BLASTX nr result
ID: Coptis24_contig00021771
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00021771
(868 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera] 125 7e-58
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 125 5e-57
gb|AAT38766.2| Polyprotein, putative [Solanum demissum] 135 1e-49
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 129 3e-49
emb|CAN66626.1| hypothetical protein VITISV_001861 [Vitis vinifera] 127 3e-47
>emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera]
Length = 313
Score = 125 bits (315), Expect(3) = 7e-58
Identities = 60/86 (69%), Positives = 68/86 (79%)
Frame = -3
Query: 755 GYNDAN*IVDSTESKSTSGYVFTLAGGVVSWKSTK*TCIAHSTMESEFIALDKASEEAEW 576
GY+DAN I + +SKS SGYVFTL G SWKS+K T IA STMESEFIALDK EEAEW
Sbjct: 157 GYSDANWISNVKDSKSHSGYVFTLGGAAXSWKSSKQTVIARSTMESEFIALDKCGEEAEW 216
Query: 575 IRNFLMDIPLWPKPVPPVSIHCDSQA 498
+R+FL DIP W KPVPP+ IHCDSQ+
Sbjct: 217 LRHFLEDIPRWSKPVPPICIHCDSQS 242
Score = 96.3 bits (238), Expect(3) = 7e-58
Identities = 46/73 (63%), Positives = 59/73 (80%)
Frame = -2
Query: 495 QAAIMRVQNNSYNGKSQHIRRRQNTM*QMLRDGIIAIDFVRSKDNLADPLTKGLARELVF 316
Q+AI R +N YNGKS+HIRRR NT+ Q+L G+I++D+V+SKDN+ADPLTKGL RELV
Sbjct: 241 QSAIGRAXSNMYNGKSRHIRRRHNTIRQLLSTGVISVDYVKSKDNIADPLTKGLNRELVE 300
Query: 315 SIWRGMGLKSVKD 277
RGMGLK +K+
Sbjct: 301 KSSRGMGLKPIKE 313
Score = 50.1 bits (118), Expect(3) = 7e-58
Identities = 20/33 (60%), Positives = 28/33 (84%)
Frame = -2
Query: 852 KQHRALIRVLRYLKYTSDFGVHYGRYPAVLEGW 754
K + +IRVL+YL++T D+G+HY RYPAVLEG+
Sbjct: 126 KHWQGIIRVLKYLRFTRDYGLHYTRYPAVLEGY 158
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 125 bits (314), Expect(3) = 5e-57
Identities = 60/86 (69%), Positives = 68/86 (79%)
Frame = -3
Query: 755 GYNDAN*IVDSTESKSTSGYVFTLAGGVVSWKSTK*TCIAHSTMESEFIALDKASEEAEW 576
GY+DAN I + +SKS SGYVFTL G VSWKS+K IA STMESEFIALDK EEAEW
Sbjct: 1121 GYSDANWISNVKDSKSHSGYVFTLGGAAVSWKSSKQXVIARSTMESEFIALDKCGEEAEW 1180
Query: 575 IRNFLMDIPLWPKPVPPVSIHCDSQA 498
+R+FL DIP W KPVPP+ IHCDSQ+
Sbjct: 1181 LRHFLEDIPRWSKPVPPICIHCDSQS 1206
Score = 93.6 bits (231), Expect(3) = 5e-57
Identities = 45/73 (61%), Positives = 58/73 (79%)
Frame = -2
Query: 495 QAAIMRVQNNSYNGKSQHIRRRQNTM*QMLRDGIIAIDFVRSKDNLADPLTKGLARELVF 316
Q+AI R Q+N YNGKS+HI RR NT+ Q+L G+I++D+V+SKDN+ADPLTKGL RELV
Sbjct: 1205 QSAIGRAQSNMYNGKSRHIXRRHNTIRQLLSTGVISVDYVKSKDNIADPLTKGLNRELVE 1264
Query: 315 SIWRGMGLKSVKD 277
RGM LK +K+
Sbjct: 1265 KSSRGMXLKPIKE 1277
Score = 50.1 bits (118), Expect(3) = 5e-57
Identities = 20/33 (60%), Positives = 28/33 (84%)
Frame = -2
Query: 852 KQHRALIRVLRYLKYTSDFGVHYGRYPAVLEGW 754
K + +IRVL+YL++T D+G+HY RYPAVLEG+
Sbjct: 1090 KHWQGIIRVLKYLRFTRDYGLHYTRYPAVLEGY 1122
>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
Length = 1355
Score = 135 bits (340), Expect(3) = 1e-49
Identities = 64/86 (74%), Positives = 71/86 (82%)
Frame = -3
Query: 755 GYNDAN*IVDSTESKSTSGYVFTLAGGVVSWKSTK*TCIAHSTMESEFIALDKASEEAEW 576
GY+DAN I S E KSTSGYVFTL G VSWKS+K TCIA STMES+FIALDKA +EAEW
Sbjct: 1106 GYSDANWITGSNEVKSTSGYVFTLGRGAVSWKSSKQTCIARSTMESKFIALDKAGKEAEW 1165
Query: 575 IRNFLMDIPLWPKPVPPVSIHCDSQA 498
++NFL DIP WPKPV P+ IHCDSQA
Sbjct: 1166 LQNFLEDIPFWPKPVGPICIHCDSQA 1191
Score = 72.4 bits (176), Expect(3) = 1e-49
Identities = 35/54 (64%), Positives = 44/54 (81%)
Frame = -2
Query: 495 QAAIMRVQNNSYNGKSQHIRRRQNTM*QMLRDGIIAIDFVRSKDNLADPLTKGL 334
QAAI R ++ YNGKS+HIR RQNT+ Q+L GII ID+V+S DN++DPLTKGL
Sbjct: 1190 QAAIGRARSVMYNGKSRHIRWRQNTVRQLLSSGIITIDYVKSSDNVSDPLTKGL 1243
Score = 36.2 bits (82), Expect(3) = 1e-49
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = -2
Query: 840 ALIRVLRYLKYTSDFGVHYGRYPAVLEGW 754
A+ VL YLK++ + +HY +YPA++EG+
Sbjct: 1079 AMKHVLGYLKHSQHYALHYNKYPAMIEGY 1107
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 129 bits (323), Expect(2) = 3e-49
Identities = 68/113 (60%), Positives = 79/113 (69%), Gaps = 5/113 (4%)
Frame = -3
Query: 821 GILNILQILVFIMADIQLY*R-----GGYNDAN*IVDSTESKSTSGYVFTLAGGVVSWKS 657
GI+ +L+ L F Y R GY+DAN I + +SKS SGYVFTL G VSWKS
Sbjct: 1133 GIIRVLKYLRFTRDYXLHYTRYPAVLEGYSDANWISNVKDSKSHSGYVFTLGGAAVSWKS 1192
Query: 656 TK*TCIAHSTMESEFIALDKASEEAEWIRNFLMDIPLWPKPVPPVSIHCDSQA 498
+K T IA STMESEFIALDK EEAEW+R+FL DIP W KPVPP+ IHCDSQ+
Sbjct: 1193 SKQTVIARSTMESEFIALDKCGEEAEWLRHFLEDIPRWSKPVPPICIHCDSQS 1245
Score = 93.6 bits (231), Expect(2) = 3e-49
Identities = 45/73 (61%), Positives = 58/73 (79%)
Frame = -2
Query: 495 QAAIMRVQNNSYNGKSQHIRRRQNTM*QMLRDGIIAIDFVRSKDNLADPLTKGLARELVF 316
Q+AI R Q+N YNGKS+HIRRR NT+ Q+L G+I++D+V+SKDN+ADPLTKGL RELV
Sbjct: 1244 QSAIGRAQSNMYNGKSRHIRRRHNTIRQLLSTGVISVDYVKSKDNIADPLTKGLNRELVE 1303
Query: 315 SIWRGMGLKSVKD 277
GM LK +K+
Sbjct: 1304 KSSXGMXLKPIKE 1316
>emb|CAN66626.1| hypothetical protein VITISV_001861 [Vitis vinifera]
Length = 422
Score = 127 bits (320), Expect(2) = 3e-47
Identities = 62/85 (72%), Positives = 69/85 (81%)
Frame = -3
Query: 752 YNDAN*IVDSTESKSTSGYVFTLAGGVVSWKSTK*TCIAHSTMESEFIALDKASEEAEWI 573
Y+DAN I DS +SKSTSGYVFTL G VSWKS+K TCIA STMESEFIA+DKA EEAE +
Sbjct: 268 YSDANWISDSKDSKSTSGYVFTLGGAAVSWKSSKQTCIARSTMESEFIAIDKAGEEAEXL 327
Query: 572 RNFLMDIPLWPKPVPPVSIHCDSQA 498
RNFL DIP W KPV + IHCDSQ+
Sbjct: 328 RNFLEDIPNWSKPVXAICIHCDSQS 352
Score = 87.8 bits (216), Expect(2) = 3e-47
Identities = 44/72 (61%), Positives = 57/72 (79%)
Frame = -2
Query: 495 QAAIMRVQNNSYNGKSQHIRRRQNTM*QMLRDGIIAIDFVRSKDNLADPLTKGLARELVF 316
Q+ I R Q+++YN KS+HIRR NT+ Q+L +GII+ID+VRSKDN+AD LTKGL RE V
Sbjct: 351 QSTIGRAQSHNYNXKSRHIRRXHNTVRQLLSNGIISIDYVRSKDNIADXLTKGLTREQVE 410
Query: 315 SIWRGMGLKSVK 280
S +GMGLK +K
Sbjct: 411 SSSKGMGLKPMK 422