BLASTX nr result

ID: Coptis24_contig00021739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021739
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77496.1| hypothetical protein VITISV_025266 [Vitis vinifera]    66   3e-09
ref|XP_002526659.1| transcription factor, putative [Ricinus comm...    65   4e-09
ref|XP_003552270.1| PREDICTED: nodulation-signaling pathway 2 pr...    63   2e-08
ref|XP_002267556.2| PREDICTED: uncharacterized protein LOC100267...    62   4e-08
ref|XP_003530301.1| PREDICTED: nodulation-signaling pathway 2 pr...    61   1e-07

>emb|CAN77496.1| hypothetical protein VITISV_025266 [Vitis vinifera]
          Length = 535

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/75 (41%), Positives = 38/75 (50%)
 Frame = +2

Query: 8   CDSPQWNFEDTKRRLYTHAQSLGLKLRXXXXXXXXXXXXXXXXXXXNLKREWLVFNCTVG 187
           C + QW FE+TKR LY HA+S+GLKL+                     + EWL FNC +G
Sbjct: 305 CAASQWRFEETKRHLYNHARSVGLKLKVEEMELQGLMNEIKRTKKKGGRNEWLAFNCMMG 364

Query: 188 LPHMSRVRSRRVVTE 232
           LPHM     RR   E
Sbjct: 365 LPHMGSTGRRRQAME 379


>ref|XP_002526659.1| transcription factor, putative [Ricinus communis]
           gi|223533959|gb|EEF35681.1| transcription factor,
           putative [Ricinus communis]
          Length = 509

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
 Frame = +2

Query: 5   DCDSP--QWNFEDTKRRLYTHAQSLGLKLRXXXXXXXXXXXXXXXXXXXNLKREWLVFNC 178
           +CD     W+F + KRRL  HA+  GLKL+                     ++EWL FNC
Sbjct: 273 NCDEAPLMWSFSEAKRRLVDHARPFGLKLKVEEMGIEDLVSEIKRTKKRGGRKEWLAFNC 332

Query: 179 TVGLPHMSRVRSRRVVTE 232
            VGLPHM RVRSR++V +
Sbjct: 333 MVGLPHMGRVRSRKLVED 350


>ref|XP_003552270.1| PREDICTED: nodulation-signaling pathway 2 protein-like [Glycine
           max]
          Length = 497

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/72 (43%), Positives = 41/72 (56%)
 Frame = +2

Query: 5   DCDSPQWNFEDTKRRLYTHAQSLGLKLRXXXXXXXXXXXXXXXXXXXNLKREWLVFNCTV 184
           +C S   NFE+T+R+LY HA+S GLKL+                     K E+L FNCT+
Sbjct: 268 ECVSSPCNFEETRRQLYEHAKSCGLKLKVEEKGVEELVSDIKKMNKKGEKGEFLAFNCTI 327

Query: 185 GLPHMSRVRSRR 220
            LPHM +VRSR+
Sbjct: 328 DLPHMGKVRSRK 339


>ref|XP_002267556.2| PREDICTED: uncharacterized protein LOC100267833 [Vitis vinifera]
          Length = 1435

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/75 (40%), Positives = 37/75 (49%)
 Frame = +2

Query: 8   CDSPQWNFEDTKRRLYTHAQSLGLKLRXXXXXXXXXXXXXXXXXXXNLKREWLVFNCTVG 187
           C + QW FE+TKR LY HA+S+GLKL+                     + EWL FNC +G
Sbjct: 440 CAASQWRFEETKRHLYNHARSVGLKLKVEEMELQGLMNEIKRTKKKGGRSEWLAFNCMMG 499

Query: 188 LPHMSRVRSRRVVTE 232
           L HM     RR   E
Sbjct: 500 LSHMGSTGRRRQAME 514


>ref|XP_003530301.1| PREDICTED: nodulation-signaling pathway 2 protein-like [Glycine
           max]
          Length = 558

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/72 (40%), Positives = 41/72 (56%)
 Frame = +2

Query: 5   DCDSPQWNFEDTKRRLYTHAQSLGLKLRXXXXXXXXXXXXXXXXXXXNLKREWLVFNCTV 184
           +C S   NF++T+R+LY HA+S GLKL+                     +RE+L FNC +
Sbjct: 329 ECVSSPCNFDETRRQLYEHAKSCGLKLKVEEKGVEELVTEIKKMNKKGGRREFLAFNCMI 388

Query: 185 GLPHMSRVRSRR 220
            LPHM +VRSR+
Sbjct: 389 DLPHMGKVRSRK 400


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