BLASTX nr result

ID: Coptis24_contig00021763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021763
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275586.2| PREDICTED: uncharacterized protein LOC100256...    66   3e-09
emb|CAN73361.1| hypothetical protein VITISV_006165 [Vitis vinifera]    66   3e-09
ref|XP_002304521.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002272827.2| PREDICTED: uncharacterized protein LOC100243...    57   1e-06
emb|CAN82727.1| hypothetical protein VITISV_040324 [Vitis vinifera]    57   1e-06

>ref|XP_002275586.2| PREDICTED: uncharacterized protein LOC100256919 [Vitis vinifera]
          Length = 881

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/39 (71%), Positives = 36/39 (92%)
 Frame = +1

Query: 61  LPSDQNWRPAGRMRGVLSGQAYSAALSQYMVQPTQSVQA 177
           LP+D+NWRP+GRMRG L+G+AYSAAL+Q+M+QPTQ  QA
Sbjct: 783 LPTDENWRPSGRMRGSLTGEAYSAALNQFMLQPTQPTQA 821


>emb|CAN73361.1| hypothetical protein VITISV_006165 [Vitis vinifera]
          Length = 845

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/39 (71%), Positives = 36/39 (92%)
 Frame = +1

Query: 61  LPSDQNWRPAGRMRGVLSGQAYSAALSQYMVQPTQSVQA 177
           LP+D+NWRP+GRMRG L+G+AYSAAL+Q+M+QPTQ  QA
Sbjct: 744 LPTDENWRPSGRMRGSLTGEAYSAALNQFMLQPTQPTQA 782


>ref|XP_002304521.1| predicted protein [Populus trichocarpa] gi|222841953|gb|EEE79500.1|
           predicted protein [Populus trichocarpa]
          Length = 822

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/56 (57%), Positives = 40/56 (71%)
 Frame = +1

Query: 7   GHRGVNTTHVARSNILNELPSDQNWRPAGRMRGVLSGQAYSAALSQYMVQPTQSVQ 174
           G+ G     V+ +  L +L S+QNWRP GRMRG LSG+AYSAAL ++MVQPTQ  Q
Sbjct: 716 GNAGGALPAVSGTEGLVDLASEQNWRPTGRMRGSLSGRAYSAALKEFMVQPTQQTQ 771


>ref|XP_002272827.2| PREDICTED: uncharacterized protein LOC100243215 [Vitis vinifera]
          Length = 920

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/48 (54%), Positives = 36/48 (75%)
 Frame = +1

Query: 34  VARSNILNELPSDQNWRPAGRMRGVLSGQAYSAALSQYMVQPTQSVQA 177
           V+R   L +L S+QNWRP G MRG L G+AY++AL+Q ++QPTQ  Q+
Sbjct: 814 VSRPESLVDLASEQNWRPTGLMRGSLVGRAYNSALNQLVIQPTQPTQS 861


>emb|CAN82727.1| hypothetical protein VITISV_040324 [Vitis vinifera]
          Length = 901

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/48 (54%), Positives = 36/48 (75%)
 Frame = +1

Query: 34  VARSNILNELPSDQNWRPAGRMRGVLSGQAYSAALSQYMVQPTQSVQA 177
           V+R   L +L S+QNWRP G MRG L G+AY++AL+Q ++QPTQ  Q+
Sbjct: 795 VSRPESLVDLASEQNWRPTGLMRGSLVGRAYNSALNQLVIQPTQPTQS 842


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