BLASTX nr result

ID: Coptis24_contig00021790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021790
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73373.1| hypothetical protein VITISV_006322 [Vitis vinifera]   248   7e-64
emb|CBI32840.3| unnamed protein product [Vitis vinifera]              248   1e-63
ref|XP_002278394.1| PREDICTED: uncharacterized protein LOC100246...   248   1e-63
ref|XP_002525693.1| conserved hypothetical protein [Ricinus comm...   214   2e-53
ref|XP_004149117.1| PREDICTED: uncharacterized protein LOC101221...   210   2e-52

>emb|CAN73373.1| hypothetical protein VITISV_006322 [Vitis vinifera]
          Length = 317

 Score =  248 bits (634), Expect = 7e-64
 Identities = 133/253 (52%), Positives = 172/253 (67%), Gaps = 5/253 (1%)
 Frame = +2

Query: 2   NSILVNFGLSEDMYNPVSXXXXXXXXXXXXXXXYWIVRKYIISEDGSVDDGIAYFVKWAV 181
           N+ILVNFGLSE+M+NPVS               YWIVRK++ISEDGSVD G+A FVKW +
Sbjct: 56  NTILVNFGLSEEMHNPVSIFALVGLILAGAALGYWIVRKFVISEDGSVDVGVAQFVKWGM 115

Query: 182 RIVGLTSILLSTLDTPLAILALASCWGICSFINSMFRGSALVYWSNEMSRIRSPW-LRAK 358
           R++  T IL STLDTPLA+ AL SCW I   I S  +    VY   + S  RSPW  +++
Sbjct: 116 RLIATTFILQSTLDTPLALGALVSCWXIWILITSP-KWRRRVY--KKYSENRSPWGWKSR 172

Query: 359 QVSAVRKNAEFLSRSAGKYSGMTPRSSPKSTIPW----IKGYISSPPIKGVTLTPDRDYY 526
           + +A    AEFLSRS       TP  SPKS+  W    ++G IS    +G+     +DYY
Sbjct: 173 EATAKHNRAEFLSRSGKTIPRGTPWDSPKSSSAWSDSPVRGVISRHKTRGIR--NQQDYY 230

Query: 527 SSFHNTPKRKRFSKKEWEDFTRESTRESLSELASSPEFTDWIVENADRIQLQPEDSSDDS 706
           S+FH TP RK+FSKK+WEDFTRESTR+++ ++ SSPEFTDWIVE+ADRIQ+ P+DSSD++
Sbjct: 231 STFHKTPSRKKFSKKDWEDFTRESTRQAMGDMVSSPEFTDWIVEHADRIQVLPDDSSDET 290

Query: 707 MDSGAVSSEETVV 745
           + SG+ S+EET V
Sbjct: 291 IGSGSDSTEETAV 303


>emb|CBI32840.3| unnamed protein product [Vitis vinifera]
          Length = 502

 Score =  248 bits (632), Expect = 1e-63
 Identities = 133/253 (52%), Positives = 172/253 (67%), Gaps = 5/253 (1%)
 Frame = +2

Query: 2   NSILVNFGLSEDMYNPVSXXXXXXXXXXXXXXXYWIVRKYIISEDGSVDDGIAYFVKWAV 181
           N+ILVNFGLSE+M+NPVS               YWIVRK++ISEDGSVD G+A FVKW +
Sbjct: 241 NTILVNFGLSEEMHNPVSIFALVGLILAGAALGYWIVRKFVISEDGSVDVGVAQFVKWGM 300

Query: 182 RIVGLTSILLSTLDTPLAILALASCWGICSFINSMFRGSALVYWSNEMSRIRSPW-LRAK 358
           R++  T IL STLDTPLA+ AL SCW I   I S  +    VY   + S  RSPW  +++
Sbjct: 301 RLIATTFILQSTLDTPLALGALVSCWVIWILITSP-KWRRRVY--KKYSENRSPWGWKSR 357

Query: 359 QVSAVRKNAEFLSRSAGKYSGMTPRSSPKSTIPW----IKGYISSPPIKGVTLTPDRDYY 526
           + +A    AEFLSRS       TP  SPKS+  W    ++G IS    +G+     +DYY
Sbjct: 358 EATAKHNRAEFLSRSGKTIPRGTPWDSPKSSSAWSDSPVRGVISRHKTRGIR--NQQDYY 415

Query: 527 SSFHNTPKRKRFSKKEWEDFTRESTRESLSELASSPEFTDWIVENADRIQLQPEDSSDDS 706
           S+FH TP RK+FSKK+WEDFTRESTR+++ ++ SSPEFTDWIVE+ADRIQ+ P+DSSD++
Sbjct: 416 STFHKTPSRKKFSKKDWEDFTRESTRQAMGDMVSSPEFTDWIVEHADRIQVLPDDSSDET 475

Query: 707 MDSGAVSSEETVV 745
           + SG+ S+EET V
Sbjct: 476 IGSGSDSTEETAV 488


>ref|XP_002278394.1| PREDICTED: uncharacterized protein LOC100246460 [Vitis vinifera]
          Length = 537

 Score =  248 bits (632), Expect = 1e-63
 Identities = 133/253 (52%), Positives = 172/253 (67%), Gaps = 5/253 (1%)
 Frame = +2

Query: 2    NSILVNFGLSEDMYNPVSXXXXXXXXXXXXXXXYWIVRKYIISEDGSVDDGIAYFVKWAV 181
            N+ILVNFGLSE+M+NPVS               YWIVRK++ISEDGSVD G+A FVKW +
Sbjct: 276  NTILVNFGLSEEMHNPVSIFALVGLILAGAALGYWIVRKFVISEDGSVDVGVAQFVKWGM 335

Query: 182  RIVGLTSILLSTLDTPLAILALASCWGICSFINSMFRGSALVYWSNEMSRIRSPW-LRAK 358
            R++  T IL STLDTPLA+ AL SCW I   I S  +    VY   + S  RSPW  +++
Sbjct: 336  RLIATTFILQSTLDTPLALGALVSCWVIWILITSP-KWRRRVY--KKYSENRSPWGWKSR 392

Query: 359  QVSAVRKNAEFLSRSAGKYSGMTPRSSPKSTIPW----IKGYISSPPIKGVTLTPDRDYY 526
            + +A    AEFLSRS       TP  SPKS+  W    ++G IS    +G+     +DYY
Sbjct: 393  EATAKHNRAEFLSRSGKTIPRGTPWDSPKSSSAWSDSPVRGVISRHKTRGIR--NQQDYY 450

Query: 527  SSFHNTPKRKRFSKKEWEDFTRESTRESLSELASSPEFTDWIVENADRIQLQPEDSSDDS 706
            S+FH TP RK+FSKK+WEDFTRESTR+++ ++ SSPEFTDWIVE+ADRIQ+ P+DSSD++
Sbjct: 451  STFHKTPSRKKFSKKDWEDFTRESTRQAMGDMVSSPEFTDWIVEHADRIQVLPDDSSDET 510

Query: 707  MDSGAVSSEETVV 745
            + SG+ S+EET V
Sbjct: 511  IGSGSDSTEETAV 523


>ref|XP_002525693.1| conserved hypothetical protein [Ricinus communis]
           gi|223534993|gb|EEF36676.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 502

 Score =  214 bits (544), Expect = 2e-53
 Identities = 122/249 (48%), Positives = 162/249 (65%), Gaps = 2/249 (0%)
 Frame = +2

Query: 2   NSILVNFGLSEDMYNPVSXXXXXXXXXXXXXXXYWIVRKYIISEDGSVDDGIAYFVKWAV 181
           NSIL+NFGLSE+M+NPV                YWIVRK++IS+DGSVD GIA FVKWA+
Sbjct: 252 NSILINFGLSEEMHNPVYVFVVVGIVLAGAALGYWIVRKFVISKDGSVDVGIAQFVKWAM 311

Query: 182 RIVGLTSILLSTLDTPLAILALASCWGICSFINSMFRGSALVYWSNEMSRIRSPWLR-AK 358
           RIV  T I  STLD  LA++   S + +C  IN + R +  VY S+  SR  SPWL+  +
Sbjct: 312 RIVAATLIFQSTLDILLALITFQSLYVVCFLINGLTRRNQ-VYQSH--SRGGSPWLQQGR 368

Query: 359 QVSAVRKNAEFLSRSAGKYSGMTPRSSPKSTIPWIKGYISSPPIKGVTLTPDRDYYSSFH 538
           QV+A     EFLSRS    SG     SPKS   W     S+ P+KG      +D+ S+FH
Sbjct: 369 QVTAKHNRTEFLSRSGKMSSGGKMWGSPKSASGW-----SNSPVKGTK--DQQDFISTFH 421

Query: 539 NTPKRKRFSKKEWEDFTRESTRESLSELASSPEFTDWIVENADRIQLQPED-SSDDSMDS 715
            TPK+K+F++ EWEDFTR+ST++++ E A+SPE   W+VENADRIQL P D SS+D++ S
Sbjct: 422 KTPKQKKFTETEWEDFTRDSTQQAVGEWAASPEVAAWLVENADRIQLIPSDCSSEDTVGS 481

Query: 716 GAVSSEETV 742
            + S++ET+
Sbjct: 482 ESDSTDETI 490


>ref|XP_004149117.1| PREDICTED: uncharacterized protein LOC101221567 [Cucumis sativus]
          Length = 497

 Score =  210 bits (535), Expect = 2e-52
 Identities = 115/250 (46%), Positives = 158/250 (63%), Gaps = 3/250 (1%)
 Frame = +2

Query: 2   NSILVNFGLSEDMYNPVSXXXXXXXXXXXXXXXYWIVRKYIISEDGSVDDGIAYFVKWAV 181
           NSIL++FGL E+M+NPV+               +WIVRK++IS+DG+VD G+A FVKWA+
Sbjct: 242 NSILLSFGLKEEMHNPVAIFLLLGIILSGAALGFWIVRKFVISDDGNVDIGVAQFVKWAM 301

Query: 182 RIVGLTSILLSTLDTPLAILALASCWGICSFINSMFRGSALVYWSNEMSRIRSPWLRA-K 358
           RI+G T I  ST D PLA+ A   CW  C  I+S+    ++   +   +R  SPW +  K
Sbjct: 302 RIIGATFIFQSTPDAPLALGAFVCCWAACYLISSLKHRGSIFVRNQSYTRSGSPWKQQNK 361

Query: 359 QVSAVRKNAEFLSRSA--GKYSGMTPRSSPKSTIPWIKGYISSPPIKGVTLTPDRDYYSS 532
           ++   R + EFLSRS+   +   ++ R SP      + G IS  P  G+    DRDYYS+
Sbjct: 362 KIVGKRIHPEFLSRSSPQDRRWRVSDRHSPAWPNSPVNGAIS--PSSGM---QDRDYYST 416

Query: 533 FHNTPKRKRFSKKEWEDFTRESTRESLSELASSPEFTDWIVENADRIQLQPEDSSDDSMD 712
           FH T  RK+F+KK W+DFTR STR++L+E ASSPEFTDWI+E ADRIQL   D SD+++ 
Sbjct: 417 FHKTSNRKKFTKKTWDDFTRNSTRQALTEWASSPEFTDWIMEQADRIQLLQSDGSDEAVG 476

Query: 713 SGAVSSEETV 742
           S + S+ E V
Sbjct: 477 SESDSTSENV 486