BLASTX nr result

ID: Coptis24_contig00021820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021820
         (1166 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274018.1| PREDICTED: uncharacterized protein At2g39795...   215   1e-53
ref|XP_002285343.1| PREDICTED: uncharacterized protein At2g39795...   212   2e-52
emb|CBI21087.3| unnamed protein product [Vitis vinifera]              212   2e-52
ref|XP_004163551.1| PREDICTED: uncharacterized protein At2g39795...   209   1e-51
ref|XP_004135870.1| PREDICTED: uncharacterized protein At2g39795...   208   2e-51

>ref|XP_002274018.1| PREDICTED: uncharacterized protein At2g39795, mitochondrial [Vitis
           vinifera]
          Length = 239

 Score =  215 bits (548), Expect = 1e-53
 Identities = 124/264 (46%), Positives = 162/264 (61%), Gaps = 4/264 (1%)
 Frame = +3

Query: 33  MARLIQASRRTL-TSHYSLFHKTLIPQLNHLDSPQIKNPIFQTRNYISEMRKSTFEGHIL 209
           MAR+I+  RR L +S  S+  K   P   HL SP     IF TR+YISEMRKS FEG+IL
Sbjct: 3   MARIIRPLRRALISSSKSVTQKN--PNPLHLQSPI---SIFTTRSYISEMRKSAFEGNIL 57

Query: 210 RVLRNEIQYETEYAPPKQPVKEFNSFTVEDRAGEQWIRLTSKHENKEKIKVEVTMFDGAK 389
           R+LR+EI+YE E+  PK+ V E++SF VE+R GEQWIRL  K   KE+IK+EVTMFDG+ 
Sbjct: 58  RLLRSEIEYELEHFTPKELVVEYDSFVVEERPGEQWIRLKKKFGEKEEIKIEVTMFDGSI 117

Query: 390 NVNEDATE---NDEMQLHLSFIVDISKGEGSDIFQFVCSAWPDSIEIEKVFFVKRNGMPT 560
            V +         E++LH++ IV+ISKGEGSD+ +FVCSAWP S+EI  V    ++G P 
Sbjct: 118 PVEKSPDGIRIGQEVELHITLIVNISKGEGSDVLEFVCSAWPQSVEIVNVLVHGKDGRP- 176

Query: 561 LPNVEPDCNEIQNMFFLKRNGMPKLPYVGPDFKXXXXXXXXXXXXXXXXRGVNDDLAVFL 740
                   N++               Y+ P FK                RG++DDLA+F+
Sbjct: 177 --------NQL---------------YMSPKFKDLDDELQESLYEFLETRGIDDDLAIFV 213

Query: 741 HDYMMNKDRIELIRWMGKVKSFLE 812
           H+YM NKD+ E IRWMG VKSF+E
Sbjct: 214 HEYMKNKDKTEFIRWMGTVKSFIE 237


>ref|XP_002285343.1| PREDICTED: uncharacterized protein At2g39795, mitochondrial-like
           [Vitis vinifera]
          Length = 252

 Score =  212 bits (539), Expect = 2e-52
 Identities = 124/275 (45%), Positives = 163/275 (59%), Gaps = 15/275 (5%)
 Frame = +3

Query: 33  MARLIQASRRTLT------SHYSLFHKTLIPQLNHLDSPQIKNPIFQTRNYIS--EMRKS 188
           MAR I+A +RTL       S  +L H   +P L   ++      IFQTR+Y +  E+ KS
Sbjct: 3   MARFIRAVQRTLRLPPLQRSSKTLIHGLQLPSLQSHNATS--KFIFQTRSYQNSFEILKS 60

Query: 189 TFEGHILRVLRNEIQYETEYAPPKQPVKEFNSFTVEDRAGEQWIRLTSKHENKEKIKVEV 368
            FE ++LR+LRNEI+Y TE  PP QP + FNSFTVED  G+QW+ L SK   KE IK++V
Sbjct: 61  PFESNVLRILRNEIEYLTEDGPPNQPPRIFNSFTVEDHPGQQWVTLRSKFREKEDIKIDV 120

Query: 369 TMFDGA---KNVNEDATEND----EMQLHLSFIVDISKGEGSDIFQFVCSAWPDSIEIEK 527
           TMFDG      +++D  END    E++ H+S +VDISKGE  D+ +FVCSAWPDS+EI+K
Sbjct: 121 TMFDGCIFIPKLDDDFNENDITGQELRPHISLLVDISKGEDCDMLEFVCSAWPDSLEIQK 180

Query: 528 VFFVKRNGMPTLPNVEPDCNEIQNMFFLKRNGMPKLPYVGPDFKXXXXXXXXXXXXXXXX 707
           VF  +   +  LP                       P++GP FK                
Sbjct: 181 VFIYRHGRL--LPR----------------------PWLGPGFKSLDYKLQNALCEFLEE 216

Query: 708 RGVNDDLAVFLHDYMMNKDRIELIRWMGKVKSFLE 812
           RGVND+L+VFLH+YMMNKDR ELI+W+  VKSF+E
Sbjct: 217 RGVNDELSVFLHEYMMNKDRTELIQWLRNVKSFVE 251


>emb|CBI21087.3| unnamed protein product [Vitis vinifera]
          Length = 250

 Score =  212 bits (539), Expect = 2e-52
 Identities = 124/275 (45%), Positives = 163/275 (59%), Gaps = 15/275 (5%)
 Frame = +3

Query: 33  MARLIQASRRTLT------SHYSLFHKTLIPQLNHLDSPQIKNPIFQTRNYIS--EMRKS 188
           MAR I+A +RTL       S  +L H   +P L   ++      IFQTR+Y +  E+ KS
Sbjct: 1   MARFIRAVQRTLRLPPLQRSSKTLIHGLQLPSLQSHNATS--KFIFQTRSYQNSFEILKS 58

Query: 189 TFEGHILRVLRNEIQYETEYAPPKQPVKEFNSFTVEDRAGEQWIRLTSKHENKEKIKVEV 368
            FE ++LR+LRNEI+Y TE  PP QP + FNSFTVED  G+QW+ L SK   KE IK++V
Sbjct: 59  PFESNVLRILRNEIEYLTEDGPPNQPPRIFNSFTVEDHPGQQWVTLRSKFREKEDIKIDV 118

Query: 369 TMFDGA---KNVNEDATEND----EMQLHLSFIVDISKGEGSDIFQFVCSAWPDSIEIEK 527
           TMFDG      +++D  END    E++ H+S +VDISKGE  D+ +FVCSAWPDS+EI+K
Sbjct: 119 TMFDGCIFIPKLDDDFNENDITGQELRPHISLLVDISKGEDCDMLEFVCSAWPDSLEIQK 178

Query: 528 VFFVKRNGMPTLPNVEPDCNEIQNMFFLKRNGMPKLPYVGPDFKXXXXXXXXXXXXXXXX 707
           VF  +   +  LP                       P++GP FK                
Sbjct: 179 VFIYRHGRL--LPR----------------------PWLGPGFKSLDYKLQNALCEFLEE 214

Query: 708 RGVNDDLAVFLHDYMMNKDRIELIRWMGKVKSFLE 812
           RGVND+L+VFLH+YMMNKDR ELI+W+  VKSF+E
Sbjct: 215 RGVNDELSVFLHEYMMNKDRTELIQWLRNVKSFVE 249


>ref|XP_004163551.1| PREDICTED: uncharacterized protein At2g39795, mitochondrial-like
           [Cucumis sativus]
          Length = 249

 Score =  209 bits (531), Expect = 1e-51
 Identities = 124/272 (45%), Positives = 168/272 (61%), Gaps = 12/272 (4%)
 Frame = +3

Query: 33  MARLIQASRRTL--TSHYSLF--HKTLIPQLNHLDSPQIKNP----IF--QTRNYISEMR 182
           MARLI+  R+ L  +S  S F  HK+L  QL HL +P +  P    +F    R+YI++MR
Sbjct: 1   MARLIRPLRKCLQFSSSSSSFSSHKSLTTQL-HLQNPIVFPPENHYVFCKTLRHYIADMR 59

Query: 183 KSTFEGHILRVLRNEIQYETEYAPPKQPVKEFNSFTVEDRAGEQWIRLTSKHENKEKIKV 362
           +S FEG+ILR+LRNEI+YE + +PP QPV +F +FTV++R GEQWIRL  ++E KEKIK+
Sbjct: 60  RSAFEGNILRLLRNEIRYELDRSPPSQPVTKFGAFTVDERPGEQWIRLEREYEEKEKIKI 119

Query: 363 EVTMFDGAKNVNED--ATENDEMQLHLSFIVDISKGEGSDIFQFVCSAWPDSIEIEKVFF 536
           E TMFD +    +   ++   ++ LH++ IV I+KG GSD+ + +CSAWPDSIEI+++F 
Sbjct: 120 EATMFDQSIPAPKSGGSSSGKDVLLHITTIVHITKGGGSDVLKIMCSAWPDSIEIDRLFL 179

Query: 537 VKRNGMPTLPNVEPDCNEIQNMFFLKRNGMPKLPYVGPDFKXXXXXXXXXXXXXXXXRGV 716
             R G            EI          MP  PY GPDFK                RGV
Sbjct: 180 --RGG------------EI----------MPAQPYAGPDFKELDDDLQNSLYEYLEARGV 215

Query: 717 NDDLAVFLHDYMMNKDRIELIRWMGKVKSFLE 812
           +D LAVFLH+YM NKD+ E IRWM  +K+F+E
Sbjct: 216 DDQLAVFLHEYMKNKDKTEFIRWMETIKAFIE 247


>ref|XP_004135870.1| PREDICTED: uncharacterized protein At2g39795, mitochondrial-like
           [Cucumis sativus]
          Length = 249

 Score =  208 bits (530), Expect = 2e-51
 Identities = 123/272 (45%), Positives = 168/272 (61%), Gaps = 12/272 (4%)
 Frame = +3

Query: 33  MARLIQASRRTL--TSHYSLF--HKTLIPQLNHLDSPQIKNP----IF--QTRNYISEMR 182
           MARLI+  R+ L  +S  S F  HK+L  QL HL +P +  P    +F    R+YI++MR
Sbjct: 1   MARLIRPLRKCLQFSSSSSSFSSHKSLTTQL-HLQNPIVFPPENHYVFCKTLRHYIADMR 59

Query: 183 KSTFEGHILRVLRNEIQYETEYAPPKQPVKEFNSFTVEDRAGEQWIRLTSKHENKEKIKV 362
           +S FEG+ILR+LRNEI+YE + +PP QPV +F +FTV++R GEQWIRL  ++E +EKIK+
Sbjct: 60  RSAFEGNILRLLRNEIRYELDRSPPSQPVTKFGAFTVDERPGEQWIRLEREYEEREKIKI 119

Query: 363 EVTMFDGAKNVNED--ATENDEMQLHLSFIVDISKGEGSDIFQFVCSAWPDSIEIEKVFF 536
           E TMFD +    +   ++   ++ LH++ IV I+KG GSD+ + +CSAWPDSIEI+++F 
Sbjct: 120 EATMFDQSIPAPKSGGSSSGKDVLLHITTIVHITKGGGSDVLKIICSAWPDSIEIDRLFL 179

Query: 537 VKRNGMPTLPNVEPDCNEIQNMFFLKRNGMPKLPYVGPDFKXXXXXXXXXXXXXXXXRGV 716
             R G            EI          MP  PY GPDFK                RGV
Sbjct: 180 --RGG------------EI----------MPAQPYAGPDFKELDDDLQNSLYEYLEARGV 215

Query: 717 NDDLAVFLHDYMMNKDRIELIRWMGKVKSFLE 812
           +D LAVFLH+YM NKD+ E IRWM  +K+F+E
Sbjct: 216 DDQLAVFLHEYMKNKDKTEFIRWMETIKAFIE 247


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