BLASTX nr result

ID: Coptis24_contig00021745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021745
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP23938.1| one helix protein [Ipomoea nil]                        133   3e-29
ref|XP_002309074.1| HLIP/One helix protein [Populus trichocarpa]...   130   2e-28
ref|XP_002270357.1| PREDICTED: uncharacterized protein LOC100263...   130   2e-28
ref|XP_002531553.1| OHP, putative [Ricinus communis] gi|22352881...   130   3e-28
ref|NP_001143644.1| uncharacterized protein LOC100276366 [Zea ma...   128   1e-27

>gb|AAP23938.1| one helix protein [Ipomoea nil]
          Length = 116

 Score =  133 bits (335), Expect = 3e-29
 Identities = 69/114 (60%), Positives = 79/114 (69%), Gaps = 3/114 (2%)
 Frame = +2

Query: 59  SAISSPSIKTLTVSHPSHHQTFFXXXXXXXXXXXXXXL---RAQAVKLPDGVENPKVEPK 229
           S +SS  +   T   P H+Q FF              +   + QA KLP GVE PK +PK
Sbjct: 3   SPLSSSFLSLSTTHTPQHNQLFFFTNRIHTSTISHKPISSFKLQAAKLPAGVELPKEQPK 62

Query: 230 FTPPFLGFTKTAEVWNSRACMIGLIGTFIVELILNKGILQIIGVDVGKGLDLPL 391
             PPFLGFT+TAE+WNSRACMIGLIGTFIVELILN+GILQ+IGVDVGKGLDLPL
Sbjct: 63  LEPPFLGFTRTAEIWNSRACMIGLIGTFIVELILNRGILQLIGVDVGKGLDLPL 116


>ref|XP_002309074.1| HLIP/One helix protein [Populus trichocarpa]
           gi|222855050|gb|EEE92597.1| HLIP/One helix protein
           [Populus trichocarpa]
          Length = 119

 Score =  130 bits (327), Expect = 2e-28
 Identities = 70/119 (58%), Positives = 82/119 (68%), Gaps = 4/119 (3%)
 Frame = +2

Query: 47  MATLSAISSPSIKTLT---VSHPSHHQ-TFFXXXXXXXXXXXXXXLRAQAVKLPDGVENP 214
           MAT S++ S S   LT     HP + + + F               R QA KLP GVE P
Sbjct: 1   MATPSSLLSSSSLLLTKPVTLHPRNGKVSLFNHRSQIIKTSKEPVFRIQAAKLPPGVELP 60

Query: 215 KVEPKFTPPFLGFTKTAEVWNSRACMIGLIGTFIVELILNKGILQIIGVDVGKGLDLPL 391
           KVEPKF  PFLGFT+TAE+WNSRACM+GLIG F+VELI+NKGILQ+IGVD+GKGLDLPL
Sbjct: 61  KVEPKFQAPFLGFTRTAEIWNSRACMMGLIGVFVVELIINKGILQVIGVDIGKGLDLPL 119


>ref|XP_002270357.1| PREDICTED: uncharacterized protein LOC100263187 [Vitis vinifera]
           gi|297740337|emb|CBI30519.3| unnamed protein product
           [Vitis vinifera]
          Length = 121

 Score =  130 bits (327), Expect = 2e-28
 Identities = 62/73 (84%), Positives = 66/73 (90%)
 Frame = +2

Query: 173 RAQAVKLPDGVENPKVEPKFTPPFLGFTKTAEVWNSRACMIGLIGTFIVELILNKGILQI 352
           R QA KLP GVE PKVEPKF  PFLGFT+TAE+WNSRACMIGLIG FIVELILNKGILQ+
Sbjct: 49  RVQAAKLPPGVELPKVEPKFEAPFLGFTRTAEIWNSRACMIGLIGIFIVELILNKGILQV 108

Query: 353 IGVDVGKGLDLPL 391
           IGVD+GKGLDLPL
Sbjct: 109 IGVDIGKGLDLPL 121


>ref|XP_002531553.1| OHP, putative [Ricinus communis] gi|223528814|gb|EEF30819.1| OHP,
           putative [Ricinus communis]
          Length = 115

 Score =  130 bits (326), Expect = 3e-28
 Identities = 62/74 (83%), Positives = 67/74 (90%)
 Frame = +2

Query: 170 LRAQAVKLPDGVENPKVEPKFTPPFLGFTKTAEVWNSRACMIGLIGTFIVELILNKGILQ 349
           L  +A KLP GVE PKV+PKF  PFLGFT+TAE+WNSRACMIGLIGTFIVELILNKGILQ
Sbjct: 42  LTVRAAKLPPGVELPKVQPKFVAPFLGFTRTAEIWNSRACMIGLIGTFIVELILNKGILQ 101

Query: 350 IIGVDVGKGLDLPL 391
           +IGVDVGKGLDLPL
Sbjct: 102 VIGVDVGKGLDLPL 115


>ref|NP_001143644.1| uncharacterized protein LOC100276366 [Zea mays]
           gi|195623824|gb|ACG33742.1| hypothetical protein [Zea
           mays] gi|414883524|tpg|DAA59538.1| TPA: hypothetical
           protein ZEAMMB73_111021 [Zea mays]
          Length = 115

 Score =  128 bits (321), Expect = 1e-27
 Identities = 60/74 (81%), Positives = 69/74 (93%)
 Frame = +2

Query: 170 LRAQAVKLPDGVENPKVEPKFTPPFLGFTKTAEVWNSRACMIGLIGTFIVELILNKGILQ 349
           LRA+A KLP GVE P+V+PK + PFLGFT+TAE+WNSRACMIGLIGTFIVEL+LNKGILQ
Sbjct: 42  LRARAAKLPPGVEAPRVQPKLSEPFLGFTQTAEIWNSRACMIGLIGTFIVELVLNKGILQ 101

Query: 350 IIGVDVGKGLDLPL 391
           +IGV+VGKGLDLPL
Sbjct: 102 MIGVEVGKGLDLPL 115


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