BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021774
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    74   5e-11
ref|NP_001147018.1| ribosomal RNA apurinic site specific lyase [...    72   1e-10
emb|CAB91591.1| putative protein [Arabidopsis thaliana]                71   3e-10
ref|NP_191480.2| F-box/LRR-repeat protein [Arabidopsis thaliana]...    71   3e-10
ref|NP_568800.1| F-box/FBD/LRR-repeat protein [Arabidopsis thali...    70   4e-10

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
 Frame = +3

Query: 3   WRNLSTCLPNLEFDEEHYKGLKTK---NEDLADFEDMVNQTLNLHDKSDVQRFIVRINTA 173
           WR L   +P L+FD+E +    T     E +  F++ V+  L   + S +++F  R+   
Sbjct: 42  WRYLWASVPILDFDDELWLNPSTLVELEERIIMFQNFVDGVLRHSEVSCIKKF--RLGYR 99

Query: 174 PISFRHLSSWISFAVRHNVQDLTISRIGGTIQNLPSCLFTCRTLVVLEL-FNVRLKLPSV 350
             +   + SWI  A+   VQ+L +  +      LP   F C+TLVV++L   + L +P+ 
Sbjct: 100 DNNLDSVYSWICIALERRVQELDLHLLIDWRVELPPMFFICKTLVVVKLSCALFLDIPTT 159

Query: 351 IRIPLLKSLKLSIVRLFDQNLTNKLLSSCCCPVLESLSMTCCARDRNFSVTLS 509
           + +P LK+L L  V   D +   KLLS   CPVLE L +    RD  + V +S
Sbjct: 160 VWLPSLKALHLKSVEYSDDDSIQKLLSG--CPVLEELVIEREERDNQWVVNVS 210


>ref|NP_001147018.1| ribosomal RNA apurinic site specific lyase [Zea mays]
           gi|195606500|gb|ACG25080.1| ribosomal RNA apurinic site
           specific lyase [Zea mays]
          Length = 419

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 5/160 (3%)
 Frame = +3

Query: 3   WRNLSTCLPNLEFDEEHYKGLKTKNEDLADFEDMVNQTLNLHDKSDVQRFIVRINTAP-- 176
           W+ L   LP LEF +        ++E L   ++ VN+ L LH    +Q F++ +  +   
Sbjct: 34  WKFLWMSLPKLEFVD--------RDESLLVLKNFVNKNLPLHRAPVIQSFLLSLYESREK 85

Query: 177 -ISFRHLSSWISFAVRHNVQDLTISRIGGTIQNL-PSCLFTCRTLVVLEL-FNVRLKLPS 347
            I    +  W+  AV  ++++L +S      +N+ P+ LF C++LVVL+L F   + +PS
Sbjct: 86  NIKPEDIRQWVEIAVSRHLRELDVSYSSDNKENMVPNSLFACKSLVVLKLRFLTLMDVPS 145

Query: 348 VIRIPLLKSLKLSIVRLFDQNLTNKLLSSCCCPVLESLSM 467
              +P LK+L L +V   DQ     LLS   CPVLE L +
Sbjct: 146 TACLPSLKTLLLELVVYEDQKPFEALLS--ICPVLEDLEV 183


>emb|CAB91591.1| putative protein [Arabidopsis thaliana]
          Length = 491

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
 Frame = +3

Query: 3   WRNLSTCLPNLEFD--EEHYKGLKTKNEDLADFEDMVNQTLNLHDKSDVQRFIVRINTAP 176
           WR L   +PNL+FD     +  +  +++D   F D V++ L L  K  + +F ++     
Sbjct: 39  WRYLFALVPNLDFDVLPSLHPEVAMQDQDQTSFIDFVDRVLKLRGKDHINKFSLKCGDG- 97

Query: 177 ISFRHLSSWISFAVRHNVQDLTISRIGGTIQNLPSCLFTCRTLVVLEL---FNVRLKLPS 347
           I    +  WI   +RH V DL++      +  LPS +F  +TLV L++      R+KL +
Sbjct: 98  IEDEDVFPWILNTLRHGVSDLSLHVSPSLVYWLPSKVFASKTLVRLKIGPKDGPRVKLRN 157

Query: 348 VIRIPLLKSLKLSIVRLFDQNLTN--KLLSSCCCPVLESLSMTCCARDRNFSVTLS 509
           V  +P LK+L L  V +F++      KLLS   CPVLE LS+   A DR  S ++S
Sbjct: 158 VC-LPKLKTLNLDSV-VFEEGKIGFAKLLSG--CPVLEELSLLNLAWDRWDSCSVS 209


>ref|NP_191480.2| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|334186120|ref|NP_001190132.1| F-box/LRR-repeat
           protein [Arabidopsis thaliana]
           gi|334186122|ref|NP_001190133.1| F-box/LRR-repeat
           protein [Arabidopsis thaliana]
           gi|334186124|ref|NP_001190134.1| F-box/LRR-repeat
           protein [Arabidopsis thaliana]
           gi|75244355|sp|Q8GW80.1|FBL65_ARATH RecName:
           Full=F-box/LRR-repeat protein At3g59210
           gi|26453044|dbj|BAC43598.1| unknown protein [Arabidopsis
           thaliana] gi|332646368|gb|AEE79889.1| F-box/LRR-repeat
           protein [Arabidopsis thaliana]
           gi|332646369|gb|AEE79890.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana] gi|332646370|gb|AEE79891.1|
           F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|332646371|gb|AEE79892.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 484

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
 Frame = +3

Query: 3   WRNLSTCLPNLEFD--EEHYKGLKTKNEDLADFEDMVNQTLNLHDKSDVQRFIVRINTAP 176
           WR L   +PNL+FD     +  +  +++D   F D V++ L L  K  + +F ++     
Sbjct: 39  WRYLFALVPNLDFDVLPSLHPEVAMQDQDQTSFIDFVDRVLKLRGKDHINKFSLKCGDG- 97

Query: 177 ISFRHLSSWISFAVRHNVQDLTISRIGGTIQNLPSCLFTCRTLVVLEL---FNVRLKLPS 347
           I    +  WI   +RH V DL++      +  LPS +F  +TLV L++      R+KL +
Sbjct: 98  IEDEDVFPWILNTLRHGVSDLSLHVSPSLVYWLPSKVFASKTLVRLKIGPKDGPRVKLRN 157

Query: 348 VIRIPLLKSLKLSIVRLFDQNLTN--KLLSSCCCPVLESLSMTCCARDRNFSVTLS 509
           V  +P LK+L L  V +F++      KLLS   CPVLE LS+   A DR  S ++S
Sbjct: 158 VC-LPKLKTLNLDSV-VFEEGKIGFAKLLSG--CPVLEELSLLNLAWDRWDSCSVS 209


>ref|NP_568800.1| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75333820|sp|Q9FGQ3.1|FDL37_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At5g53840
           gi|10176949|dbj|BAB10069.1| unnamed protein product
           [Arabidopsis thaliana] gi|67633880|gb|AAY78864.1| F-box
           family protein [Arabidopsis thaliana]
           gi|332009029|gb|AED96412.1| F-box/FBD/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 444

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 1/162 (0%)
 Frame = +3

Query: 3   WRNLSTCLPNLEFDEEHYKGLKTKNEDLADFEDMVNQTLNLHDKSDVQRFIVRINTAPIS 182
           WRNL   +P L+FD    +         ++F         LH  S +Q+  V I     +
Sbjct: 50  WRNLWQLVPVLDFDSRELRSF-------SEFVSFAGSFFYLHKDSYIQKLRVCIYDLAGN 102

Query: 183 FRHLSSWISFAVRHNVQDLTISRIGGT-IQNLPSCLFTCRTLVVLELFNVRLKLPSVIRI 359
           + +L+SWI    RH +Q + IS    +    +P  L+TC TLV L+L  V +     + +
Sbjct: 103 Y-YLTSWIDLVTRHRIQHIDISVFTCSGFGVIPLSLYTCDTLVHLKLSRVTMVNVEFVSL 161

Query: 360 PLLKSLKLSIVRLFDQNLTNKLLSSCCCPVLESLSMTCCARD 485
           P LK L L  V   ++   +K++S  C PVLE L++   + D
Sbjct: 162 PCLKILDLDFVNFTNETTLDKIIS--CSPVLEELTIVKSSED 201