_contig00021829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021829
         (971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533524.1| hypothetical protein RCOM_1007940 [Ricinus c...   114   4e-23
emb|CAN69476.1| hypothetical protein VITISV_017346 [Vitis vinife...    88   3e-15
ref|XP_002310442.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-14
ref|XP_002889574.1| hypothetical protein ARALYDRAFT_470603 [Arab...    84   7e-14
ref|NP_001030977.1| uncharacterized protein [Arabidopsis thalian...    83   9e-14

>ref|XP_002533524.1| hypothetical protein RCOM_1007940 [Ricinus communis]
           gi|223526606|gb|EEF28854.1| hypothetical protein
           RCOM_1007940 [Ricinus communis]
          Length = 366

 Score =  114 bits (285), Expect = 4e-23
 Identities = 83/268 (30%), Positives = 132/268 (49%), Gaps = 10/268 (3%)
 Frame = -1

Query: 920 LSTDDASSGIWELDKMDACDPLI--DIRTGWDVFQSEFPSPSYMRRCYXXXXXXXXXXST 747
           +S  D++S +  L  +D  D  +  D     D   S FPSPS    C           S 
Sbjct: 101 ISDTDSTSFLDCLVNLDGEDSKLISDEELDMDYLPSGFPSPS----CNNSIYNDSTPNSE 156

Query: 746 LHEXXXXXXXXXXXXXXXXQAAECDSDEPLFRPPESKFSWNSEVLFDCFCMSPRRVGSEL 567
           +++                   +  +DEPLF P E K  W+SE  +  F MSPR+  +EL
Sbjct: 157 INKHTRYGMFSEHNSSDSLHLEDFSTDEPLFWPSECKRDWSSEETWKFFSMSPRKYTTEL 216

Query: 566 GK----CERFSAPKSVILRLQSRKFRDQKEEFSS----SRSQVPTTFCSKIKHEKKNMRR 411
           G     C + +  K  +L++ SRK   ++ +FSS    +   +     S   + KK    
Sbjct: 217 GMPRKTCSKSAESKFHVLKMDSRKDCRRRLDFSSVSIVAVKMLEHKQRSNTNYSKKIKPA 276

Query: 410 TSNMPSKLRISVQDSTEKRPLEIRDDLDEPTRENIANDVLITDYRELLEDCFLSIKDVPI 231
           +S  PS+LR S + S +  P+E+ DD+ +     +A   L   + +LL+D  +S +++PI
Sbjct: 277 SSTTPSRLRRSTEHSAKIVPIEMEDDIKQAKNREVAVAKLNCIHVDLLQDDIISNEELPI 336

Query: 230 ETLVGLDEFNGHEGVNGNFDENSFSLDE 147
           ETL+GL EF+GHEGV+  F+E+ F+LD+
Sbjct: 337 ETLLGLGEFDGHEGVDSEFNEDVFTLDD 364


>emb|CAN69476.1| hypothetical protein VITISV_017346 [Vitis vinifera]
           gi|297743765|emb|CBI36648.3| unnamed protein product
           [Vitis vinifera]
          Length = 434

 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 79/271 (29%), Positives = 111/271 (40%), Gaps = 4/271 (1%)
 Frame = -1

Query: 947 SDCESSWMSLSTDDASSGIWELDKMDACDPLIDIRTGWDVFQSEFPSPSYMRRCYXXXXX 768
           SD    W+SL   D     W  D     D L           S+FPSPSY          
Sbjct: 215 SDRTGFWVSLVDLDEEDFKWISDSGSVLDSLQS---------SDFPSPSYKT-------- 257

Query: 767 XXXXXSTLHEXXXXXXXXXXXXXXXXQAAECDSDEPLFRPPESKFSWNSEVLFDCFCMSP 588
                                        + ++DE LF P E K  W+S   +DCF MSP
Sbjct: 258 ----------------ISSSGGSAAEDLEDFNTDELLFWPFEQKPDWSSGN-WDCFSMSP 300

Query: 587 RR----VGSELGKCERFSAPKSVILRLQSRKFRDQKEEFSSSRSQVPTTFCSKIKHEKKN 420
           R+      +  G   R + P  V  RL             +S S        K +  KK 
Sbjct: 301 RKNSYLTNAASGPHNRKTDPNEVSRRL-----------VFTSGSTASKILEWKQRSNKKG 349

Query: 419 MRRTSNMPSKLRISVQDSTEKRPLEIRDDLDEPTRENIANDVLITDYRELLEDCFLSIKD 240
           + RTS  PS L    + S E  P +  +++ EPT E + N + + +        F S ++
Sbjct: 350 VWRTSTTPSSLSKPAKTSEETVPSDSDNNIIEPTEEKVLNQIFLEE--------FASNEE 401

Query: 239 VPIETLVGLDEFNGHEGVNGNFDENSFSLDE 147
           +PIETL+GLDEF+GHEGV+  F+++ F LD+
Sbjct: 402 LPIETLLGLDEFDGHEGVDLEFNKDDFFLDQ 432


>ref|XP_002310442.1| predicted protein [Populus trichocarpa] gi|222853345|gb|EEE90892.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 78/278 (28%), Positives = 118/278 (42%), Gaps = 9/278 (3%)
 Frame = -1

Query: 953 NSSDCESSWMSLSTDDASSGIWELDKMDACDPLIDIRTGWDVFQSEFPSPSYMRRCYXXX 774
           +S  C S    L     S  +  LD  D+     D     D+ +S FPSPS  R      
Sbjct: 209 DSPSCSSRTSDLDGMSFSVSLLSLDGDDS-KWTSDTELESDILRSSFPSPSCWRSWSSEA 267

Query: 773 XXXXXXXSTLHEXXXXXXXXXXXXXXXXQAAEC----DSDEPLFRPPESKFSWNSEVLFD 606
                  ST  +                  AE     ++D PLF P + K  WNSE  + 
Sbjct: 268 FSSSSNVSTPGKFQDGHLHRDLSLENSSSEAEVLKDFNTDGPLFWPFDKKLDWNSEEDWK 327

Query: 605 CFCMSPRRVGSELGKCERFSAPKSVIL-----RLQSRKFRDQKEEFSSSRSQVPTTFCSK 441
           CF MSPR+   +L    +  + KSV +     R+ S+    ++  FSS  +        +
Sbjct: 328 CFAMSPRK--DKLSISPQRISSKSVEMKFHDSRVDSKMVCRRRLVFSSGSAASNIMEKKQ 385

Query: 440 IKHEKKNMRRTSNMPSKLRISVQDSTEKRPLEIRDDLDEPTRENIANDVLITDYRELLED 261
            +    + ++ ++MPS+L+ SV+D                    I    + +    L +D
Sbjct: 386 RRDNNSSTKKMNSMPSRLKKSVKDG------------------RIPTPKVDSGNTNLSQD 427

Query: 260 CFLSIKDVPIETLVGLDEFNGHEGVNGNFDENSFSLDE 147
            F S + +PIE L+GLDEF+GHEGV+  F+E  FSLD+
Sbjct: 428 DFASNRKLPIEILLGLDEFDGHEGVDSEFNEGVFSLDD 465


>ref|XP_002889574.1| hypothetical protein ARALYDRAFT_470603 [Arabidopsis lyrata subsp.
           lyrata] gi|297335416|gb|EFH65833.1| hypothetical protein
           ARALYDRAFT_470603 [Arabidopsis lyrata subsp. lyrata]
          Length = 460

 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 62/200 (31%), Positives = 92/200 (46%), Gaps = 26/200 (13%)
 Frame = -1

Query: 668 DEPLFRPPESKFSWNSEVLFDCFCMSPRRVGSELGKCERFSAPKSVILRLQSRKFRDQKE 489
           DEPLF P E +F W  E +   F MSPRR      K    S+P+S+  +L   +  D K+
Sbjct: 261 DEPLFWPYEQRFDWTPEDILKHFSMSPRRKKLFNAKVSAGSSPRSMRAQLLQARKLDLKD 320

Query: 488 EFSSSRSQV---PTTFCSKIKHEKKNMRRTSN--------------------MPSKLRIS 378
              S R  V   P T  SKI   K+ +   SN                    +PS+LR S
Sbjct: 321 --GSKRKLVFNGPLTNASKIPELKRTISNNSNKKNDSIKNEPIRNCVKRNKSLPSRLRKS 378

Query: 377 VQDSTEKRPLEIRDDLDEPTRENI---ANDVLITDYRELLEDCFLSIKDVPIETLVGLDE 207
            +  ++  P E+ +++    R  +   A  ++    + +LED F  I D  IE  VGL E
Sbjct: 379 SKTCSKVVPFEVAEEVIAVERAKVEITARKLINRRSKTMLEDDFALINDFSIENAVGLGE 438

Query: 206 FNGHEGVNGNFDENSFSLDE 147
           F G EG++  F+ ++F  D+
Sbjct: 439 FKGREGIDSEFNSDTFLFDD 458


>ref|NP_001030977.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6850319|gb|AAF29396.1|AC009999_16 Contains simlarity
           to a hypothetical protein from Arabidopsis thaliana
           gb|AC007169.7 [Arabidopsis thaliana]
           gi|98961963|gb|ABF59311.1| unknown protein [Arabidopsis
           thaliana] gi|332189793|gb|AEE27914.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 457

 Score = 83.2 bits (204), Expect = 9e-14
 Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 23/197 (11%)
 Frame = -1

Query: 668 DEPLFRPPESKFSWNSEVLFDCFCMSPRRVGSELGKCERFSAPKSVILRLQSRKFRDQKE 489
           DEPLF P E +F W  E +   F MSPRR      K    S+P+S+  +L   +  D K+
Sbjct: 261 DEPLFWPYEQRFDWTPEDILKHFSMSPRRKKLLNAKVSAGSSPRSMRAQLLQARKLDLKD 320

Query: 488 EFSSSRSQV---PTTFCSKIKHEKKN-----------------MRRTSNMPSKLRISVQD 369
              S R  V   P T  +KI   K+N                 ++R  ++PS+LR S + 
Sbjct: 321 --GSKRKLVFNGPLTNAAKIPELKRNNSNKKNDSIKNEPIRNCVKRNKSLPSRLRNSSKT 378

Query: 368 STEKRPLEIRDDLDEPTRENI---ANDVLITDYRELLEDCFLSIKDVPIETLVGLDEFNG 198
            ++  P E+ +++    R  +   A  ++    + +LED F  + D  IE  VGL EF G
Sbjct: 379 CSKVVPFEVAEEVIAAERAKVEITARKLINRRSKTMLEDDFSLMNDFSIENAVGLGEFKG 438

Query: 197 HEGVNGNFDENSFSLDE 147
            EG++  F+ + F  D+
Sbjct: 439 REGIDSEFNSDIFLFDD 455


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