BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021805
         (1553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containi...   518   e-145
emb|CBI19924.3| unnamed protein product [Vitis vinifera]              517   e-145
ref|XP_002530092.1| pentatricopeptide repeat-containing protein,...   466   e-132
ref|XP_002302207.1| predicted protein [Populus trichocarpa] gi|2...   467   e-129
ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containi...   451   e-126

>ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
            [Vitis vinifera]
          Length = 711

 Score =  518 bits (1333), Expect(2) = e-145
 Identities = 236/365 (64%), Positives = 295/365 (80%)
 Frame = +2

Query: 59   REARKLFNDMPERGVISWNAMLVGYTRLFQWEEALDFIFWMHRETNDVDSFSLSLILNVC 238
            REAR LF++MPER VISWNAML GYT   QWEEAL+F+F M + T D+D  ++ LILNVC
Sbjct: 345  REARVLFDEMPERSVISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVC 404

Query: 239  AGLSDILLGKQAHGFAYRHDLHSNTFVANAILDMYGKCGSLRSSRVWFSEMGHLRDRVSW 418
            AGLSD+  GKQ HGF YRH L+SN FV NA+L MYGKCG+LRS+R+WF +M H RDR+SW
Sbjct: 405  AGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISW 464

Query: 419  NAFISSYARHGLSEKAIPLFGKMILETTGTELDFSTLLAACANIFALDEGKQTHAYMLRN 598
            NA ++S+ARHGLSE+A+ +FG+M  ETT ++    TLL+ACANIFAL++GKQ H +M+RN
Sbjct: 465  NALLTSHARHGLSEEAMTIFGEMQWETTPSKFTLGTLLSACANIFALEQGKQIHGFMIRN 524

Query: 599  GFNIDVVTRGALVDMYSKCRCLEYAIKVFEESSSSDLILWNSMVLGCAHNGKGGEVLGLF 778
            G+ IDVV RGALVDMYSKCRCLEYA+KVF+E+ S DLILWNSM+LGC HNG+G +VLGLF
Sbjct: 525  GYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNSMILGCCHNGRGRDVLGLF 584

Query: 779  ESMQEEGIKCDNVTFQGVLLACIGEGFVDLGKQYFDSMSKDFCIIPRLEHYECMIELYSR 958
              M+EEG+K D++TFQG+LL CI EG   LG +YF+SMS  +CIIPRLEHYE MIELY R
Sbjct: 585  GLMEEEGVKPDHITFQGILLGCICEGLAGLGTEYFNSMSNKYCIIPRLEHYESMIELYGR 644

Query: 959  YGYMDELKGFVQNMPFHPTVPMLTRIFDACREYRHSELGEWAAQRLNEFKPLIPFQFEIF 1138
            +G+MDEL+ F++ MPF PTV MLTR+F+AC E+ HS LG+WAA++LNE  P  PF F+I 
Sbjct: 645  HGFMDELEDFIKRMPFEPTVAMLTRVFNACSEHGHSRLGKWAAEQLNELNPSTPFHFQIL 704

Query: 1139 PDNHI 1153
              + +
Sbjct: 705  DRSRV 709



 Score = 26.6 bits (57), Expect(2) = e-145
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +3

Query: 3   RDVITWTSIVSAYATCGR 56
           +++I+WTSIVS YA  G+
Sbjct: 326 KNLISWTSIVSGYAMSGQ 343



 Score =  153 bits (387), Expect = 1e-34
 Identities = 90/262 (34%), Positives = 139/262 (53%), Gaps = 1/262 (0%)
 Frame = +2

Query: 62  EARKLFNDMPERGVISWNAMLVGYTRLFQWEEALDFIFWMHRETNDVDSFSLSLILNVCA 241
           +AR+LF +MP+R   SWNAM+  Y +    E+AL     M+R     +  + + +L  CA
Sbjct: 113 DARELFEEMPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGSCA 172

Query: 242 GLSDILLGKQAHGFAYRHDLHSNTFVANAILDMYGKCGSLRSSRVWFSEMGHLRDRVSWN 421
            +  + L KQ HG   ++    N  + ++++D+YGKC  +  +R  F E+ +  + +SWN
Sbjct: 173 TVLALFLSKQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIEN-PNAISWN 231

Query: 422 AFISSYARHGLSEKAIPLFGKMI-LETTGTELDFSTLLAACANIFALDEGKQTHAYMLRN 598
             +  Y   G  ++A+ +F KMI          FS  L AC++I AL EG Q H   +R 
Sbjct: 232 VIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALIACSSISALQEGIQIHGVAIRI 291

Query: 599 GFNIDVVTRGALVDMYSKCRCLEYAIKVFEESSSSDLILWNSMVLGCAHNGKGGEVLGLF 778
           G++ D V   +L+DMY+KC  LE A ++FE  SS +LI W S+V G A +G+  E   LF
Sbjct: 292 GYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQTREARVLF 351

Query: 779 ESMQEEGIKCDNVTFQGVLLAC 844
           + M E  +   N    G    C
Sbjct: 352 DEMPERSVISWNAMLAGYTHFC 373



 Score =  116 bits (291), Expect = 1e-23
 Identities = 66/178 (37%), Positives = 100/178 (56%), Gaps = 1/178 (0%)
 Frame = +2

Query: 314 FVANAILDMYGKCGSLRSSRVWFSEMGHLRDRVSWNAFISSYARHGLSEKAIPLFGKM-I 490
           F+ N  ++ YGKC  L  +R  F EM   RD  SWNA I++YA+ G +EKA+ LF +M  
Sbjct: 96  FLLNRAIETYGKCSCLDDARELFEEMPQ-RDGGSWNAMITAYAQGGCAEKALWLFSRMNR 154

Query: 491 LETTGTELDFSTLLAACANIFALDEGKQTHAYMLRNGFNIDVVTRGALVDMYSKCRCLEY 670
           L     E+ F+++L +CA + AL   KQ H  +++ GF  +V+   +LVD+Y KCR +  
Sbjct: 155 LGIWANEITFASVLGSCATVLALFLSKQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSD 214

Query: 671 AIKVFEESSSSDLILWNSMVLGCAHNGKGGEVLGLFESMQEEGIKCDNVTFQGVLLAC 844
           A ++F+E  + + I WN +V      G   E + +F  M    I+  N TF   L+AC
Sbjct: 215 ARRMFDEIENPNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALIAC 272



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
 Frame = +2

Query: 518 FSTLLAACANIFALDEGKQTHAYMLRNGFNIDVVTRGALVDMYSKCRCLEYAIKVFEESS 697
           ++ L   C++  A+ E ++  ++++       +      ++ Y KC CL+ A ++FEE  
Sbjct: 63  YARLFQICSSNLAIVEARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEMP 122

Query: 698 SSDLILWNSMVLGCAHNGKGGEVLGLFESMQEEGIKCDNVTFQGVLLACIGEGFVDLGKQ 877
             D   WN+M+   A  G   + L LF  M   GI  + +TF  VL +C     + L KQ
Sbjct: 123 QRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGSCATVLALFLSKQ 182

Query: 878 YFDSMSK-DFC 907
               + K  FC
Sbjct: 183 IHGLIVKYGFC 193


>emb|CBI19924.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  517 bits (1332), Expect(2) = e-145
 Identities = 236/359 (65%), Positives = 293/359 (81%)
 Frame = +2

Query: 59   REARKLFNDMPERGVISWNAMLVGYTRLFQWEEALDFIFWMHRETNDVDSFSLSLILNVC 238
            REAR LF++MPER VISWNAML GYT   QWEEAL+F+F M + T D+D  ++ LILNVC
Sbjct: 345  REARVLFDEMPERSVISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVC 404

Query: 239  AGLSDILLGKQAHGFAYRHDLHSNTFVANAILDMYGKCGSLRSSRVWFSEMGHLRDRVSW 418
            AGLSD+  GKQ HGF YRH L+SN FV NA+L MYGKCG+LRS+R+WF +M H RDR+SW
Sbjct: 405  AGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISW 464

Query: 419  NAFISSYARHGLSEKAIPLFGKMILETTGTELDFSTLLAACANIFALDEGKQTHAYMLRN 598
            NA ++S+ARHGLSE+A+ +FG+M  ETT ++    TLL+ACANIFAL++GKQ H +M+RN
Sbjct: 465  NALLTSHARHGLSEEAMTIFGEMQWETTPSKFTLGTLLSACANIFALEQGKQIHGFMIRN 524

Query: 599  GFNIDVVTRGALVDMYSKCRCLEYAIKVFEESSSSDLILWNSMVLGCAHNGKGGEVLGLF 778
            G+ IDVV RGALVDMYSKCRCLEYA+KVF+E+ S DLILWNSM+LGC HNG+G +VLGLF
Sbjct: 525  GYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNSMILGCCHNGRGRDVLGLF 584

Query: 779  ESMQEEGIKCDNVTFQGVLLACIGEGFVDLGKQYFDSMSKDFCIIPRLEHYECMIELYSR 958
              M+EEG+K D++TFQG+LL CI EG   LG +YF+SMS  +CIIPRLEHYE MIELY R
Sbjct: 585  GLMEEEGVKPDHITFQGILLGCICEGLAGLGTEYFNSMSNKYCIIPRLEHYESMIELYGR 644

Query: 959  YGYMDELKGFVQNMPFHPTVPMLTRIFDACREYRHSELGEWAAQRLNEFKPLIPFQFEI 1135
            +G+MDEL+ F++ MPF PTV MLTR+F+AC E+ HS LG+WAA++LNE  P  PF F+I
Sbjct: 645  HGFMDELEDFIKRMPFEPTVAMLTRVFNACSEHGHSRLGKWAAEQLNELNPSTPFHFQI 703



 Score = 26.6 bits (57), Expect(2) = e-145
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +3

Query: 3   RDVITWTSIVSAYATCGR 56
           +++I+WTSIVS YA  G+
Sbjct: 326 KNLISWTSIVSGYAMSGQ 343



 Score =  153 bits (387), Expect = 1e-34
 Identities = 90/262 (34%), Positives = 139/262 (53%), Gaps = 1/262 (0%)
 Frame = +2

Query: 62  EARKLFNDMPERGVISWNAMLVGYTRLFQWEEALDFIFWMHRETNDVDSFSLSLILNVCA 241
           +AR+LF +MP+R   SWNAM+  Y +    E+AL     M+R     +  + + +L  CA
Sbjct: 113 DARELFEEMPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGSCA 172

Query: 242 GLSDILLGKQAHGFAYRHDLHSNTFVANAILDMYGKCGSLRSSRVWFSEMGHLRDRVSWN 421
            +  + L KQ HG   ++    N  + ++++D+YGKC  +  +R  F E+ +  + +SWN
Sbjct: 173 TVLALFLSKQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIEN-PNAISWN 231

Query: 422 AFISSYARHGLSEKAIPLFGKMI-LETTGTELDFSTLLAACANIFALDEGKQTHAYMLRN 598
             +  Y   G  ++A+ +F KMI          FS  L AC++I AL EG Q H   +R 
Sbjct: 232 VIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALIACSSISALQEGIQIHGVAIRI 291

Query: 599 GFNIDVVTRGALVDMYSKCRCLEYAIKVFEESSSSDLILWNSMVLGCAHNGKGGEVLGLF 778
           G++ D V   +L+DMY+KC  LE A ++FE  SS +LI W S+V G A +G+  E   LF
Sbjct: 292 GYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQTREARVLF 351

Query: 779 ESMQEEGIKCDNVTFQGVLLAC 844
           + M E  +   N    G    C
Sbjct: 352 DEMPERSVISWNAMLAGYTHFC 373



 Score =  116 bits (291), Expect = 1e-23
 Identities = 66/178 (37%), Positives = 100/178 (56%), Gaps = 1/178 (0%)
 Frame = +2

Query: 314 FVANAILDMYGKCGSLRSSRVWFSEMGHLRDRVSWNAFISSYARHGLSEKAIPLFGKM-I 490
           F+ N  ++ YGKC  L  +R  F EM   RD  SWNA I++YA+ G +EKA+ LF +M  
Sbjct: 96  FLLNRAIETYGKCSCLDDARELFEEMPQ-RDGGSWNAMITAYAQGGCAEKALWLFSRMNR 154

Query: 491 LETTGTELDFSTLLAACANIFALDEGKQTHAYMLRNGFNIDVVTRGALVDMYSKCRCLEY 670
           L     E+ F+++L +CA + AL   KQ H  +++ GF  +V+   +LVD+Y KCR +  
Sbjct: 155 LGIWANEITFASVLGSCATVLALFLSKQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSD 214

Query: 671 AIKVFEESSSSDLILWNSMVLGCAHNGKGGEVLGLFESMQEEGIKCDNVTFQGVLLAC 844
           A ++F+E  + + I WN +V      G   E + +F  M    I+  N TF   L+AC
Sbjct: 215 ARRMFDEIENPNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALIAC 272



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
 Frame = +2

Query: 518 FSTLLAACANIFALDEGKQTHAYMLRNGFNIDVVTRGALVDMYSKCRCLEYAIKVFEESS 697
           ++ L   C++  A+ E ++  ++++       +      ++ Y KC CL+ A ++FEE  
Sbjct: 63  YARLFQICSSNLAIVEARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEMP 122

Query: 698 SSDLILWNSMVLGCAHNGKGGEVLGLFESMQEEGIKCDNVTFQGVLLACIGEGFVDLGKQ 877
             D   WN+M+   A  G   + L LF  M   GI  + +TF  VL +C     + L KQ
Sbjct: 123 QRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGSCATVLALFLSKQ 182

Query: 878 YFDSMSK-DFC 907
               + K  FC
Sbjct: 183 IHGLIVKYGFC 193


>ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223530403|gb|EEF32291.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 718

 Score =  466 bits (1199), Expect(2) = e-132
 Identities = 218/359 (60%), Positives = 270/359 (75%)
 Frame = +2

Query: 59   REARKLFNDMPERGVISWNAMLVGYTRLFQWEEALDFIFWMHRETNDVDSFSLSLILNVC 238
            REAR+LF  MPE  V+SWNAML GY R  QWEEALDF+  M R T D+D  +L L+LNVC
Sbjct: 342  REARELFEKMPEWSVVSWNAMLAGYIRSLQWEEALDFVCLMRRTTEDIDHITLGLLLNVC 401

Query: 239  AGLSDILLGKQAHGFAYRHDLHSNTFVANAILDMYGKCGSLRSSRVWFSEMGHLRDRVSW 418
            AG+SD+ +GKQAHGF YRH   S   V NA+LDMYGKCG+LRS+RVWF +M   RD +SW
Sbjct: 402  AGISDVEMGKQAHGFIYRHGFSSCILVGNALLDMYGKCGNLRSARVWFYQMSQSRDNISW 461

Query: 419  NAFISSYARHGLSEKAIPLFGKMILETTGTELDFSTLLAACANIFALDEGKQTHAYMLRN 598
            NA ++SYARH  SE+A+ +FG+M  ET  +   F TLLAACANIFALD+GK+ H +M+RN
Sbjct: 462  NALLTSYARHHQSEQAMMIFGEMQWETKPSTFTFGTLLAACANIFALDQGKEIHGFMIRN 521

Query: 599  GFNIDVVTRGALVDMYSKCRCLEYAIKVFEESSSSDLILWNSMVLGCAHNGKGGEVLGLF 778
            G+N+D V  GALVDMYSKCRCL YA+ VF  + S D+ILWNS++LGC HNG+G EVL LF
Sbjct: 522  GYNLDTVISGALVDMYSKCRCLSYALTVFNRAGSRDVILWNSIILGCCHNGRGKEVLKLF 581

Query: 779  ESMQEEGIKCDNVTFQGVLLACIGEGFVDLGKQYFDSMSKDFCIIPRLEHYECMIELYSR 958
              M++EG+K D+VTF GVLLAC+ EG V L  +YF+SMS   C+IPRLEHYECMIEL+SR
Sbjct: 582  GQMEKEGVKPDHVTFHGVLLACMYEGHVKLAVEYFNSMSDKCCVIPRLEHYECMIELFSR 641

Query: 959  YGYMDELKGFVQNMPFHPTVPMLTRIFDACREYRHSELGEWAAQRLNEFKPLIPFQFEI 1135
            Y  M  L+ FV+ MPF PT  ML R+FDAC+E+  S   +W A++LN+  P I  QF+I
Sbjct: 642  YRCMSRLENFVKGMPFDPTASMLIRVFDACKEHGPSRFRKWVAEQLNKLNPSISSQFQI 700



 Score = 32.7 bits (73), Expect(2) = e-132
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 3   RDVITWTSIVSAYATCGR 56
           RDVI+WTS+VSAYA  GR
Sbjct: 323 RDVISWTSMVSAYALSGR 340



 Score =  152 bits (384), Expect = 2e-34
 Identities = 87/270 (32%), Positives = 144/270 (53%), Gaps = 1/270 (0%)
 Frame = +2

Query: 59  REARKLFNDMPERGVISWNAMLVGYTRLFQWEEALDFIFWMHRETNDVDSFSLSLILNVC 238
           ++AR+LF++MP+R   SWNA++  YT+    E+AL     M++E    +  + + +L  C
Sbjct: 109 KDARELFDEMPQRDGGSWNAIIKAYTQCGYAEKALGLFKDMNKEGVFANEITFASVLKSC 168

Query: 239 AGLSDILLGKQAHGFAYRHDLHSNTFVANAILDMYGKCGSLRSSRVWFSEMGHLRDRVSW 418
           + + D+ L +Q HG   +     N  + +A++D+YGKC  +  +R+ F+E+ +  D V+W
Sbjct: 169 SDVLDLSLSRQIHGLIVKCGFCGNVILGSALVDVYGKCKVMSEARLMFNEIENCND-VTW 227

Query: 419 NAFISSYARHGLSEKAIPLFGKMI-LETTGTELDFSTLLAACANIFALDEGKQTHAYMLR 595
           N  +  Y   G   +A+ +F KM   +       FS  L AC+ + AL+EG Q HA+ ++
Sbjct: 228 NVIVRRYLDVGNEREAVKMFFKMFQTDVRPLNFTFSNALIACSAMRALNEGMQIHAFAIK 287

Query: 596 NGFNIDVVTRGALVDMYSKCRCLEYAIKVFEESSSSDLILWNSMVLGCAHNGKGGEVLGL 775
             F  D     +L +MY+KC  LE A  +F++  S D+I W SMV   A +G+  E   L
Sbjct: 288 IKFEEDEAVSSSLSNMYAKCGKLESARMIFDQHGSRDVISWTSMVSAYALSGRTREAREL 347

Query: 776 FESMQEEGIKCDNVTFQGVLLACIGEGFVD 865
           FE M E  +   N    G + +   E  +D
Sbjct: 348 FEKMPEWSVVSWNAMLAGYIRSLQWEEALD 377



 Score =  108 bits (270), Expect = 4e-21
 Identities = 69/254 (27%), Positives = 127/254 (50%), Gaps = 2/254 (0%)
 Frame = +2

Query: 122 LVGYTRLFQWEEALDFIFWMHRETNDVDSFSL-SLILNVCAGLSDILLGKQAHGFAYRHD 298
           ++ + +  + ++A+  +F     +N    +SL + +  +C+    I+  ++        +
Sbjct: 32  IINHLKANRLQKAVSILF----ASNSSVPYSLYASLFQLCSSTLSIVEARKIESHLITFN 87

Query: 299 LHSNTFVANAILDMYGKCGSLRSSRVWFSEMGHLRDRVSWNAFISSYARHGLSEKAIPLF 478
                F+ N  ++ YGKC  L+ +R  F EM   RD  SWNA I +Y + G +EKA+ LF
Sbjct: 88  PTPPIFLLNRAIETYGKCECLKDARELFDEMPQ-RDGGSWNAIIKAYTQCGYAEKALGLF 146

Query: 479 GKMILETT-GTELDFSTLLAACANIFALDEGKQTHAYMLRNGFNIDVVTRGALVDMYSKC 655
             M  E     E+ F+++L +C+++  L   +Q H  +++ GF  +V+   ALVD+Y KC
Sbjct: 147 KDMNKEGVFANEITFASVLKSCSDVLDLSLSRQIHGLIVKCGFCGNVILGSALVDVYGKC 206

Query: 656 RCLEYAIKVFEESSSSDLILWNSMVLGCAHNGKGGEVLGLFESMQEEGIKCDNVTFQGVL 835
           + +  A  +F E  + + + WN +V      G   E + +F  M +  ++  N TF   L
Sbjct: 207 KVMSEARLMFNEIENCNDVTWNVIVRRYLDVGNEREAVKMFFKMFQTDVRPLNFTFSNAL 266

Query: 836 LACIGEGFVDLGKQ 877
           +AC     ++ G Q
Sbjct: 267 IACSAMRALNEGMQ 280


>ref|XP_002302207.1| predicted protein [Populus trichocarpa] gi|222843933|gb|EEE81480.1|
            predicted protein [Populus trichocarpa]
          Length = 709

 Score =  467 bits (1202), Expect = e-129
 Identities = 218/359 (60%), Positives = 277/359 (77%)
 Frame = +2

Query: 59   REARKLFNDMPERGVISWNAMLVGYTRLFQWEEALDFIFWMHRETNDVDSFSLSLILNVC 238
            REAR+LF++MPER ++S+NA+L GY R  QWEEALDF++ M R T ++D  +  L+LNVC
Sbjct: 342  REARELFDEMPERNMVSYNALLAGYIRSLQWEEALDFVYLMCRTTENIDHITFQLMLNVC 401

Query: 239  AGLSDILLGKQAHGFAYRHDLHSNTFVANAILDMYGKCGSLRSSRVWFSEMGHLRDRVSW 418
            +GLSD+ +GKQ HGF YRH   SNT + NA+LDMY KCG+LRS+ VWF +M   RD VSW
Sbjct: 402  SGLSDVDMGKQVHGFIYRHGWLSNTVIGNALLDMYCKCGNLRSAGVWFHQMKQSRDSVSW 461

Query: 419  NAFISSYARHGLSEKAIPLFGKMILETTGTELDFSTLLAACANIFALDEGKQTHAYMLRN 598
            N  ++SYAR  +SE+A+ +F +M  ET   +  F+TLLAACAN FALD+GKQ H +M+RN
Sbjct: 462  NVLLTSYARRQMSEQAMSIFREMQWETKPHKFIFATLLAACANTFALDQGKQIHGFMIRN 521

Query: 599  GFNIDVVTRGALVDMYSKCRCLEYAIKVFEESSSSDLILWNSMVLGCAHNGKGGEVLGLF 778
            G++ID V  GAL+DMYSKCRCLEYA+ VF E+   DL+LWNSM+LGC H G+G   L LF
Sbjct: 522  GYDIDTVIAGALLDMYSKCRCLEYALIVFREADKRDLVLWNSMILGCCHLGRGKLALRLF 581

Query: 779  ESMQEEGIKCDNVTFQGVLLACIGEGFVDLGKQYFDSMSKDFCIIPRLEHYECMIELYSR 958
              M+EEG K DNVTFQG+LLAC+ EG VDL +QYF+SMS  +CIIPRLEHYEC+IEL SR
Sbjct: 582  GFMEEEGTKPDNVTFQGILLACVYEGHVDLARQYFNSMSSKYCIIPRLEHYECIIELLSR 641

Query: 959  YGYMDELKGFVQNMPFHPTVPMLTRIFDACREYRHSELGEWAAQRLNEFKPLIPFQFEI 1135
            YG M EL+ F+++MPF PT PMLTR+ DAC+E++   LGEWAA+RL+E  P +P  FEI
Sbjct: 642  YGCMKELENFIKDMPFDPTAPMLTRVVDACKEHQCWRLGEWAAKRLDELSPSVPLPFEI 700



 Score =  150 bits (380), Expect = 7e-34
 Identities = 93/304 (30%), Positives = 149/304 (49%), Gaps = 32/304 (10%)
 Frame = +2

Query: 62   EARKLFNDMPERGVISWNAMLVGYTRLFQWEEALDFIFWMHRETNDVDSFSLSLILNVCA 241
            +A++LF++MP+R   SWNAM+    +  + E+AL +   MH++    +  + S  L  C 
Sbjct: 110  DAKELFDEMPQRDGGSWNAMIRACLQCVRPEKALSYFGDMHKQGVYANEVTFSSALRACG 169

Query: 242  GLSDILLGKQAHGFAYRHDLHSNTFVANAILDMYGKCGSLRSSRVWFSEMGHLRDRVSWN 421
             + ++ L +Q HG   ++    N  V ++++D+YGKCG++  SR  F E+ +  + V+WN
Sbjct: 170  DVLELCLSRQIHGLIVKYGFCGNVIVGSSLVDVYGKCGAMSESRRIFDEIEN-PNNVTWN 228

Query: 422  AFISSYARHGLSEKAIPLFGKMI-LETTGTELDFSTLLAACANIFALDEGKQTHAYMLRN 598
              +  Y   G   +A+ +F KM   +       FS  L AC+++ A+ EG Q H    + 
Sbjct: 229  IIVRRYLEVGDENEAVVMFFKMFRAKLRPLSYTFSNALVACSDMRAVKEGMQIHGVATKI 288

Query: 599  GFNIDVVTRGALVDMYSKCRCLEYAIKVFEESSSSDLILWNSMVLGCAHNGKGGEVLGLF 778
             F  + V   +L+DMY KC  +E A +VF+   S DLI W SMV   A +G+  E   LF
Sbjct: 289  NFEEEEVVLSSLIDMYVKCGEIESARRVFDLPGSRDLISWTSMVSAYAMSGRMREARELF 348

Query: 779  ESMQEEGI-------------------------------KCDNVTFQGVLLACIGEGFVD 865
            + M E  +                                 D++TFQ +L  C G   VD
Sbjct: 349  DEMPERNMVSYNALLAGYIRSLQWEEALDFVYLMCRTTENIDHITFQLMLNVCSGLSDVD 408

Query: 866  LGKQ 877
            +GKQ
Sbjct: 409  MGKQ 412



 Score = 97.8 bits (242), Expect = 7e-18
 Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 1/190 (0%)
 Frame = +2

Query: 311 TFVANAILDMYGKCGSLRSSRVWFSEMGHLRDRVSWNAFISSYARHGLSEKAIPLFGKMI 490
           TF+ N  +D YGKC  L  ++  F EM   RD  SWNA I +  +    EKA+  FG M 
Sbjct: 92  TFLLNRAIDTYGKCRCLEDAKELFDEMPQ-RDGGSWNAMIRACLQCVRPEKALSYFGDMH 150

Query: 491 LETT-GTELDFSTLLAACANIFALDEGKQTHAYMLRNGFNIDVVTRGALVDMYSKCRCLE 667
            +     E+ FS+ L AC ++  L   +Q H  +++ GF  +V+   +LVD+Y KC  + 
Sbjct: 151 KQGVYANEVTFSSALRACGDVLELCLSRQIHGLIVKYGFCGNVIVGSSLVDVYGKCGAMS 210

Query: 668 YAIKVFEESSSSDLILWNSMVLGCAHNGKGGEVLGLFESMQEEGIKCDNVTFQGVLLACI 847
            + ++F+E  + + + WN +V      G   E + +F  M    ++  + TF   L+AC 
Sbjct: 211 ESRRIFDEIENPNNVTWNIIVRRYLEVGDENEAVVMFFKMFRAKLRPLSYTFSNALVACS 270

Query: 848 GEGFVDLGKQ 877
               V  G Q
Sbjct: 271 DMRAVKEGMQ 280


>ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540-like
            [Cucumis sativus] gi|449521874|ref|XP_004167954.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At3g26540-like [Cucumis sativus]
          Length = 697

 Score =  451 bits (1159), Expect(2) = e-126
 Identities = 208/348 (59%), Positives = 268/348 (77%), Gaps = 1/348 (0%)
 Frame = +2

Query: 62   EARKLFNDMPERGVISWNAMLVGYTRLFQWEEALDFIFWMHRETNDVDSFSLSLILNVCA 241
            +AR+LFN+MPER VISWNAML GY    QWEEAL+F+  M     D+D  +L LILNVC 
Sbjct: 345  KARELFNEMPERNVISWNAMLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCT 404

Query: 242  GLSDILLGKQAHGFAYRHDLHSNTFVANAILDMYGKCGSLRSSRVWFSEMGHLRDRVSWN 421
            G SD+  GKQ HGF YR   ++N ++ NA+LDMYGKCG+L+S++VWF +M   RD+VSWN
Sbjct: 405  GSSDVERGKQVHGFVYRTGFYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWN 464

Query: 422  AFISSYARHGLSEKAIPLFGKMILETTGTELDFSTLLAACANIFALDEGKQTHAYMLRNG 601
            A ++++ARHG+SE+A+ +F +M LET      F+TLL ACAN+FAL+ GKQ H +M+RN 
Sbjct: 465  ALLTAHARHGMSEQAMTIFSEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNN 524

Query: 602  FNIDVVTRGALVDMYSKCRCLEYAIKVFEESSSSDLILWNSMVLGCAHNGKGGEVLGLFE 781
            + ID+V  GALVDMY KCR L+YA+KVFE  +S D++LWNS++LGC HN +    + LF+
Sbjct: 525  YAIDIVLTGALVDMYCKCRELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQ 584

Query: 782  SM-QEEGIKCDNVTFQGVLLACIGEGFVDLGKQYFDSMSKDFCIIPRLEHYECMIELYSR 958
             M  EEGIK D+VTFQG+LLAC+ E  V+LG++YFDSMS+ FC+IPRLEHYECM+ELY +
Sbjct: 585  LMTMEEGIKPDHVTFQGILLACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQ 644

Query: 959  YGYMDELKGFVQNMPFHPTVPMLTRIFDACREYRHSELGEWAAQRLNE 1102
            +G MDEL+ F+ NMPF PTVPML RIF+ACRE+ HS L EW A RLNE
Sbjct: 645  HGNMDELEKFINNMPFDPTVPMLERIFNACREHGHSRLAEWVAIRLNE 692



 Score = 28.1 bits (61), Expect(2) = e-126
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +3

Query: 3   RDVITWTSIVSAYATCGRI 59
           R++I+WTS+V AYAT G +
Sbjct: 325 RNLISWTSMVYAYATSGDV 343



 Score =  139 bits (351), Expect = 2e-30
 Identities = 83/260 (31%), Positives = 135/260 (51%), Gaps = 1/260 (0%)
 Frame = +2

Query: 59  REARKLFNDMPERGVISWNAMLVGYTRLFQWEEALDFIFWMHRETNDVDSFSLSLILNVC 238
           ++AR+LF++MP+R   SWNAM+  YT+     EAL+    +++        +L+ IL  C
Sbjct: 111 KDARELFDEMPQRDGGSWNAMITAYTQNGYALEALNLYLDLNKSGVYATEVTLASILRSC 170

Query: 239 AGLSDILLGKQAHGFAYRHDLHSNTFVANAILDMYGKCGSLRSSRVWFSEMGHLRDRVSW 418
             +  +   +Q HG   +     N  + ++++D+YGKC  +  +R  F E+ + R+ VSW
Sbjct: 171 GSVLALHFSRQIHGHIVKCGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQN-RNDVSW 229

Query: 419 NAFISSYARHGLSEKAIPLFGKMILET-TGTELDFSTLLAACANIFALDEGKQTHAYMLR 595
           N  +  Y   G  ++A+ +F +M  E+   +   FS  L AC+ + AL EG Q H  +++
Sbjct: 230 NVIVRRYLEVGNGKEAVSMFFQMFRESLMPSSFTFSNALIACSRMAALIEGGQIHGIVVK 289

Query: 596 NGFNIDVVTRGALVDMYSKCRCLEYAIKVFEESSSSDLILWNSMVLGCAHNGKGGEVLGL 775
            G   + V   +L+DMY KC  L  A +VF + SS +LI W SMV   A +G   +   L
Sbjct: 290 VGLEENEVISSSLIDMYVKCGTLANAHQVFTQPSSRNLISWTSMVYAYATSGDVLKAREL 349

Query: 776 FESMQEEGIKCDNVTFQGVL 835
           F  M E  +   N    G +
Sbjct: 350 FNEMPERNVISWNAMLAGYI 369



 Score =  131 bits (329), Expect = 6e-28
 Identities = 87/326 (26%), Positives = 158/326 (48%), Gaps = 33/326 (10%)
 Frame = +2

Query: 23   INCFSVCNLWTNREARKLFNDMPERGVISWNAMLVGYTRLFQWEEALDFIFWMHRETNDV 202
            ++ +  C L    +AR +F+++  R  +SWN ++  Y  +   +EA+   F M RE+   
Sbjct: 202  VDVYGKCRLMN--DARSMFDEIQNRNDVSWNVIVRRYLEVGNGKEAVSMFFQMFRESLMP 259

Query: 203  DSFSLSLILNVCAGLSDILLGKQAHGFAYRHDLHSNTFVANAILDMYGKCGSLRSSRVWF 382
             SF+ S  L  C+ ++ ++ G Q HG   +  L  N  ++++++DMY KCG+L ++   F
Sbjct: 260  SSFTFSNALIACSRMAALIEGGQIHGIVVKVGLEENEVISSSLIDMYVKCGTLANAHQVF 319

Query: 383  SEMGHLRDRVSWNAFISSYARHGLSEKAIPLFGKM------------------------- 487
            ++    R+ +SW + + +YA  G   KA  LF +M                         
Sbjct: 320  TQPSS-RNLISWTSMVYAYATSGDVLKARELFNEMPERNVISWNAMLAGYIHSSQWEEAL 378

Query: 488  ----ILETTGTELDFSTL---LAACANIFALDEGKQTHAYMLRNGFNIDVVTRGALVDMY 646
                ++ ++  ++D +TL   L  C     ++ GKQ H ++ R GF  ++    AL+DMY
Sbjct: 379  EFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTGFYANLYIGNALLDMY 438

Query: 647  SKCRCLEYA-IKVFEESSSSDLILWNSMVLGCAHNGKGGEVLGLFESMQEEGIKCDNVTF 823
             KC  L+ A +  ++ S   D + WN+++   A +G   + + +F  MQ E    +N TF
Sbjct: 439  GKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIFSEMQLE-TDPNNFTF 497

Query: 824  QGVLLACIGEGFVDLGKQYFDSMSKD 901
              +L AC     ++ GKQ    M ++
Sbjct: 498  ATLLGACANMFALEHGKQIHGFMVRN 523



 Score =  112 bits (279), Expect = 3e-22
 Identities = 60/180 (33%), Positives = 103/180 (57%), Gaps = 3/180 (1%)
 Frame = +2

Query: 314 FVANAILDMYGKCGSLRSSRVWFSEMGHLRDRVSWNAFISSYARHGLSEKAIPLFGKMIL 493
           F+ N  ++ YGKCG L+ +R  F EM   RD  SWNA I++Y ++G + +A+ L+  + L
Sbjct: 95  FLLNRAIEAYGKCGCLKDARELFDEMPQ-RDGGSWNAMITAYTQNGYALEALNLY--LDL 151

Query: 494 ETTG---TELDFSTLLAACANIFALDEGKQTHAYMLRNGFNIDVVTRGALVDMYSKCRCL 664
             +G   TE+  +++L +C ++ AL   +Q H ++++ GF  +V+   +LVD+Y KCR +
Sbjct: 152 NKSGVYATEVTLASILRSCGSVLALHFSRQIHGHIVKCGFVGNVILESSLVDVYGKCRLM 211

Query: 665 EYAIKVFEESSSSDLILWNSMVLGCAHNGKGGEVLGLFESMQEEGIKCDNVTFQGVLLAC 844
             A  +F+E  + + + WN +V      G G E + +F  M  E +   + TF   L+AC
Sbjct: 212 NDARSMFDEIQNRNDVSWNVIVRRYLEVGNGKEAVSMFFQMFRESLMPSSFTFSNALIAC 271