BLASTX nr result

ID: Coptis24_contig00021786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021786
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521442.1| tRNA, putative [Ricinus communis] gi|2235393...   256   2e-66
ref|XP_002273877.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   254   8e-66
ref|XP_004135565.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltra...   249   2e-64
emb|CAN61088.1| hypothetical protein VITISV_033584 [Vitis vinifera]   247   1e-63
ref|XP_002324584.1| predicted protein [Populus trichocarpa] gi|2...   241   9e-62

>ref|XP_002521442.1| tRNA, putative [Ricinus communis] gi|223539341|gb|EEF40932.1| tRNA,
           putative [Ricinus communis]
          Length = 311

 Score =  256 bits (654), Expect = 2e-66
 Identities = 129/168 (76%), Positives = 142/168 (84%)
 Frame = +2

Query: 2   QRAASAREDFEKIGLSSLVTVGVRDIQGEGFPEEFCGAADSVFLDLPQPWLAIPSAGKML 181
           QRAASAREDFEK G+SSLVTVGVRDIQGEGFP+E+ G  DSVFLDLPQPWLAIPSA KML
Sbjct: 144 QRAASAREDFEKTGVSSLVTVGVRDIQGEGFPDEYSGLVDSVFLDLPQPWLAIPSAAKML 203

Query: 182 KPDGVLCSFSPCIEQVQRSCETLKTNFTDIRTFEVLLRSYEVREGKTDFTVSDSGGPIGS 361
           K DGVLCSFSPCIEQVQRSCETL++NFTDIRTFEVLLR+YEVRE K D    + G  +GS
Sbjct: 204 KQDGVLCSFSPCIEQVQRSCETLRSNFTDIRTFEVLLRTYEVREVKMDCGQGEEGISLGS 263

Query: 362 LPCKRRHVSEEVSNGRNNKCSSPAVMARPCAEARGHTGYLTFARLKCL 505
            P KRR  S E SN +N+  SSP +MARPC ++RGHTGYLTFARLKCL
Sbjct: 264 PPYKRRQRSSEGSNVQNSS-SSPVIMARPCGDSRGHTGYLTFARLKCL 310


>ref|XP_002273877.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase catalytic subunit
           TRMT61A [Vitis vinifera]
          Length = 324

 Score =  254 bits (649), Expect = 8e-66
 Identities = 136/179 (75%), Positives = 145/179 (81%), Gaps = 2/179 (1%)
 Frame = +2

Query: 2   QRAASAREDFEKIGLSSLVTVGVRDIQGEGFPEEFCGAADSVFLDLPQPWLAIPSAGKML 181
           QRAASAREDFEKIGLSS VTVGVRDIQGEGFP+EF G ADSVFLDLPQPWLAIPSAGKML
Sbjct: 144 QRAASAREDFEKIGLSSFVTVGVRDIQGEGFPDEFSGLADSVFLDLPQPWLAIPSAGKML 203

Query: 182 KPDGVLCSFSPCIEQVQRSCETLKTNFTDIRTFEVLLRSYEVREGKTDFTVSDSGGPIGS 361
           K DGVLCSFSPCIEQVQRS ETL +NFTDIRTFEVLLR+YEVREGK D +  + GG +G 
Sbjct: 204 KEDGVLCSFSPCIEQVQRSSETLTSNFTDIRTFEVLLRTYEVREGKMDCSQGNEGGFLGP 263

Query: 362 LPCKRRHVSEEVSNGRNNKCSSPAVMARPCAEARGHTGYLTFARLKC--LR*LKSNIPP 532
            P KRR  S E SN      +S  VMARP AEARGHTG+LTFARLKC  LR   S +PP
Sbjct: 264 RPGKRRQRSGEASN-EGEIPTSTTVMARPAAEARGHTGFLTFARLKCLSLRGGTSPLPP 321


>ref|XP_004135565.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase catalytic
           subunit TRMT61A-like [Cucumis sativus]
           gi|449528672|ref|XP_004171327.1| PREDICTED: tRNA
           (adenine(58)-N(1))-methyltransferase catalytic subunit
           TRMT61A-like [Cucumis sativus]
          Length = 310

 Score =  249 bits (637), Expect = 2e-64
 Identities = 125/168 (74%), Positives = 141/168 (83%)
 Frame = +2

Query: 2   QRAASAREDFEKIGLSSLVTVGVRDIQGEGFPEEFCGAADSVFLDLPQPWLAIPSAGKML 181
           QRA+SAREDFEK GL+SLVTVGVRDIQG+GFPEEF G ADSVFLDLPQPWLAIPSA +ML
Sbjct: 144 QRASSAREDFEKTGLTSLVTVGVRDIQGQGFPEEFVGLADSVFLDLPQPWLAIPSAERML 203

Query: 182 KPDGVLCSFSPCIEQVQRSCETLKTNFTDIRTFEVLLRSYEVREGKTDFTVSDSGGPIGS 361
           K DG+LCSFSPCIEQVQRS ETL++ FTDIRTFEVLLR+YEV+EG+T+    D GG +G 
Sbjct: 204 KQDGMLCSFSPCIEQVQRSVETLRSKFTDIRTFEVLLRTYEVKEGRTESNQVDGGGSVGL 263

Query: 362 LPCKRRHVSEEVSNGRNNKCSSPAVMARPCAEARGHTGYLTFARLKCL 505
            PCKRR  S+E  +  N   SS  VM RPC+EARGHTGYLTFARL+CL
Sbjct: 264 PPCKRRLRSKESDDMDNE--SSTTVMVRPCSEARGHTGYLTFARLRCL 309


>emb|CAN61088.1| hypothetical protein VITISV_033584 [Vitis vinifera]
          Length = 777

 Score =  247 bits (630), Expect = 1e-63
 Identities = 129/165 (78%), Positives = 137/165 (83%)
 Frame = +2

Query: 2   QRAASAREDFEKIGLSSLVTVGVRDIQGEGFPEEFCGAADSVFLDLPQPWLAIPSAGKML 181
           QRAASAREDFEKIGLSS VTVGVRDIQGEGFP+EF G ADSVFLDLPQPWLAIPSAGKML
Sbjct: 211 QRAASAREDFEKIGLSSFVTVGVRDIQGEGFPDEFSGLADSVFLDLPQPWLAIPSAGKML 270

Query: 182 KPDGVLCSFSPCIEQVQRSCETLKTNFTDIRTFEVLLRSYEVREGKTDFTVSDSGGPIGS 361
           K DGVLCSFSPCIEQVQRS ETL +NFTDIRTFEVLLR+YEVREGK D +  + GG +G 
Sbjct: 271 KEDGVLCSFSPCIEQVQRSSETLTSNFTDIRTFEVLLRTYEVREGKMDCSQGNEGGFLGP 330

Query: 362 LPCKRRHVSEEVSNGRNNKCSSPAVMARPCAEARGHTGYLTFARL 496
            P KRR  S E SN      +S  VMARP AEARGHTG+LTFARL
Sbjct: 331 RPGKRRQRSGEASN-EGEIPTSTTVMARPAAEARGHTGFLTFARL 374


>ref|XP_002324584.1| predicted protein [Populus trichocarpa] gi|222866018|gb|EEF03149.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  241 bits (614), Expect = 9e-62
 Identities = 121/168 (72%), Positives = 136/168 (80%)
 Frame = +2

Query: 2   QRAASAREDFEKIGLSSLVTVGVRDIQGEGFPEEFCGAADSVFLDLPQPWLAIPSAGKML 181
           QRAASAREDF+  G+ SLVTVG RDIQGEGFP+E+ G ADSVFLDLPQPWLAI SAGKML
Sbjct: 144 QRAASAREDFQSTGVGSLVTVGARDIQGEGFPDEYSGLADSVFLDLPQPWLAILSAGKML 203

Query: 182 KPDGVLCSFSPCIEQVQRSCETLKTNFTDIRTFEVLLRSYEVREGKTDFTVSDSGGPIGS 361
           K DG LCSFSPCIEQVQR+CE LK+NF DIRTFEVLLR++EV EGK D    D G  +GS
Sbjct: 204 KQDGTLCSFSPCIEQVQRTCEALKSNFRDIRTFEVLLRTFEVHEGKMDSCQGDEGVSVGS 263

Query: 362 LPCKRRHVSEEVSNGRNNKCSSPAVMARPCAEARGHTGYLTFARLKCL 505
            P KRR  S E S  +++  SSP + ARPCA+ARGHTGYLTF+RLKCL
Sbjct: 264 PPYKRRQRSSEGSIVQDSS-SSPTIKARPCADARGHTGYLTFSRLKCL 310


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