BLASTX nr result

ID: Coptis24_contig00021752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021752
         (1111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    96   1e-17
emb|CBI32919.3| unnamed protein product [Vitis vinifera]               95   4e-17
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    90   9e-16
gb|EAY77591.1| hypothetical protein OsI_32630 [Oryza sativa Indi...    87   7e-15
emb|CAB10188.1| hypothetical protein [Arabidopsis thaliana] gi|7...    87   7e-15

>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 82/263 (31%), Positives = 127/263 (48%), Gaps = 31/263 (11%)
 Frame = +2

Query: 173 LSHLPEPLINHILNFLDMKQIVQTCLLSKRWQNLWESIPNLYFNDLKWYLTQTGPGRKFK 352
           ++ LP+ L+ HIL+FL+ K  V+T +LS++W++LW+S+ NL F+   +         K K
Sbjct: 40  INDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEFHQCYF---------KAK 90

Query: 353 KNKFRYFVDSVLLLRDGSDIQKFTLYFSSSCVSDNKRLDRWISYALRRNVQVLTF----- 517
           +  F   V+ VLLLRD S+I+KFTL   S  + D  R   W+S A+ RNV+ L       
Sbjct: 91  RKIFMNSVERVLLLRDSSNIEKFTL---SCGIDDATRTRTWVSAAVNRNVKELCVNFYEG 147

Query: 518 GATEFFHT------------------NVIRLSGYV-----RTLEFKGVFFPCDDGSDDGV 628
           G +E F +                   V+RLS  +     + L  + V FP D+ S   +
Sbjct: 148 GESESFVSPLCLFTCATLTKLKITSHGVLRLSSSISLPCLKILSLQHVVFP-DEDSTQQI 206

Query: 629 LNMDLVNVEHLLFEDCGYCNVKKLVVNAPALKSLMI---DTYDKRLNHSTVVKICCPKMV 799
           LN  L  +E L      + N+K + ++AP L+SL I      D R + +  V I    + 
Sbjct: 207 LN--LRTLEKLKISYYDWKNLKAITISAPKLRSLDICEMHRNDLRGSDACHVMIFGTALT 264

Query: 800 VILCKGYMFKDYTLENCGNVVIA 868
                G  + DY L    ++V A
Sbjct: 265 FFSFSGGFWDDYCLFKSSSLVEA 287


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 94.7 bits (234), Expect = 4e-17
 Identities = 91/289 (31%), Positives = 136/289 (47%)
 Frame = +2

Query: 164  QDILSHLPEPLINHILNFLDMKQIVQTCLLSKRWQNLWESIPNLYFNDLKWYLTQTGPGR 343
            +D +S+LP+ ++ HI++FL  K  V T +LSKRW+ LW SIPNL F+D          G 
Sbjct: 9    RDRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKPIGD 68

Query: 344  KFKKNKFRYFVDSVLLLRDGSDIQKFTLYFSSSCVSDNKRLDRWISYALRRNVQVLTFGA 523
              +   F+ FVD VLL    S I+KF L  S   +  +  ++ WI  AL RNVQ L    
Sbjct: 69   SERSICFKNFVDKVLLHGSISCIRKFRLKCSDHEL--DSAVNSWICTALERNVQELDL-- 124

Query: 524  TEFFHTNVIRLSGYVRTLEFKGVFFPCDDGSDDGVLNMDLVNVEHLLFEDCGYCNVKKLV 703
              +F T           +E    FF C       VL +  V +E L+ E           
Sbjct: 125  --YFDTEY--------PIELPPKFFFC---KTLVVLKLCPV-LEELVIERWRLDEQWVFN 170

Query: 704  VNAPALKSLMIDTYDKRLNHSTVVKICCPKMVVILCKGYMFKDYTLENCGNVVIAKIDTI 883
            V+AP LKSL I     +L       +  P +  +    ++ +DY + N  ++V A ++  
Sbjct: 171  VSAPTLKSLAIYFSKYKL------VVDAPNLEYLSITDFVSEDYLMSNLSSLVKAYVN-- 222

Query: 884  VNPIEKGLPDIPKMDGEGFGRCLNKLIHGLGNVRCLTLSAHGLQSFSGL 1030
            V P  +G+ D     G      + +L+ G+ NV+ L+LS   L S SG+
Sbjct: 223  VGPTIRGIDDQILYRGR-----IYELLRGISNVKHLSLSGETLHSLSGM 266


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 90.1 bits (222), Expect = 9e-16
 Identities = 88/318 (27%), Positives = 139/318 (43%), Gaps = 30/318 (9%)
 Frame = +2

Query: 164  QDILSHLPEPLINHILNFLDMKQIVQTCLLSKRWQNLWESIPNLYFNDLKWYLTQTGPGR 343
            +DI+S+LP+ L+ HIL+FL  K  V T +LSKRW+ LW S+P L F+D  W    T    
Sbjct: 9    RDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVEL 68

Query: 344  KFKKNKFRYFVDSVLLLRDGSDIQKFTLYFSSSCVSDNKRLDRWISYALRRNVQVLTFGA 523
            + +   F+ FVD VL   + S I+KF L +  + +     +  WI  AL R VQ L    
Sbjct: 69   EERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDNNLDS---VYSWICIALERRVQELDLHL 125

Query: 524  TEFFHTNVIRLSGYVRTL--------------------EFKGVFFPCDDGSDDGVLNMDL 643
               +   +  +    +TL                      K +     + SDD  +   L
Sbjct: 126  LIDWRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLL 185

Query: 644  VN---VEHLLFEDCGYCNVKKLVVNAPALKSLMIDTYDKRLNH-------STVVKICCPK 793
                 +E L+ E     N   + V+ P+LK L I  +     H          V +  P 
Sbjct: 186  SGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPN 245

Query: 794  MVVILCKGYMFKDYTLENCGNVVIAKIDTIVNPIEKGLPDIPKMDGEGFGRCLNKLIHGL 973
            +  +    Y+ KDY +++  ++V A ID  V    +   + P   G  +   + +L+  +
Sbjct: 246  LEYLSITDYLSKDYFVKDLPSLVKAFID--VEQDSEEFEESPHNGGISYHGPIYELLGRI 303

Query: 974  GNVRCLTLSAHGLQSFSG 1027
             NV+CL+L+   L S SG
Sbjct: 304  SNVKCLSLTGVTLDSLSG 321


>gb|EAY77591.1| hypothetical protein OsI_32630 [Oryza sativa Indica Group]
          Length = 454

 Score = 87.0 bits (214), Expect = 7e-15
 Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 14/215 (6%)
 Frame = +2

Query: 137 LKPTTTTNLQDILSHLPEPLINHILNFLDMKQIVQTCLLSKRWQNLWESIPNLYFNDLKW 316
           + P      +D LS LPE +++ +++FLD +Q V+TC+LS+RW+++W ++P ++ +   +
Sbjct: 52  MAPAHAGGREDRLSDLPEGVLHRVMSFLDSRQAVRTCVLSRRWRDVWRTVPRVHADFCDF 111

Query: 317 YLTQTGPGRKFKKNK-------FRYFVDSVLLLRD-GSDIQKFTLYFSSSCVSDNKRLD- 469
            L  T    +  +         F  FV+ +L LRD  + I+ F L F  S   D+   + 
Sbjct: 112 TLNWTSDDDEVDEAAVAEDEVVFNRFVNRLLELRDPNASIRSFFLRFCRSDGGDDGSAEG 171

Query: 470 -RWISYALRRNVQVLTFG----ATEFFHTNVIRLSGYVRTLEFKGVFFPCDDGSDDGVLN 634
            RWISYAL++NV+VL       A E  H+  +  S Y+RT++F  V     +      L 
Sbjct: 172 NRWISYALQKNVRVLEVAVLSHALELDHS--VFSSRYLRTMDFSNVVM---NQGFFKQLE 226

Query: 635 MDLVNVEHLLFEDCGYCNVKKLVVNAPALKSLMID 739
           M    +E L  ++C   + +   +++  LK L +D
Sbjct: 227 MGCPELEELFLDECFIVDDE---ISSQTLKVLTLD 258


>emb|CAB10188.1| hypothetical protein [Arabidopsis thaliana]
            gi|7268114|emb|CAB78451.1| hypothetical protein
            [Arabidopsis thaliana]
          Length = 1047

 Score = 87.0 bits (214), Expect = 7e-15
 Identities = 92/338 (27%), Positives = 144/338 (42%), Gaps = 17/338 (5%)
 Frame = +2

Query: 131  KRLKPTTTTNLQDILSHLPEPLINHILNFLDMKQIVQTCLLSKRWQNLWESIPNLYFNDL 310
            ++LK    +  +DI+S LPE +  HIL+FL  K+   T +LSK+W+ L+  +PNL   DL
Sbjct: 251  RKLKKMDLSGCRDIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNL---DL 307

Query: 311  KWYLTQTGPGRKFKKNKFRYFVDSVLLLRDGSDIQKFTLYFSSSCVSDNKRLDRWISYAL 490
               +           + F  FVD VL L+  S + KF+L        D  R+  WI+  L
Sbjct: 308  DESVYLNPENETEVSSSFMDFVDRVLALQGNSPLHKFSLKIGDGVEPD--RIIPWINNVL 365

Query: 491  RRNVQVL---TFGATEFFHTNVIRLSGYVRTLEFKGVFFPCDDGSDDGVLNMDLVNVEHL 661
             R V  L    +  TEF   + + LS  +  +  K + +P  +  D  +  +  + ++  
Sbjct: 366  ERGVSDLDLHVYMETEFVFPSEMFLSKTL--VRLKLMLYPLLEFEDVYLPKLKTLYIDSC 423

Query: 662  LFEDCGYCNVKKLVVNAPALKSLMID-----TYD---------KRLNHSTVVKICCPKMV 799
             FE  G   + KL+   P L+ L++D     T+D         KRL  ST V+   PK V
Sbjct: 424  YFEKYG-IGLTKLLSGCPILEDLVLDDIPWCTWDFASVSVPTLKRLTFSTQVRDEFPKSV 482

Query: 800  VILCKGYMFKDYTLENCGNVVIAKIDTIVNPIEKGLPDIPKMDGEGFGRCLNKLIHGLGN 979
             I     ++  +T            DT+     KG     + D  G        I  + N
Sbjct: 483  SIDTPNLVYLKFT------------DTVAGKYPKGHQGYGENDMVGNA---TDFIMRICN 527

Query: 980  VRCLTLSAHGLQSFSGLPNMLEPAITCRRLKYLNKLIH 1093
            V+ L LS++ LQ  +          +C  +   N L H
Sbjct: 528  VKTLYLSSNTLQVLT---------YSCDAIPIFNNLTH 556



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 3/204 (1%)
 Frame = +2

Query: 137  LKPTTTTNLQDILSHLPEPLINHILNFLDMKQIVQTCLLSKRWQNLWESIPNLYFNDLKW 316
            LK    +  +D++S LP+ + +HIL+FL  K+   T +LSK+W+ L+  +PNL  +D   
Sbjct: 684  LKRMDLSGSRDVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDD-SV 742

Query: 317  YLTQTGPGRKFKKNKFRYFVDSVLLLRDGSDIQKFTLYFSSSCVSDNKRLDRWISYALRR 496
            YL             F  FVD VL L+                     R+  WI+  L R
Sbjct: 743  YLNPENETE--ISTSFMDFVDRVLALQ--------------------VRIIPWINNVLER 780

Query: 497  NVQVLTFG---ATEFFHTNVIRLSGYVRTLEFKGVFFPCDDGSDDGVLNMDLVNVEHLLF 667
             V  L       +EF   + + L   +  L+ +   +P  D  D  +  +  + +E   F
Sbjct: 781  GVSDLDLHLNLESEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHF 840

Query: 668  EDCGYCNVKKLVVNAPALKSLMID 739
            E+ G   + KL+   P L+ L++D
Sbjct: 841  EEHG-VGLTKLLSGCPMLEDLVLD 863


Top