BLASTX nr result

ID: Coptis24_contig00021740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021740
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26785.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_002281644.1| PREDICTED: uncharacterized protein LOC100252...    61   1e-07
emb|CAN65462.1| hypothetical protein VITISV_002198 [Vitis vinifera]    59   5e-07
ref|XP_003524142.1| PREDICTED: uncharacterized protein LOC100809...    57   2e-06
ref|XP_002527549.1| conserved hypothetical protein [Ricinus comm...    55   4e-06

>emb|CBI26785.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/45 (66%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
 Frame = +2

Query: 2   SLLSIEGKSADFAKRAIPSVHRQRVL-TFTKSRPKKAMLTDGQNV 133
           SLL ++GKSADFAK AIPS+ +QR+L TFTKS+PKK M +DGQ +
Sbjct: 461 SLLVMQGKSADFAKHAIPSLRKQRILVTFTKSQPKKTMASDGQRL 505


>ref|XP_002281644.1| PREDICTED: uncharacterized protein LOC100252594 [Vitis vinifera]
          Length = 698

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/45 (66%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
 Frame = +2

Query: 2   SLLSIEGKSADFAKRAIPSVHRQRVL-TFTKSRPKKAMLTDGQNV 133
           SLL ++GKSADFAK AIPS+ +QR+L TFTKS+PKK M +DGQ +
Sbjct: 454 SLLVMQGKSADFAKHAIPSLRKQRILVTFTKSQPKKTMASDGQRL 498


>emb|CAN65462.1| hypothetical protein VITISV_002198 [Vitis vinifera]
          Length = 1145

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
 Frame = +2

Query: 2   SLLSIEGKSADFAKRAIPSVHRQRVL-TFTKSRPKKAMLTDGQNV 133
           SLL ++GKSADFAK AIPS+ +QR+L TFTKS+PKK   +DGQ +
Sbjct: 467 SLLVMQGKSADFAKHAIPSLRKQRILVTFTKSQPKKTTASDGQRL 511


>ref|XP_003524142.1| PREDICTED: uncharacterized protein LOC100809865 [Glycine max]
          Length = 681

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/45 (60%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
 Frame = +2

Query: 2   SLLSIEGKSADFAKRAIPSVHRQRVL-TFTKSRPKKAMLTDGQNV 133
           SLL +EGKS+DFAK A+PSV +QR+L TFTKS+P+K++ +D Q +
Sbjct: 451 SLLVMEGKSSDFAKHALPSVRKQRILVTFTKSQPRKSLSSDAQRL 495


>ref|XP_002527549.1| conserved hypothetical protein [Ricinus communis]
           gi|223533099|gb|EEF34858.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 697

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 27/45 (60%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
 Frame = +2

Query: 2   SLLSIEGKSADFAKRAIPSVHRQRV-LTFTKSRPKKAMLTDGQNV 133
           SLL ++GK+ DFAK AIP++ +QRV LTFTKS+PKK + +DGQ +
Sbjct: 460 SLLVMQGKATDFAKHAIPAIRKQRVLLTFTKSQPKKFVQSDGQRL 504


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