BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021773
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containi...   144   8e-33
ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containi...   144   8e-33
emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]   140   8e-32
ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31
emb|CBI39775.3| unnamed protein product [Vitis vinifera]              125   5e-27

>ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 583

 Score =  144 bits (363), Expect = 8e-33
 Identities = 72/123 (58%), Positives = 93/123 (75%)
 Frame = -1

Query: 371 HILKTNKPLSTLPLNRVASICALSPTNFPYAHSIFERVHNTSVNVIWNNCLKAFAEGESP 192
           H+LKTN PLS+LPL+RVAS+CA + ++F YA  IF+ +  + V   WN CL++FAEG+SP
Sbjct: 37  HLLKTNSPLSSLPLSRVASVCAFN-SSFSYAKLIFQLLDASEVTH-WNTCLRSFAEGDSP 94

Query: 191 IDALRLFYRLRYFNIMPDTFTCSFVLKACSLLSHFSSGVIVHALVEKRGFQSDLFLQNTI 12
            DA+ LFYRLR F+I PD +TCSFVLKACS L    +G IVH  VEK G QS++FLQN I
Sbjct: 95  ADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMI 154

Query: 11  LHM 3
           +H+
Sbjct: 155 VHL 157


>ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  144 bits (363), Expect = 8e-33
 Identities = 72/123 (58%), Positives = 93/123 (75%)
 Frame = -1

Query: 371 HILKTNKPLSTLPLNRVASICALSPTNFPYAHSIFERVHNTSVNVIWNNCLKAFAEGESP 192
           H+LKTN PLS+LPL+RVAS+CA + ++F YA  IF+ +  + V   WN CL++FAEG+SP
Sbjct: 37  HLLKTNSPLSSLPLSRVASVCAFN-SSFSYAKLIFQLLDASEVTH-WNTCLRSFAEGDSP 94

Query: 191 IDALRLFYRLRYFNIMPDTFTCSFVLKACSLLSHFSSGVIVHALVEKRGFQSDLFLQNTI 12
            DA+ LFYRLR F+I PD +TCSFVLKACS L    +G IVH  VEK G QS++FLQN I
Sbjct: 95  ADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMI 154

Query: 11  LHM 3
           +H+
Sbjct: 155 VHL 157


>emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
          Length = 606

 Score =  140 bits (354), Expect = 8e-32
 Identities = 70/123 (56%), Positives = 90/123 (73%), Gaps = 1/123 (0%)
 Frame = -1

Query: 368 ILKTNKPLSTLPLNRVASICALSPTNFPYAHSIFERVHNTSVNV-IWNNCLKAFAEGESP 192
           I+KTN PLS LPL RV  +CA +P+ F YA  IFE V        +WN+CLKA AEG+SP
Sbjct: 51  IIKTNAPLSILPLTRVGLVCAFTPS-FHYAQQIFECVEKQKPETFVWNSCLKALAEGDSP 109

Query: 191 IDALRLFYRLRYFNIMPDTFTCSFVLKACSLLSHFSSGVIVHALVEKRGFQSDLFLQNTI 12
           IDA+ LFYRLR +++ PDTFTCS VL+AC  L   S+G I+H +VEK GF+S+L+LQN I
Sbjct: 110 IDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMI 169

Query: 11  LHM 3
           +H+
Sbjct: 170 VHL 172


>ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  139 bits (350), Expect = 2e-31
 Identities = 69/123 (56%), Positives = 90/123 (73%), Gaps = 1/123 (0%)
 Frame = -1

Query: 368 ILKTNKPLSTLPLNRVASICALSPTNFPYAHSIFERVHNTSVNV-IWNNCLKAFAEGESP 192
           I+KTN PLS LPL RV  +CA +P+ F YA  IF+ V        +WN+CLKA AEG+SP
Sbjct: 51  IIKTNAPLSILPLTRVGLVCAFTPS-FHYAQQIFKCVEKQKPETFVWNSCLKALAEGDSP 109

Query: 191 IDALRLFYRLRYFNIMPDTFTCSFVLKACSLLSHFSSGVIVHALVEKRGFQSDLFLQNTI 12
           IDA+ LFYRLR +++ PDTFTCS VL+AC  L   S+G I+H +VEK GF+S+L+LQN I
Sbjct: 110 IDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMI 169

Query: 11  LHM 3
           +H+
Sbjct: 170 VHL 172


>emb|CBI39775.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score =  125 bits (313), Expect = 5e-27
 Identities = 63/112 (56%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
 Frame = -1

Query: 368 ILKTNKPLSTLPLNRVASICALSPTNFPYAHSIFERVHNTSVNV-IWNNCLKAFAEGESP 192
           I+KTN PLS LPL RV  +CA +P+ F YA  IF+ V        +WN+CLKA AEG+SP
Sbjct: 84  IIKTNAPLSILPLTRVGLVCAFTPS-FHYAQQIFKCVEKQKPETFVWNSCLKALAEGDSP 142

Query: 191 IDALRLFYRLRYFNIMPDTFTCSFVLKACSLLSHFSSGVIVHALVEKRGFQS 36
           IDA+ LFYRLR +++ PDTFTCS VL+AC  L   S+G I+H +VEK GF+S
Sbjct: 143 IDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRS 194