BLASTX nr result

ID: Coptis24_contig00021755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021755
         (1341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73956.1| hypothetical protein VITISV_026134 [Vitis vinifera]   192   1e-46
ref|XP_002305873.1| predicted protein [Populus trichocarpa] gi|2...   188   2e-45
ref|XP_002515460.1| conserved hypothetical protein [Ricinus comm...   186   2e-44
emb|CBI33549.3| unnamed protein product [Vitis vinifera]              184   5e-44
ref|XP_003616389.1| hypothetical protein MTR_5g079680 [Medicago ...   169   2e-39

>emb|CAN73956.1| hypothetical protein VITISV_026134 [Vitis vinifera]
          Length = 389

 Score =  192 bits (489), Expect = 1e-46
 Identities = 112/232 (48%), Positives = 137/232 (59%), Gaps = 25/232 (10%)
 Frame = -1

Query: 1299 MKRKKWTEAEEETLIKKYSELQTTGILSKLKTREKKYQPIAVQVNTQHHLQDPITYPFSW 1120
            MKRKKW+E EE+TL+ KYSEL T+G L+KLKTREKK++PIA  VN+ HHL DPIT+PF W
Sbjct: 1    MKRKKWSEVEEQTLLTKYSELLTSGTLAKLKTREKKFKPIADHVNSVHHLHDPITFPFKW 60

Query: 1119 SWRDVSIKIQNMRHQYLGVKQKIKTSDGLGDFIWTDGIDHWTNFLKYKDVFGDVELDTFT 940
            SWRDVSIK+QNMRHQYLGVKQKI+ S+   +F W DG +HW NFLKYK+VFGDVEL+   
Sbjct: 61   SWRDVSIKVQNMRHQYLGVKQKIRVSE--DEFNWKDGENHWENFLKYKEVFGDVELEA-- 116

Query: 939  HHHHHKLRVSGAG-------------------SMEDEEEEGRFVFDSLG--GLRFDYXXX 823
                 KL     G                     +DEEE+   V D LG  G   D+   
Sbjct: 117  --KEKKLGGDDVGLFDDSGVLGLGFGIDCEDLDEDDEEEDDEDVDDELGEDGSEGDFGGE 174

Query: 822  XXXXXXXXXXXDFGSSDNDNSLFRGKRLKKDDG----IGFLGSQVLEMRDVL 679
                             +D    R K+ K+  G     G +GSQVLE+RDV+
Sbjct: 175  RRV--------------DDLGSVRAKKFKRGFGFGRRFGLVGSQVLELRDVV 212



 Score = 90.5 bits (223), Expect = 9e-16
 Identities = 50/78 (64%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = -1

Query: 375 QIEHEKQMMQMQADACQNQMQVLGVFVRLVCQFFGSGN-XXXXXXXXXXXXXXQNLQHQS 199
           QIEHEKQMMQM ADACQNQMQ+LGV  RLVCQFFGS N               QNLQH  
Sbjct: 313 QIEHEKQMMQMHADACQNQMQILGVMARLVCQFFGSANDGLGGGLGALPPQVLQNLQHPV 372

Query: 198 DLVGDNGKPDVHSDSHFM 145
            L GDNGKPD +S S FM
Sbjct: 373 GL-GDNGKPDANSPSQFM 389


>ref|XP_002305873.1| predicted protein [Populus trichocarpa] gi|222848837|gb|EEE86384.1|
            predicted protein [Populus trichocarpa]
          Length = 398

 Score =  188 bits (478), Expect = 2e-45
 Identities = 112/230 (48%), Positives = 142/230 (61%), Gaps = 23/230 (10%)
 Frame = -1

Query: 1299 MKRKKWTEAEEETLIKKYSELQTTGILSKLKTREKKYQPIAVQVNTQHHLQDPITYPFSW 1120
            MKRKKW+E EE+TL+ KYS+L T+G LSKLKTREKK++PIA  VNT HHLQDPI YPF W
Sbjct: 1    MKRKKWSELEEQTLLSKYSDLLTSGTLSKLKTREKKFRPIADHVNTIHHLQDPIGYPFKW 60

Query: 1119 SWRDVSIKIQNMRHQYLGVKQKIKTSDGLGDFIWTDGIDHWTNFLKYKDVFGDVELDTFT 940
            SWRDVSIK+QNMRHQYLGVKQKI+ S    +F W DG +HW NFLKYK+VFGDVEL+   
Sbjct: 61   SWRDVSIKVQNMRHQYLGVKQKIRISK--DEFNWKDGENHWENFLKYKEVFGDVELEV-- 116

Query: 939  HHHHHKLRVSGAGSMEDEEEEG--RFVFDSLGGLRFDYXXXXXXXXXXXXXXDFGSSDN- 769
                   + SG+G  +  ++ G   F  DS   L  D                 G +DN 
Sbjct: 117  ----KSKKSSGSGDSDLFKDCGDLGFGIDSEDYLEED-DQEEEDGEEEEDVNGDGGNDNV 171

Query: 768  ----DNSLFRG------------KRLKKDDG----IGFLGSQVLEMRDVL 679
                ++  FRG            +++KK  G    +G LG+QV+++RDV+
Sbjct: 172  GGGEEDGEFRGEKGNGEMGIGRKEKMKKGLGGNRRLGLLGAQVMDLRDVV 221



 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 45/78 (57%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
 Frame = -1

Query: 375 QIEHEKQMMQMQADACQNQMQVLGVFVRLVCQFFGSGN-XXXXXXXXXXXXXXQNLQHQS 199
           QIEHEK MMQ+ ADACQNQMQ+LGV  R +CQFFGS N               QNLQH  
Sbjct: 322 QIEHEKAMMQIHADACQNQMQILGVMARFICQFFGSANDGLGGGLGGLPPQVLQNLQHPG 381

Query: 198 DLVGDNGKPDVHSDSHFM 145
            L GD+GKPD +S S FM
Sbjct: 382 GL-GDSGKPDANSPSEFM 398


>ref|XP_002515460.1| conserved hypothetical protein [Ricinus communis]
            gi|223545404|gb|EEF46909.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 391

 Score =  186 bits (471), Expect = 2e-44
 Identities = 103/226 (45%), Positives = 134/226 (59%), Gaps = 19/226 (8%)
 Frame = -1

Query: 1299 MKRKKWTEAEEETLIKKYSELQTTGILSKLKTREKKYQPIAVQVNTQHHLQDPITYPFSW 1120
            MKRKKW+E EE+TL+ KYS+L T+G LSKLKTREKK++PIA  VN+ HHLQDPI++PF W
Sbjct: 1    MKRKKWSELEEQTLLTKYSDLLTSGTLSKLKTREKKFRPIADHVNSVHHLQDPISFPFKW 60

Query: 1119 SWRDVSIKIQNMRHQYLGVKQKIKTSDGLGDFIWTDGIDHWTNFLKYKDVFGDVEL---- 952
            SWRDVSIK+QNMRHQYLGVKQKI+ S    +F W DG +HW NFLKYK+VFGDVEL    
Sbjct: 61   SWRDVSIKVQNMRHQYLGVKQKIRISK--DEFNWKDGENHWENFLKYKEVFGDVELEVKS 118

Query: 951  ---------DTFTHHHHHKLRVSGAGSMEDEEEEGRFVFDSLGGLRFDYXXXXXXXXXXX 799
                     D F         +      E+EEE+G    ++                   
Sbjct: 119  KKLSDSCGSDLFKDCGDLGFGIDSEDLEEEEEEDGEEEGEN---------GDDDNVNGGE 169

Query: 798  XXXDFGSSDNDNSLFRGKRLKKDDG------IGFLGSQVLEMRDVL 679
                FG    +  +   ++ K  +G      +G LG+QV+++RDV+
Sbjct: 170  EEGGFGGEKGNGDMGIAQKAKAKNGFGRNRRLGLLGAQVVDLRDVV 215



 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 44/77 (57%), Positives = 49/77 (63%)
 Frame = -1

Query: 375 QIEHEKQMMQMQADACQNQMQVLGVFVRLVCQFFGSGNXXXXXXXXXXXXXXQNLQHQSD 196
           QIEHEK MMQ+ ADACQNQMQ+LGV  RL+CQFFG  +              QNLQH   
Sbjct: 316 QIEHEKAMMQIHADACQNQMQILGVVARLICQFFGVNDGLGGGLGGLTPQVLQNLQHPGG 375

Query: 195 LVGDNGKPDVHSDSHFM 145
           L  DNGKPD +S S FM
Sbjct: 376 L-SDNGKPDTNSPSEFM 391


>emb|CBI33549.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score =  184 bits (467), Expect = 5e-44
 Identities = 90/148 (60%), Positives = 113/148 (76%), Gaps = 1/148 (0%)
 Frame = -1

Query: 1299 MKRKKWTEAEEETLIKKYSELQTTGILSKLKTREKKYQPIAVQVNTQHHLQDPITYPFSW 1120
            MKRKKW+E EE+TL+ KYSEL T+G L+KLKTREKK++PIA  VN+ HHL DPIT+PF W
Sbjct: 1    MKRKKWSEVEEQTLLTKYSELLTSGTLAKLKTREKKFKPIADHVNSVHHLHDPITFPFKW 60

Query: 1119 SWRDVSIKIQNMRHQYLGVKQKIKTSDGLGDFIWTDGIDHWTNFLKYKDVFGDVELDTFT 940
            SWRDVSIK+QNMRHQYLGVKQKI+ S+   +F W DG +HW NFLKYK+VFGDVEL+   
Sbjct: 61   SWRDVSIKVQNMRHQYLGVKQKIRVSE--DEFNWKDGENHWENFLKYKEVFGDVELEA-- 116

Query: 939  HHHHHKLRVSGAGSMEDE-EEEGRFVFD 859
                 + ++ G   ++DE  E+G  V +
Sbjct: 117  ----KEKKLGGDDDVDDELGEDGSEVLE 140



 Score = 90.5 bits (223), Expect = 9e-16
 Identities = 50/78 (64%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = -1

Query: 375 QIEHEKQMMQMQADACQNQMQVLGVFVRLVCQFFGSGN-XXXXXXXXXXXXXXQNLQHQS 199
           QIEHEKQMMQM ADACQNQMQ+LGV  RLVCQFFGS N               QNLQH  
Sbjct: 246 QIEHEKQMMQMHADACQNQMQILGVMARLVCQFFGSANDGLGGGLGALPPQVLQNLQHPV 305

Query: 198 DLVGDNGKPDVHSDSHFM 145
            L GDNGKPD +S S FM
Sbjct: 306 GL-GDNGKPDANSPSQFM 322


>ref|XP_003616389.1| hypothetical protein MTR_5g079680 [Medicago truncatula]
            gi|355517724|gb|AES99347.1| hypothetical protein
            MTR_5g079680 [Medicago truncatula]
          Length = 328

 Score =  169 bits (428), Expect = 2e-39
 Identities = 77/116 (66%), Positives = 92/116 (79%)
 Frame = -1

Query: 1299 MKRKKWTEAEEETLIKKYSELQTTGILSKLKTREKKYQPIAVQVNTQHHLQDPITYPFSW 1120
            MKRKKW+E EE+TL+ KYSEL  +G L KLKTREKK++PIA  VN  HHL DP T+PF W
Sbjct: 1    MKRKKWSELEEQTLLTKYSELHRSGTLPKLKTREKKFKPIADHVNAVHHLHDPTTFPFKW 60

Query: 1119 SWRDVSIKIQNMRHQYLGVKQKIKTSDGLGDFIWTDGIDHWTNFLKYKDVFGDVEL 952
            SWRDVSIK+QNMRHQY+GVK KI+++D    F W DG+ HW NFL YK VFGDV++
Sbjct: 61   SWRDVSIKVQNMRHQYIGVKHKIQSND--HGFNWNDGVIHWENFLNYKRVFGDVKI 114



 Score = 74.3 bits (181), Expect = 7e-11
 Identities = 42/77 (54%), Positives = 45/77 (58%)
 Frame = -1

Query: 375 QIEHEKQMMQMQADACQNQMQVLGVFVRLVCQFFGSGNXXXXXXXXXXXXXXQNLQHQSD 196
           QIEHEKQMMQM A+AC NQMQVLGV  R++CQFFGSGN                L H   
Sbjct: 255 QIEHEKQMMQMHAEACHNQMQVLGVMARILCQFFGSGNDGLGGAGLGTLPTQV-LHHGGG 313

Query: 195 LVGDNGKPDVHSDSHFM 145
           L   N KPD  S S FM
Sbjct: 314 L--GNVKPDASSPSEFM 328


Top