BLASTX nr result

ID: Coptis24_contig00021795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021795
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632647.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    79   4e-13
ref|XP_002282155.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    79   4e-13
ref|XP_002315859.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
gb|ABK96576.1| unknown [Populus trichocarpa x Populus deltoides]       76   2e-12
emb|CBI30321.3| unnamed protein product [Vitis vinifera]               75   5e-12

>ref|XP_003632647.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like
           isoform 2 [Vitis vinifera]
          Length = 363

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/49 (71%), Positives = 43/49 (87%)
 Frame = +1

Query: 103 DYDRMKEVKEFDDSKIGVKGLVDSGITTIPRFFVHKPENLADIKTCSES 249
           DYDRMKEVKEFD+SK+GVKGL DSGIT+IPRFF+H P+ L+ +K+ S S
Sbjct: 7   DYDRMKEVKEFDESKMGVKGLSDSGITSIPRFFIHPPQTLSQLKSSSSS 55


>ref|XP_002282155.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like
           isoform 1 [Vitis vinifera]
          Length = 364

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/49 (71%), Positives = 43/49 (87%)
 Frame = +1

Query: 103 DYDRMKEVKEFDDSKIGVKGLVDSGITTIPRFFVHKPENLADIKTCSES 249
           DYDRMKEVKEFD+SK+GVKGL DSGIT+IPRFF+H P+ L+ +K+ S S
Sbjct: 7   DYDRMKEVKEFDESKMGVKGLSDSGITSIPRFFIHPPQTLSQLKSSSSS 55


>ref|XP_002315859.1| predicted protein [Populus trichocarpa] gi|222864899|gb|EEF02030.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/45 (73%), Positives = 41/45 (91%)
 Frame = +1

Query: 103 DYDRMKEVKEFDDSKIGVKGLVDSGITTIPRFFVHKPENLADIKT 237
           +YDR KEVK+FDDSKIGVKGL+DSGIT+IPR F+H PE L+D+K+
Sbjct: 12  EYDRSKEVKQFDDSKIGVKGLIDSGITSIPRIFIHPPETLSDLKS 56


>gb|ABK96576.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 408

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 33/44 (75%), Positives = 40/44 (90%)
 Frame = +1

Query: 106 YDRMKEVKEFDDSKIGVKGLVDSGITTIPRFFVHKPENLADIKT 237
           YDR KEVK+FDDSKIGVKGL+DSGIT+IPR F+H PE L+D+K+
Sbjct: 50  YDRSKEVKQFDDSKIGVKGLIDSGITSIPRIFIHPPETLSDLKS 93


>emb|CBI30321.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/56 (62%), Positives = 42/56 (75%)
 Frame = +1

Query: 82  LDSYPKMDYDRMKEVKEFDDSKIGVKGLVDSGITTIPRFFVHKPENLADIKTCSES 249
           L +    DYDRMKEVKEF +SKIGVKGL DSGIT+IPR F+H P+ L+ +K  S S
Sbjct: 58  LKTMASADYDRMKEVKEFSESKIGVKGLSDSGITSIPRIFIHPPQTLSQLKPTSSS 113


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