BLASTX nr result

ID: Coptis24_contig00021778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021778
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267030.1| PREDICTED: chloroplast envelope membrane pro...   311   2e-82
ref|XP_002331392.1| predicted protein [Populus trichocarpa] gi|2...   302   9e-80
ref|XP_003516797.1| PREDICTED: chloroplast envelope membrane pro...   301   1e-79
ref|XP_002309032.1| predicted protein [Populus trichocarpa] gi|2...   300   4e-79
ref|XP_003532317.1| PREDICTED: chloroplast envelope membrane pro...   298   2e-78

>ref|XP_002267030.1| PREDICTED: chloroplast envelope membrane protein [Vitis vinifera]
           gi|297736012|emb|CBI24050.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score =  311 bits (796), Expect = 2e-82
 Identities = 147/169 (86%), Positives = 163/169 (96%)
 Frame = +1

Query: 1   VERARFRFEAEIGKSPPLSDEEVWLELRHKALELRDEWRLENRRAFANILSDMVFGITVF 180
           +ERARFR E EIGKSPPLSD+EVWLELRHKALELRDEWRLENRRAFANI SDMVFGI++F
Sbjct: 247 IERARFRLEVEIGKSPPLSDDEVWLELRHKALELRDEWRLENRRAFANIWSDMVFGISLF 306

Query: 181 ILLYFNQTKVALLKFTGYKIINNVSDTGKAFLIILITDIFLGYHSESGWQTLVELIVEHY 360
            LLYFNQ++VALLKFTGYKIINN+SDTGKAFLIILITDIFLGYHSESGWQTL+E++VEHY
Sbjct: 307 FLLYFNQSQVALLKFTGYKIINNISDTGKAFLIILITDIFLGYHSESGWQTLLEVVVEHY 366

Query: 361 GLEVDQAAMTIFVCTVPVVMDACVKLWLFKYLPRLSPRVTNIFREMTRH 507
           GLEVDQ+A+TIFVC +PVV+DACVKLWLFK+LPRLSPRV+NIFREM RH
Sbjct: 367 GLEVDQSAITIFVCLIPVVIDACVKLWLFKFLPRLSPRVSNIFREMKRH 415


>ref|XP_002331392.1| predicted protein [Populus trichocarpa] gi|222873606|gb|EEF10737.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score =  302 bits (773), Expect = 9e-80
 Identities = 142/169 (84%), Positives = 159/169 (94%)
 Frame = +1

Query: 1   VERARFRFEAEIGKSPPLSDEEVWLELRHKALELRDEWRLENRRAFANILSDMVFGITVF 180
           +E+AR + E EIGKSPPLSDEE W ELRHKALELRDEWRLENRR+FANI SDMVFG+++F
Sbjct: 272 LEKARLKLEVEIGKSPPLSDEEEWRELRHKALELRDEWRLENRRSFANIWSDMVFGVSIF 331

Query: 181 ILLYFNQTKVALLKFTGYKIINNVSDTGKAFLIILITDIFLGYHSESGWQTLVELIVEHY 360
           +LLYFNQ+KVALLKFTGYKI+NNVSDTGKAFLIILITDIFLGYHSESGWQTL+E+I EHY
Sbjct: 332 VLLYFNQSKVALLKFTGYKILNNVSDTGKAFLIILITDIFLGYHSESGWQTLLEVIFEHY 391

Query: 361 GLEVDQAAMTIFVCTVPVVMDACVKLWLFKYLPRLSPRVTNIFREMTRH 507
           GLEVDQ+A+TIF+C VPVV+DACVKLWLFKYLPRLSP+V NIFREM RH
Sbjct: 392 GLEVDQSAITIFICLVPVVIDACVKLWLFKYLPRLSPKVANIFREMKRH 440


>ref|XP_003516797.1| PREDICTED: chloroplast envelope membrane protein-like [Glycine max]
          Length = 433

 Score =  301 bits (772), Expect = 1e-79
 Identities = 142/168 (84%), Positives = 159/168 (94%)
 Frame = +1

Query: 4   ERARFRFEAEIGKSPPLSDEEVWLELRHKALELRDEWRLENRRAFANILSDMVFGITVFI 183
           ER RF  E EIGKSPPLSD+EVW ELRHKALELR+EWRLENRRAFANI SD V+GI++FI
Sbjct: 266 ERGRFELEVEIGKSPPLSDDEVWWELRHKALELREEWRLENRRAFANIWSDTVYGISLFI 325

Query: 184 LLYFNQTKVALLKFTGYKIINNVSDTGKAFLIILITDIFLGYHSESGWQTLVELIVEHYG 363
           +LYFN++KVALLKFTGYKIINN+SDTGKAFLIILITDIFLGYHSESGWQTL+E+IVEHYG
Sbjct: 326 ILYFNKSKVALLKFTGYKIINNISDTGKAFLIILITDIFLGYHSESGWQTLLEIIVEHYG 385

Query: 364 LEVDQAAMTIFVCTVPVVMDACVKLWLFKYLPRLSPRVTNIFREMTRH 507
           LEVDQ+A+TIF+C +PVV+DACVKLWLFK+LPRLSPRVTNIFREM RH
Sbjct: 386 LEVDQSAITIFICLIPVVIDACVKLWLFKFLPRLSPRVTNIFREMKRH 433


>ref|XP_002309032.1| predicted protein [Populus trichocarpa] gi|222855008|gb|EEE92555.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score =  300 bits (767), Expect = 4e-79
 Identities = 143/169 (84%), Positives = 158/169 (93%)
 Frame = +1

Query: 1   VERARFRFEAEIGKSPPLSDEEVWLELRHKALELRDEWRLENRRAFANILSDMVFGITVF 180
           VE+AR   E EIGKSPPLSDEE W ELRHKALELRD+WRLENRR+FANI SDMVFGI++F
Sbjct: 275 VEKARLLLEVEIGKSPPLSDEEEWWELRHKALELRDDWRLENRRSFANIWSDMVFGISIF 334

Query: 181 ILLYFNQTKVALLKFTGYKIINNVSDTGKAFLIILITDIFLGYHSESGWQTLVELIVEHY 360
           ILLYFNQ+KVALLKFTGYKI+NNV+D GKAFLIILITDIFLGYHSESGWQTL+++IVEHY
Sbjct: 335 ILLYFNQSKVALLKFTGYKILNNVTDIGKAFLIILITDIFLGYHSESGWQTLLDVIVEHY 394

Query: 361 GLEVDQAAMTIFVCTVPVVMDACVKLWLFKYLPRLSPRVTNIFREMTRH 507
           GLEVDQ+A+TIF+C VPVV+DACVKLWLFKYLPRLSPRV NIFREM RH
Sbjct: 395 GLEVDQSAITIFICLVPVVIDACVKLWLFKYLPRLSPRVANIFREMKRH 443


>ref|XP_003532317.1| PREDICTED: chloroplast envelope membrane protein-like [Glycine max]
          Length = 433

 Score =  298 bits (762), Expect = 2e-78
 Identities = 141/168 (83%), Positives = 158/168 (94%)
 Frame = +1

Query: 4   ERARFRFEAEIGKSPPLSDEEVWLELRHKALELRDEWRLENRRAFANILSDMVFGITVFI 183
           ER RF  E EIGKSPPLSD+EVW ELRH+ALELR+EWRLENRRAFANI SD V+GI++FI
Sbjct: 266 ERGRFELEVEIGKSPPLSDDEVWWELRHRALELREEWRLENRRAFANIWSDTVYGISLFI 325

Query: 184 LLYFNQTKVALLKFTGYKIINNVSDTGKAFLIILITDIFLGYHSESGWQTLVELIVEHYG 363
           LLYFN++KVALLKFTGYKIINN+SDTGKAFLIILITDIFLGYHSESGWQTL+E+IVEHYG
Sbjct: 326 LLYFNKSKVALLKFTGYKIINNISDTGKAFLIILITDIFLGYHSESGWQTLLEIIVEHYG 385

Query: 364 LEVDQAAMTIFVCTVPVVMDACVKLWLFKYLPRLSPRVTNIFREMTRH 507
           LEVDQ+A+TIF+C VPVV+DACVKLWLFK+LPRLSP VTNIF+EM RH
Sbjct: 386 LEVDQSAITIFICLVPVVIDACVKLWLFKFLPRLSPSVTNIFQEMKRH 433


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