BLASTX nr result

ID: Coptis24_contig00021810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021810
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279765.1| PREDICTED: uncharacterized protein LOC100255...   243   4e-93
ref|XP_002526403.1| conserved hypothetical protein [Ricinus comm...   235   1e-89
ref|XP_002325525.1| predicted protein [Populus trichocarpa] gi|2...   237   2e-89
gb|ABK93991.1| unknown [Populus trichocarpa]                          233   3e-89
ref|XP_002327376.1| predicted protein [Populus trichocarpa] gi|2...   233   3e-89

>ref|XP_002279765.1| PREDICTED: uncharacterized protein LOC100255018 [Vitis vinifera]
           gi|296090589|emb|CBI40958.3| unnamed protein product
           [Vitis vinifera]
          Length = 300

 Score =  243 bits (621), Expect(2) = 4e-93
 Identities = 108/143 (75%), Positives = 130/143 (90%)
 Frame = +1

Query: 1   IIHYSTSSITPQQTLSEISVTSQVLQKKSPCNFLVFGLGHDSLMWASLNHGGRTVFLEED 180
           ++HY+T +ITPQQT +EISV+ +VLQKK+PCNFLVFGLGHDSLMW +LNHGGRT+FLEED
Sbjct: 87  LVHYATLNITPQQTFNEISVSLRVLQKKAPCNFLVFGLGHDSLMWTALNHGGRTIFLEED 146

Query: 181 KSWIEQIRYGFPTLESYHVVYDSKVHQADELMKIGKGEECRVVTDPRSSKCQLALKTIPN 360
           KSWIEQI+   P+LESYHVVYDSKVHQADELM++G GE+C+VV DPR SKC+L+LK  PN
Sbjct: 147 KSWIEQIKQKLPSLESYHVVYDSKVHQADELMEVGMGEDCKVVVDPRFSKCKLSLKGFPN 206

Query: 361 EVYEIEWDLIMVDAPTGFHENAP 429
           EVY++EWDLIMVDAPTG+H+ AP
Sbjct: 207 EVYDVEWDLIMVDAPTGYHDEAP 229



 Score =  125 bits (313), Expect(2) = 4e-93
 Identities = 60/72 (83%), Positives = 65/72 (90%)
 Frame = +2

Query: 518 GRMSAIYTAGMIARNKEDGETDVFVHDVDRLVEDKFSKAFLCERYMRIQEGRLRHFTIPS 697
           GRMSAIYTAG++ARN+EDGETDVFVHDVDR+VEDKFSKAFLCE Y R QEGR+RHFTIPS
Sbjct: 230 GRMSAIYTAGLMARNREDGETDVFVHDVDRVVEDKFSKAFLCEGYFREQEGRIRHFTIPS 289

Query: 698 HRGTSGNRPFCP 733
           HR  SG R FCP
Sbjct: 290 HRTRSG-RSFCP 300


>ref|XP_002526403.1| conserved hypothetical protein [Ricinus communis]
           gi|223534265|gb|EEF35979.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 301

 Score =  235 bits (599), Expect(2) = 1e-89
 Identities = 107/143 (74%), Positives = 126/143 (88%)
 Frame = +1

Query: 1   IIHYSTSSITPQQTLSEISVTSQVLQKKSPCNFLVFGLGHDSLMWASLNHGGRTVFLEED 180
           ++HY T++ITPQQTL EISVT +VL+KKSPCNFLVFGLGHDSLMW SLNHGGRTVFLEED
Sbjct: 88  LVHYVTTNITPQQTLKEISVTLRVLEKKSPCNFLVFGLGHDSLMWTSLNHGGRTVFLEED 147

Query: 181 KSWIEQIRYGFPTLESYHVVYDSKVHQADELMKIGKGEECRVVTDPRSSKCQLALKTIPN 360
           KSWIEQI+   P+LESYHV Y++KVHQAD LM+ G GEEC+ V+DPR S CQLALK+ P+
Sbjct: 148 KSWIEQIKAKQPSLESYHVTYETKVHQADGLMETGMGEECKAVSDPRLSSCQLALKSFPS 207

Query: 361 EVYEIEWDLIMVDAPTGFHENAP 429
           +VY+ EWDLIMVDAPTG+H+ AP
Sbjct: 208 DVYDTEWDLIMVDAPTGYHDEAP 230



 Score =  122 bits (305), Expect(2) = 1e-89
 Identities = 58/72 (80%), Positives = 65/72 (90%)
 Frame = +2

Query: 518 GRMSAIYTAGMIARNKEDGETDVFVHDVDRLVEDKFSKAFLCERYMRIQEGRLRHFTIPS 697
           GRM+AIYTAG++ARN+E+GETDVFVHDVDR+VEDKFSKAFLCE Y+  QEGRLRHFTIPS
Sbjct: 231 GRMTAIYTAGLMARNRENGETDVFVHDVDRVVEDKFSKAFLCEGYLVEQEGRLRHFTIPS 290

Query: 698 HRGTSGNRPFCP 733
           HR   G RPFCP
Sbjct: 291 HRARLG-RPFCP 301


>ref|XP_002325525.1| predicted protein [Populus trichocarpa] gi|222862400|gb|EEE99906.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  237 bits (605), Expect(2) = 2e-89
 Identities = 107/143 (74%), Positives = 126/143 (88%)
 Frame = +1

Query: 1   IIHYSTSSITPQQTLSEISVTSQVLQKKSPCNFLVFGLGHDSLMWASLNHGGRTVFLEED 180
           ++HY T++ITPQQTL EISV+ +VL+KKSPCNFLVFGLGHDSLMW SLNHGGRTVFLEED
Sbjct: 21  LVHYVTTNITPQQTLKEISVSLRVLEKKSPCNFLVFGLGHDSLMWTSLNHGGRTVFLEED 80

Query: 181 KSWIEQIRYGFPTLESYHVVYDSKVHQADELMKIGKGEECRVVTDPRSSKCQLALKTIPN 360
           K+WIEQIR   PTLESYHV YD++VHQAD LM+ G G+EC+VV DPR SKCQLALK  P 
Sbjct: 81  KAWIEQIREKLPTLESYHVTYDTRVHQADGLMETGMGDECKVVGDPRFSKCQLALKGFPG 140

Query: 361 EVYEIEWDLIMVDAPTGFHENAP 429
           ++Y++EWDLIMVDAPTG+H+ AP
Sbjct: 141 DIYDVEWDLIMVDAPTGYHDEAP 163



 Score =  119 bits (297), Expect(2) = 2e-89
 Identities = 56/72 (77%), Positives = 64/72 (88%)
 Frame = +2

Query: 518 GRMSAIYTAGMIARNKEDGETDVFVHDVDRLVEDKFSKAFLCERYMRIQEGRLRHFTIPS 697
           GRM+AIYTAG++ARN+E+G TDVFVHDVDR+VEDKFSKAFLCE YM  QEGRLRHF IP+
Sbjct: 164 GRMNAIYTAGLMARNRENGVTDVFVHDVDRVVEDKFSKAFLCEGYMTEQEGRLRHFIIPT 223

Query: 698 HRGTSGNRPFCP 733
           HR TS  +PFCP
Sbjct: 224 HR-TSSGKPFCP 234


>gb|ABK93991.1| unknown [Populus trichocarpa]
          Length = 304

 Score =  233 bits (595), Expect(2) = 3e-89
 Identities = 104/143 (72%), Positives = 127/143 (88%)
 Frame = +1

Query: 1   IIHYSTSSITPQQTLSEISVTSQVLQKKSPCNFLVFGLGHDSLMWASLNHGGRTVFLEED 180
           ++HY T++ITPQQTL EISVT +VL+KKSPCNFLVFGLGHDSLMW SLNHGGRTVFLEED
Sbjct: 91  LVHYVTTNITPQQTLKEISVTLRVLEKKSPCNFLVFGLGHDSLMWTSLNHGGRTVFLEED 150

Query: 181 KSWIEQIRYGFPTLESYHVVYDSKVHQADELMKIGKGEECRVVTDPRSSKCQLALKTIPN 360
           K+WIEQI    P+LE+YHV YD++VHQAD LM+ G G+EC+VV+DPR SKCQL+LK  P+
Sbjct: 151 KAWIEQITEKLPSLEAYHVTYDTRVHQADGLMETGMGDECKVVSDPRFSKCQLSLKGFPS 210

Query: 361 EVYEIEWDLIMVDAPTGFHENAP 429
           ++Y++EWDLIMVDAPTG+H+ AP
Sbjct: 211 DIYDMEWDLIMVDAPTGYHDEAP 233



 Score =  122 bits (305), Expect(2) = 3e-89
 Identities = 58/72 (80%), Positives = 65/72 (90%)
 Frame = +2

Query: 518 GRMSAIYTAGMIARNKEDGETDVFVHDVDRLVEDKFSKAFLCERYMRIQEGRLRHFTIPS 697
           GRM+AIYTAG++ARN+E+GETDVFVHDVDR+VEDKFSKAFLCE Y+  QEGRLRHF IPS
Sbjct: 234 GRMTAIYTAGLMARNRENGETDVFVHDVDRVVEDKFSKAFLCEGYLTEQEGRLRHFIIPS 293

Query: 698 HRGTSGNRPFCP 733
           HR  SG RPFCP
Sbjct: 294 HRTRSG-RPFCP 304


>ref|XP_002327376.1| predicted protein [Populus trichocarpa] gi|222835746|gb|EEE74181.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score =  233 bits (595), Expect(2) = 3e-89
 Identities = 104/143 (72%), Positives = 127/143 (88%)
 Frame = +1

Query: 1   IIHYSTSSITPQQTLSEISVTSQVLQKKSPCNFLVFGLGHDSLMWASLNHGGRTVFLEED 180
           ++HY T++ITPQQTL EISVT +VL+KKSPCNFLVFGLGHDSLMW SLNHGGRTVFLEED
Sbjct: 13  LVHYVTTNITPQQTLKEISVTLRVLEKKSPCNFLVFGLGHDSLMWTSLNHGGRTVFLEED 72

Query: 181 KSWIEQIRYGFPTLESYHVVYDSKVHQADELMKIGKGEECRVVTDPRSSKCQLALKTIPN 360
           K+WIEQI    P+LE+YHV YD++VHQAD LM+ G G+EC+VV+DPR SKCQL+LK  P+
Sbjct: 73  KAWIEQITEKLPSLEAYHVTYDTRVHQADGLMETGMGDECKVVSDPRFSKCQLSLKGFPS 132

Query: 361 EVYEIEWDLIMVDAPTGFHENAP 429
           ++Y++EWDLIMVDAPTG+H+ AP
Sbjct: 133 DIYDMEWDLIMVDAPTGYHDEAP 155



 Score =  122 bits (305), Expect(2) = 3e-89
 Identities = 58/72 (80%), Positives = 65/72 (90%)
 Frame = +2

Query: 518 GRMSAIYTAGMIARNKEDGETDVFVHDVDRLVEDKFSKAFLCERYMRIQEGRLRHFTIPS 697
           GRM+AIYTAG++ARN+E+GETDVFVHDVDR+VEDKFSKAFLCE Y+  QEGRLRHF IPS
Sbjct: 156 GRMTAIYTAGLMARNRENGETDVFVHDVDRVVEDKFSKAFLCEGYLTEQEGRLRHFIIPS 215

Query: 698 HRGTSGNRPFCP 733
           HR  SG RPFCP
Sbjct: 216 HRTRSG-RPFCP 226


Top