BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021827
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat...    75   6e-12
ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    73   3e-11
ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat...    73   3e-11
ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779...    73   3e-11
ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat...    73   3e-11

>ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 34/62 (54%), Positives = 46/62 (74%)
 Frame = -3

Query: 199 IVTLNTLINCYSCMGRVDFGFSVLGNILKRGFQPNAFTFNSLLKGLFLEGKSAPALELFD 20
           ++TLN LINC+  MG++ FGFSVL  ILKRG+QP+  TF +L+KGL L+G+   AL   D
Sbjct: 94  LITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHD 153

Query: 19  KI 14
           K+
Sbjct: 154 KL 155


>ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 450

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/60 (55%), Positives = 45/60 (75%)
 Frame = -3

Query: 193 TLNTLINCYSCMGRVDFGFSVLGNILKRGFQPNAFTFNSLLKGLFLEGKSAPALELFDKI 14
           TLN L+NC+  MG+++FGFSVL  ILKRG+QP+  TF +L+KGL L+G+   AL   DK+
Sbjct: 107 TLNILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKL 166


>ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/62 (53%), Positives = 45/62 (72%)
 Frame = -3

Query: 199 IVTLNTLINCYSCMGRVDFGFSVLGNILKRGFQPNAFTFNSLLKGLFLEGKSAPALELFD 20
           ++TLN LINC+  MG++ FGFSVL  ILKRG+ P+  T N+L+KGL L+G+   AL   D
Sbjct: 94  LITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHD 153

Query: 19  KI 14
           K+
Sbjct: 154 KL 155


>ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/62 (53%), Positives = 45/62 (72%)
 Frame = -3

Query: 199 IVTLNTLINCYSCMGRVDFGFSVLGNILKRGFQPNAFTFNSLLKGLFLEGKSAPALELFD 20
           ++TLN LINC+  MG++ FGFSVL  ILKRG+ P+  T N+L+KGL L+G+   AL   D
Sbjct: 94  LITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHD 153

Query: 19  KI 14
           K+
Sbjct: 154 KL 155



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/62 (48%), Positives = 42/62 (67%)
 Frame = -3

Query: 199  IVTLNTLINCYSCMGRVDFGFSVLGNILKRGFQPNAFTFNSLLKGLFLEGKSAPALELFD 20
            + TLN LINC+  MG++ F FS+L  ILKRG+ P+  TF +L+ GL L+G+   AL   D
Sbjct: 961  LFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHD 1020

Query: 19   KI 14
            K+
Sbjct: 1021 KL 1022


>ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/62 (53%), Positives = 45/62 (72%)
 Frame = -3

Query: 199 IVTLNTLINCYSCMGRVDFGFSVLGNILKRGFQPNAFTFNSLLKGLFLEGKSAPALELFD 20
           ++TLN LINC+  MG++ FGFSVL  ILKRG+ P+  T N+L+KGL L+G+   AL   D
Sbjct: 94  LITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHD 153

Query: 19  KI 14
           K+
Sbjct: 154 KL 155