BLASTX nr result

ID: Coptis24_contig00021729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021729
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281060.1| PREDICTED: uncharacterized protein LOC100242...   108   6e-22
emb|CAN78722.1| hypothetical protein VITISV_020005 [Vitis vinifera]   108   6e-22
ref|XP_002524389.1| protein binding protein, putative [Ricinus c...   107   1e-21
ref|XP_003516862.1| PREDICTED: uncharacterized protein LOC100782...   104   6e-21
ref|XP_002315966.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20

>ref|XP_002281060.1| PREDICTED: uncharacterized protein LOC100242198 [Vitis vinifera]
          Length = 616

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/103 (54%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
 Frame = -3

Query: 308 MQSQYIHPPSMSTSLPSARSMPVTDPGSHTAQTGVLGSTFPGGLPLYQPXXXXXXXXXSP 129
           +QS Y  P + S SLPS  S P+ D  SH AQ G+ GSTF GGLPLYQP         +P
Sbjct: 105 IQSHYPRPATTSASLPSTVSGPLPDLSSHNAQLGLPGSTFQGGLPLYQPGGNLGSWGPAP 164

Query: 128 RP-NANASGLDVPMYWQEFYPPSTGLSHVHQQSLLQPSPGLPM 3
            P  AN SGL +PMYWQ +Y P  GL H+HQQSLL+P P L M
Sbjct: 165 PPPTANGSGLTMPMYWQGYYGPPNGLPHLHQQSLLRPPPVLSM 207


>emb|CAN78722.1| hypothetical protein VITISV_020005 [Vitis vinifera]
          Length = 665

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/103 (54%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
 Frame = -3

Query: 308 MQSQYIHPPSMSTSLPSARSMPVTDPGSHTAQTGVLGSTFPGGLPLYQPXXXXXXXXXSP 129
           +QS Y  P + S SLPS  S P+ D  SH AQ G+ GSTF GGLPLYQP         +P
Sbjct: 121 IQSHYPRPATTSASLPSTVSGPLPDLSSHNAQLGLPGSTFQGGLPLYQPGGNLGSWGPAP 180

Query: 128 RP-NANASGLDVPMYWQEFYPPSTGLSHVHQQSLLQPSPGLPM 3
            P  AN SGL +PMYWQ +Y P  GL H+HQQSLL+P P L M
Sbjct: 181 PPPTANGSGLTMPMYWQGYYGPPNGLPHLHQQSLLRPPPVLSM 223


>ref|XP_002524389.1| protein binding protein, putative [Ricinus communis]
           gi|223536350|gb|EEF38000.1| protein binding protein,
           putative [Ricinus communis]
          Length = 665

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/103 (53%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
 Frame = -3

Query: 308 MQSQYIHPPSMSTSLPSARSMPVTDPGSHTAQTGVLGSTFPGGLPLYQPXXXXXXXXXSP 129
           +QS Y  P + S SLP A S  ++D G H AQ G+ GS F GGLPLYQP         SP
Sbjct: 114 IQSHYPRPVATSASLPPAVSGSLSDIGPHNAQIGLTGSNFQGGLPLYQPGGNIGTWGASP 173

Query: 128 RP-NANASGLDVPMYWQEFYPPSTGLSHVHQQSLLQPSPGLPM 3
            P +AN +GL +PMYWQ +Y P  GL H+HQQSLL+P PGL M
Sbjct: 174 PPPSANGNGLAMPMYWQGYYAPPNGLPHLHQQSLLRPPPGLSM 216


>ref|XP_003516862.1| PREDICTED: uncharacterized protein LOC100782890 [Glycine max]
          Length = 610

 Score =  104 bits (260), Expect = 6e-21
 Identities = 57/104 (54%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
 Frame = -3

Query: 308 MQSQYIHPPSMSTSLPSARSMPVTDPGSHTAQTGVLGSTFPGGLPLYQP-XXXXXXXXXS 132
           +QS Y HP S STSLPSA S  +TDP SHT Q G+ G+ F G LPLYQP           
Sbjct: 106 IQSHYPHPVSTSTSLPSAVSGSLTDPSSHTTQLGLPGANFQGPLPLYQPGGNIGSWGASP 165

Query: 131 PRPNANASGLDV-PMYWQEFYPPSTGLSHVHQQSLLQPSPGLPM 3
           P PNAN   L + PMYWQ +Y    GL  +HQQSLLQP PGL M
Sbjct: 166 PAPNANGGRLAMPPMYWQGYYGAPNGLPQLHQQSLLQPPPGLSM 209


>ref|XP_002315966.1| predicted protein [Populus trichocarpa] gi|222865006|gb|EEF02137.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score =  103 bits (257), Expect = 1e-20
 Identities = 55/103 (53%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
 Frame = -3

Query: 308 MQSQYIHPPSMSTSLPSARSMPVTDPGSHTAQTGVLGSTFPGGLPLYQPXXXXXXXXXSP 129
           +QS Y  P + ST  PSA S  +TD GSH    G     F GG+PLYQP         SP
Sbjct: 113 IQSHYPRPFATSTGFPSAVSGSLTDLGSHNGPGGQPAMNFQGGMPLYQPGGSLGTWGASP 172

Query: 128 RP-NANASGLDVPMYWQEFYPPSTGLSHVHQQSLLQPSPGLPM 3
            P NAN SGL +PMYWQ FY P  GL H+HQQSLL+P PGL M
Sbjct: 173 PPPNANGSGLAMPMYWQGFYAPPNGLPHLHQQSLLRPPPGLAM 215


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