BLASTX nr result

ID: Coptis24_contig00021770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021770
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316396.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
ref|XP_002330621.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_003561027.1| PREDICTED: probable LRR receptor-like serine...   106   2e-21
emb|CBI25502.3| unnamed protein product [Vitis vinifera]              105   3e-21
ref|XP_003616620.1| Receptor-like protein kinase [Medicago trunc...   104   9e-21

>ref|XP_002316396.1| predicted protein [Populus trichocarpa] gi|222865436|gb|EEF02567.1|
            predicted protein [Populus trichocarpa]
          Length = 1006

 Score =  109 bits (273), Expect = 2e-22
 Identities = 61/134 (45%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
 Frame = +2

Query: 2    MGGPVSTQGDVYSYGILLLEMLTRKKPTDDMFVDGLSLHKYAELALPNQVVEIVDPNVLV 181
            +G  VST GDVYSYGILLLE+LT K PTD  F +GL+LHKY ++ALP++VVE+VDP +L 
Sbjct: 880  IGNEVSTYGDVYSYGILLLEILTGKTPTDGSFKEGLNLHKYVKMALPDRVVEVVDPILLR 939

Query: 182  EENDKLLDIAGGIST--RDRLKDCLISTIRLGVTXXXXXXXXXXXXXXXVTCSADSSAER 355
            E      + + G+     D++ +CL+S + +G                 V+CS D   ER
Sbjct: 940  EIEQTSANASDGMKRIGNDKVLECLVSIMEVG-----------------VSCSVDLPRER 982

Query: 356  MNMKEVVRELHRIR 397
             N+  VV ELHRIR
Sbjct: 983  TNISNVVAELHRIR 996


>ref|XP_002330621.1| predicted protein [Populus trichocarpa] gi|222872225|gb|EEF09356.1|
            predicted protein [Populus trichocarpa]
          Length = 774

 Score =  106 bits (265), Expect = 2e-21
 Identities = 61/139 (43%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
 Frame = +2

Query: 2    MGGPVSTQGDVYSYGILLLEMLTRKKPTDDMFVDGLSLHKYAELALPNQVVEIVDPNVLV 181
            +G  VST GDVYS+GILLLEM T K+PT+ MF DGL+LH YAE+AL  +V E+V+P +L 
Sbjct: 637  VGSDVSTYGDVYSFGILLLEMFTGKRPTEGMFKDGLNLHNYAEMALHGRVSEVVEPILLR 696

Query: 182  EENDKLLDIAGGIS--TRDRLKDCLISTIRLGVTXXXXXXXXXXXXXXXVTCSADSSAER 355
            E+ ++ +  +  ++     ++ +CLIS I++G                 V CS +   ER
Sbjct: 697  EDVERSIHSSHRMNHIETGKILECLISIIKIG-----------------VACSVELPRER 739

Query: 356  MNMKEVVRELHRIRDYNQG 412
            M+M  VV ELHRIRD   G
Sbjct: 740  MDMSIVVAELHRIRDILSG 758


>ref|XP_003561027.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Brachypodium distachyon]
          Length = 1037

 Score =  106 bits (264), Expect = 2e-21
 Identities = 57/134 (42%), Positives = 78/134 (58%)
 Frame = +2

Query: 5    GGPVSTQGDVYSYGILLLEMLTRKKPTDDMFVDGLSLHKYAELALPNQVVEIVDPNVLVE 184
            G P+ST GDVYS GILLLEM T + PTDDMF + L LHKY+E A P++++EI DP + + 
Sbjct: 916  GSPISTLGDVYSLGILLLEMFTGRSPTDDMFRESLDLHKYSEAAHPDRILEIADPAIWLH 975

Query: 185  ENDKLLDIAGGISTRDRLKDCLISTIRLGVTXXXXXXXXXXXXXXXVTCSADSSAERMNM 364
             +      A   STR R+++CL S IR+G                 ++CS     ERM +
Sbjct: 976  ND------ANDNSTRSRVQECLASAIRIG-----------------ISCSKQQPRERMPI 1012

Query: 365  KEVVRELHRIRDYN 406
            ++   E+H IRD N
Sbjct: 1013 QDAAMEMHAIRDAN 1026


>emb|CBI25502.3| unnamed protein product [Vitis vinifera]
          Length = 978

 Score =  105 bits (263), Expect = 3e-21
 Identities = 59/134 (44%), Positives = 85/134 (63%)
 Frame = +2

Query: 2   MGGPVSTQGDVYSYGILLLEMLTRKKPTDDMFVDGLSLHKYAELALPNQVVEIVDPNVLV 181
           +GG VS QGDVYSYGILLLEM T K+PT+DMF DGLSLH  +++A P +V+EIVD N++ 
Sbjct: 539 IGGLVSPQGDVYSYGILLLEMFTGKRPTEDMFSDGLSLHNLSKMAFPERVMEIVDSNLVG 598

Query: 182 EENDKLLDIAGGISTRDRLKDCLISTIRLGVTXXXXXXXXXXXXXXXVTCSADSSAERMN 361
           E ++            DR+  CL+S  R+G                 V CS +S+++RM+
Sbjct: 599 ELDE------------DRMYHCLVSFARIG-----------------VACSEESASDRMD 629

Query: 362 MKEVVRELHRIRDY 403
           +K+VV EL+ I+++
Sbjct: 630 IKDVVIELNIIKEH 643


>ref|XP_003616620.1| Receptor-like protein kinase [Medicago truncatula]
            gi|355517955|gb|AES99578.1| Receptor-like protein kinase
            [Medicago truncatula]
          Length = 1002

 Score =  104 bits (259), Expect = 9e-21
 Identities = 57/132 (43%), Positives = 81/132 (61%)
 Frame = +2

Query: 2    MGGPVSTQGDVYSYGILLLEMLTRKKPTDDMFVDGLSLHKYAELALPNQVVEIVDPNVLV 181
            +GG VS QGD+YSYGILLLEMLT KKPTD+MF +GLSLHK  ++A+P ++ EI D  +LV
Sbjct: 889  VGGKVSPQGDIYSYGILLLEMLTAKKPTDNMFCEGLSLHKLCKMAIPQKITEIADTQLLV 948

Query: 182  EENDKLLDIAGGISTRDRLKDCLISTIRLGVTXXXXXXXXXXXXXXXVTCSADSSAERMN 361
              +++   I       +  ++ L+S  R+G                 V CSA+  A+RM 
Sbjct: 949  PSSEEQTGI------MEDQRESLVSFARIG-----------------VACSAEYPAQRMC 985

Query: 362  MKEVVRELHRIR 397
            +K+V+ ELH I+
Sbjct: 986  IKDVITELHAIK 997


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