BLASTX nr result

ID: Coptis24_contig00021754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021754
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234831.1| TCP transcription factor 11 [Solanum lycoper...    75   1e-11
ref|XP_002264112.2| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    72   8e-11
emb|CAN64544.1| hypothetical protein VITISV_033383 [Vitis vinifera]    72   8e-11
gb|ADL36830.1| TCP domain class transcription factor [Malus x do...    70   4e-10
ref|XP_002529010.1| transcription factor, putative [Ricinus comm...    68   2e-09

>ref|NP_001234831.1| TCP transcription factor 11 [Solanum lycopersicum]
           gi|306416833|gb|ADM87260.1| TCP transcription factor 11
           [Solanum lycopersicum]
          Length = 523

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 48/93 (51%), Positives = 58/93 (62%)
 Frame = -3

Query: 541 FPSGGGHYTRLGGFGSMLMQQPSPSSHQHLGLGTSETNLGMLATMNAYNRSGLSMNSXXX 362
           F SG G+  +LG   SMLMQQ  PS  QHLGLG +ETNLGMLA +NAY+R GL+MNS   
Sbjct: 440 FQSGRGNPLQLG---SMLMQQQQPS--QHLGLGMAETNLGMLAALNAYSRGGLNMNSDHQ 494

Query: 361 XXXXXXXXXQEGGSHLSQPTNDDSEDESPNNSQ 263
                    Q+      QPT  DS+++ PNNSQ
Sbjct: 495 QSHSLDHHQQQ--QQQQQPT--DSDEDDPNNSQ 523


>ref|XP_002264112.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor TCP8-like
           [Vitis vinifera]
          Length = 538

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 44/79 (55%), Positives = 48/79 (60%)
 Frame = -3

Query: 499 GSMLMQQPSPSSHQHLGLGTSETNLGMLATMNAYNRSGLSMNSXXXXXXXXXXXXQEGGS 320
           GSMLMQQ  PS  QHLGLG SETNLGMLA +NAY+R GL+MNS                 
Sbjct: 469 GSMLMQQ-HPS--QHLGLGVSETNLGMLAALNAYSRGGLNMNSEQNHPMEHHQ------Q 519

Query: 319 HLSQPTNDDSEDESPNNSQ 263
           H  QP   DS DE PN+SQ
Sbjct: 520 HPHQPQGTDSGDEDPNSSQ 538


>emb|CAN64544.1| hypothetical protein VITISV_033383 [Vitis vinifera]
          Length = 550

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 44/79 (55%), Positives = 48/79 (60%)
 Frame = -3

Query: 499 GSMLMQQPSPSSHQHLGLGTSETNLGMLATMNAYNRSGLSMNSXXXXXXXXXXXXQEGGS 320
           GSMLMQQ  PS  QHLGLG SETNLGMLA +NAY+R GL+MNS                 
Sbjct: 481 GSMLMQQ-HPS--QHLGLGVSETNLGMLAALNAYSRGGLNMNSEQNHPMEHHQ------Q 531

Query: 319 HLSQPTNDDSEDESPNNSQ 263
           H  QP   DS DE PN+SQ
Sbjct: 532 HPHQPQGTDSGDEDPNSSQ 550


>gb|ADL36830.1| TCP domain class transcription factor [Malus x domestica]
          Length = 388

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 45/82 (54%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
 Frame = -3

Query: 499 GSMLMQQPSPSSHQHLGLGTSETNLGMLATMNAYNRSGLSMNS---XXXXXXXXXXXXQE 329
           GSMLMQQP PS  QHLGLG S++NLGMLA +NAY+R GL+MNS               QE
Sbjct: 312 GSMLMQQP-PS--QHLGLGVSDSNLGMLAALNAYSRGGLNMNSDQHQHNHHHPLDHHHQE 368

Query: 328 GGSHLSQPTNDDSEDESPNNSQ 263
              H  QP   DS DE+PN+SQ
Sbjct: 369 QQQH--QPQTTDSGDEAPNSSQ 388


>ref|XP_002529010.1| transcription factor, putative [Ricinus communis]
           gi|223531550|gb|EEF33380.1| transcription factor,
           putative [Ricinus communis]
          Length = 546

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 46/90 (51%), Positives = 51/90 (56%)
 Frame = -3

Query: 532 GGGHYTRLGGFGSMLMQQPSPSSHQHLGLGTSETNLGMLATMNAYNRSGLSMNSXXXXXX 353
           GGG    L   GSMLMQQ  PS  QHLGL  SETNLGMLA +NAY+R GL+MNS      
Sbjct: 468 GGGRGNALQ-LGSMLMQQ-QPS--QHLGLSMSETNLGMLAALNAYSRGGLNMNS------ 517

Query: 352 XXXXXXQEGGSHLSQPTNDDSEDESPNNSQ 263
                  E      QP   +S DE PN+SQ
Sbjct: 518 -DQNNPLEQHHQHQQPQTTNSGDEDPNSSQ 546


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