BLASTX nr result

ID: Coptis24_contig00021726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021726
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310176.1| predicted protein [Populus trichocarpa] gi|2...   214   3e-53
ref|XP_002522374.1| hypothetical protein RCOM_0603630 [Ricinus c...   207   3e-51
ref|XP_003548909.1| PREDICTED: uncharacterized protein LOC100818...   182   2e-43
ref|XP_002877744.1| hypothetical protein ARALYDRAFT_485391 [Arab...   180   6e-43
ref|NP_190607.2| uncharacterized protein [Arabidopsis thaliana] ...   177   4e-42

>ref|XP_002310176.1| predicted protein [Populus trichocarpa] gi|222853079|gb|EEE90626.1|
            predicted protein [Populus trichocarpa]
          Length = 868

 Score =  214 bits (546), Expect = 3e-53
 Identities = 144/435 (33%), Positives = 225/435 (51%), Gaps = 23/435 (5%)
 Frame = -2

Query: 1245 NVSLLNN---SSCICFEQVSISDVKFRFSPWSFPAFTLEFSGVYVKLRANKVI------- 1096
            +VS LNN   SS   F++V++  + FRFS WS PA  +   GV + L A +V        
Sbjct: 44   DVSALNNESESSRFQFKEVTVDHLSFRFSNWSSPACKIGIRGVNITLLAGEVKEEGSLRR 103

Query: 1095 --KKSEKRKEILSVLDPEGVLLHDAIEKIITNSITSARSWVMTSXXXXXXXXXXXLIHDV 922
              K SE++K+ ++  DPEG  LH+ +E+I+ N    +R+W  TS            I D 
Sbjct: 104  ARKLSEEKKKAVAGFDPEGSALHNVLERILLNP--PSRNWFKTSLLNLLLKHCHLQISDT 161

Query: 921  NLELQLHD--DDVSSSLKIKELSLNAV-DECSCLLKGFVGAVLMPRRFCSLDFSVRGLEI 751
            NL++Q  D  D V   L++K+ +  +   +  CLL+G VGAV  P +  S     RG   
Sbjct: 162  NLQVQFPDLNDAVVFLLELKDFNGESEHSDPGCLLRGVVGAVFKPLKVVSFVMDFRGFGF 221

Query: 750  GLRKEEYANRVLYLEEISTXXXXXXXXXXXXXXXVPQFDIAFCPSDLQIVIAFDILIAKE 571
              + E+  N +    ++ +               VP+  + F P DL ++ AF  L  KE
Sbjct: 222  AYKMEDQINHISSFTDLLSCIKLNDLRVADFNIRVPKLSLLFSPLDLLVLSAFGKLSTKE 281

Query: 570  AKHVRNGRELWNIAANRVDSLTMAAKLSLRKLVGIARIWLRYVHTYESLLSLLGYPGETM 391
             KHVR+GR+LW +AANR+  +  + +LSL KLV    +WLRY + YE LLSLLGY  + +
Sbjct: 282  RKHVRSGRQLWKLAANRLGYVPSSPRLSLHKLVDFICLWLRYQNAYEYLLSLLGYSADNL 341

Query: 390  FEKSSSRMSMNKKLSNDVRNHWKVVSEIEKDMPVEVLARGRRVARERASFQSSTPSSTQR 211
             +KS  ++S +K   N V+++W  +S IEK++P E +A+ RR+AR RA        ++ +
Sbjct: 342  LKKSVIKLSEDKMFLNSVKHNWGEISGIEKELPAEAIAQARRIARYRAVSNIQNGKNSFK 401

Query: 210  HVKFDK--FIFSKILSYIARTFCFIYHSVIQFLVVWASL---NRHEEVDGISRVVSEDY- 49
                DK   +FSKILS     +  +Y  ++  L  +  +    +  ++D      SEDY 
Sbjct: 402  ESSMDKQVNVFSKILSVFIVIWNVMYKILLSILHCFFFIILFFQRPKLDWNPGNNSEDYS 461

Query: 48   --FHCCVNFRKVFIT 10
              +   +NF K+ +T
Sbjct: 462  SRYCFLLNFGKILVT 476


>ref|XP_002522374.1| hypothetical protein RCOM_0603630 [Ricinus communis]
            gi|223538452|gb|EEF40058.1| hypothetical protein
            RCOM_0603630 [Ricinus communis]
          Length = 1720

 Score =  207 bits (528), Expect = 3e-51
 Identities = 141/435 (32%), Positives = 224/435 (51%), Gaps = 26/435 (5%)
 Frame = -2

Query: 1236 LLNNSSCICFEQVSISDVKFRFSPWSFPAFTLEFSGVYVKL------------RANKVIK 1093
            LL+++S   F  V+I ++  RFS WS PAF +E  GV V L            RA K  +
Sbjct: 51   LLDDASLFSFGGVTIEELTLRFSNWSVPAFNIEVRGVNVILVAREEEEERSSVRARKSSE 110

Query: 1092 K-SEKRKEILSVLDPEGVLLHDAIEKIITNSITSARSWVMTSXXXXXXXXXXXLIHDVNL 916
            K +E++K+ ++  DPEG  LHD +EKI+ +  T +R    TS            + D  L
Sbjct: 111  KVNEEKKKAVAGFDPEGGALHDVLEKILIS--TPSRKGFTTSLLNLILKHCHLQVFDTKL 168

Query: 915  ELQLH--DDDVSSSLKIKELSLNA-VDECSCLLKGFVGAVLMPRRFCSLDFSVRGLEIGL 745
            ++Q+   +DD+   L++KE +  +   E  CLL+GF+G    P +  S+  + +GL IG 
Sbjct: 169  QVQVPILNDDLVCLLELKEFNGESEYFEHGCLLRGFLGVAFNPPKETSIVMNFKGLGIGY 228

Query: 744  RKEEYANRVLYLEEISTXXXXXXXXXXXXXXXVPQFDIAFCPSDLQIVIAFDILIAKEAK 565
               +  N V+   ++ +               VP  ++   P DL ++     L  KE K
Sbjct: 229  WMNDKENSVVSSTDLFSCIRLNDLQLADISIRVPGLNLLLSPLDLLVLSVLGRLPLKEPK 288

Query: 564  HVRNGRELWNIAANRVDSLTMAAKLSLRKLVGIARIWLRYVHTYESLLSLLGYPGETMFE 385
            HVRNGR+LW +AANR+  +T   +LSL  L     +WLRY++ YE LLS +GY    + +
Sbjct: 289  HVRNGRQLWRLAANRLGYVTSFPRLSLHNLADFVCMWLRYLNAYEHLLSFIGYTQVNLLK 348

Query: 384  KSSSRMSMNKKLSNDVRNHWKVVSEIEKDMPVEVLARGRRVARERA--SFQSSTPSSTQR 211
            + S  M  +K   + V+ HW+++S  EK++P E +A+ RR+AR +A  S      S  + 
Sbjct: 349  RPSIGMLRDKMFHSSVKQHWELISRTEKELPPEAIAQARRIARYKATLSIPQGEDSYKEY 408

Query: 210  HVKFDKFIFSKILSYIARTFCFIYHSVIQFLVVWASL---NRHEEVDGISRVVSEDYFHC 40
             V+    +FSK+LS +  T+  I+  V+  +  + S+    +  + DG   ++SED  HC
Sbjct: 409  SVRSQFQVFSKVLSLLVFTWNVIHRVVLSNIHAFLSIVFSRQEPKFDGHLGIISED--HC 466

Query: 39   -----CVNFRKVFIT 10
                  +NF KV IT
Sbjct: 467  PQYCFLLNFGKVLIT 481


>ref|XP_003548909.1| PREDICTED: uncharacterized protein LOC100818143 [Glycine max]
          Length = 3602

 Score =  182 bits (461), Expect = 2e-43
 Identities = 125/435 (28%), Positives = 221/435 (50%), Gaps = 24/435 (5%)
 Frame = -2

Query: 1236 LLNNSSCICFEQVSISDVKFRFSPWSFPAFTLEFSGVYV--------------KLRANKV 1099
            L ++ + + F+ +S+  +  RFS W  PAFT+E  GV +              +LR +K 
Sbjct: 51   LFHSPAFLFFKDLSVERLTLRFSTWFPPAFTVELHGVRIVQSFEKPEAEECAARLRNSKY 110

Query: 1098 IKKSEKRKEILSVLDPEGVLLHDAIEKIITNSITSARSWVMTSXXXXXXXXXXXLIHDVN 919
              +   RK  LS LDPEG  LHD +E+I+  +    +    TS           + H ++
Sbjct: 111  DCEDYLRKN-LSALDPEGCSLHDILERILFAA--PEKKDFTTSFWNLILKNCHLVAHCIH 167

Query: 918  LELQLH--DDDVSSSLKIKELSLNA--VDECSCLLKGFVGAVLMPRRFCSLDFSVRGLEI 751
            +E+QL   +D+     +IKELS+ +  VD+  CLL+GF+ +V +P +  +L     G   
Sbjct: 168  VEIQLPVLNDEFMCFGEIKELSVRSKYVDK-KCLLRGFLSSVFIPMKDSTLVLKGVGFRA 226

Query: 750  GLRKEEYANRVLYLEEISTXXXXXXXXXXXXXXXVPQFDIAFCPSDLQIVIAFDILIAKE 571
             L  +++   VL   ++                  P+   +F P  + + + F  L++  
Sbjct: 227  RLVGKDHTGNVLLSSDMQIDIKFRDLKLASCTLCFPELVFSFSPDGISVCLLFLKLVSNN 286

Query: 570  AKHVRNGRELWNIAANRVDSLTMAAKLSLRKLVGIARIWLRYVHTYESLLSLLGYPGETM 391
                R  RELW IAA+R+  +T+  +LS  +LVG+   W+ Y + YE++L L+GY     
Sbjct: 287  YNQSRGARELWRIAASRIGHVTVTPRLSFHRLVGVIGQWIHYANAYENILLLIGYSTSHT 346

Query: 390  FEKSSSRMSMNKKLSNDVRNHWKVVSEIEKDMPVEVLARGRRVARERASFQSSTPSSTQR 211
            ++KS S+++ NK + +    HWK++S+IEK +PVE ++  RR+AR RA+ + S  +  + 
Sbjct: 347  WKKSISKLTRNKLILSSASRHWKLISDIEKKLPVEGISLARRIARHRAALKDSI-NCHED 405

Query: 210  HVKFDKFI--FSKILSYIARTFCFIYHSVIQFLVVWASLNRHEEVDG--ISRVVSEDYFH 43
             V  +KF   F  +LS++ +    I H ++  +     + +  ++DG  +  ++ +    
Sbjct: 406  FVTTNKFFRPFIFLLSFMWKLISTIIHCLVN-IFSREKIVQDPDIDGCCLESLIEDPCQS 464

Query: 42   CC--VNFRKVFITVN 4
            CC  +NF K+ ITV+
Sbjct: 465  CCFVLNFGKIIITVS 479


>ref|XP_002877744.1| hypothetical protein ARALYDRAFT_485391 [Arabidopsis lyrata subsp.
            lyrata] gi|297323582|gb|EFH54003.1| hypothetical protein
            ARALYDRAFT_485391 [Arabidopsis lyrata subsp. lyrata]
          Length = 3074

 Score =  180 bits (457), Expect = 6e-43
 Identities = 143/446 (32%), Positives = 220/446 (49%), Gaps = 31/446 (6%)
 Frame = -2

Query: 1245 NVSLLN---NSSCICFEQVSISDVKFRFSPWSFPAFTLEFSGVYVKLRANKVIKKSEKRK 1075
            +VS LN   + S   FE+ +I  +  R S WS PA  +E  GV VKL A    + S +RK
Sbjct: 45   DVSQLNQLLDGSNFQFEKFTIDHLVVRLSVWSAPAIKIEIRGVNVKLSARGTEEGSSRRK 104

Query: 1074 ------------EILSVLDPEGVLLHDAIEKIITNSITSARSWVMTSXXXXXXXXXXXLI 931
                        ++LS +DPEG +LHD +EK++  S TS  S + TS            I
Sbjct: 105  RASSDRVANEIKKVLSSIDPEGCVLHDILEKMLGRS-TSQISKLKTSFSNLILRHFRIRI 163

Query: 930  HDVNLELQLH-DDDVSSSLKIKELSLNAVDECSC-LLKGFVGAVLMPRRFCSLDFSVRGL 757
            H +N+++ L    ++S  ++I EL  ++ +  +  L++    AVL P R  SL  S  G 
Sbjct: 164  HGINVQVCLPGSSNLSCVMEINELRSDSENFGNLGLVRSSAAAVLFPLRRSSLTLSCFGF 223

Query: 756  EIGLRKEEYANRVLYLEEISTXXXXXXXXXXXXXXXVPQFDIAFCPSDLQIVIAFDILIA 577
             IG +++     +   + +                 +P+ + +F P+DL +++    L +
Sbjct: 224  NIGYKRDNEIADLCGFDSLVMLITLHNLQLVDLIVRIPELNFSFRPTDLPVLMGLANLSS 283

Query: 576  KEAKHVRNGRELWNIAANRVDSLTMAAKLSLRKLVGIARIWLRYVHTYESLLSLLGYPGE 397
            K++ +VRNGR LW +AA R   +     +S + LV    +WLRYV+ YE LLSL GY   
Sbjct: 284  KDSNYVRNGRYLWKVAARRTGLMISPHTVSFQNLVSAVILWLRYVNAYEYLLSLAGY-SR 342

Query: 396  TMFEKSSS-RMSMNKKLSNDVRNHWKVVSEIEKDMPVEVLARGRRVARERASFQS-STPS 223
            +M EKS   + S NK+     R  W+++  IEK++P E +AR RRVAR R   QS ++  
Sbjct: 343  SMPEKSLLWKFSENKRHFGTARRKWEMICNIEKELPAEAIARARRVARYRTCLQSQNSDE 402

Query: 222  STQRHVKFDKF--------IFSKILSYIARTF----CFIYHSVIQFLVVWASLNRHEEVD 79
            S      +  F        + + I   I+RTF    CF++ +  ++L       R+ E D
Sbjct: 403  SYDESFVYGHFNCLSKTTGVLACIWRLISRTFWSIACFLWSN--KYLTQELQTGRNNEDD 460

Query: 78   GISRVVSEDYFHCCVNFRKVFITVNP 1
              S +VS + FH  VN  KV IT  P
Sbjct: 461  --SELVSLE-FHAVVNLGKVSITFYP 483


>ref|NP_190607.2| uncharacterized protein [Arabidopsis thaliana]
            gi|332645140|gb|AEE78661.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 3072

 Score =  177 bits (450), Expect = 4e-42
 Identities = 138/445 (31%), Positives = 215/445 (48%), Gaps = 30/445 (6%)
 Frame = -2

Query: 1245 NVSLLN---NSSCICFEQVSISDVKFRFSPWSFPAFTLEFSGVYVKLRANKVIKKSEKRK 1075
            +VS LN   + S   FE+ ++  +   FS WS PA   E  GV VKL A    + S +RK
Sbjct: 45   DVSQLNQLFDESNFQFEKFTVDQLVVSFSVWSAPAIKFEIRGVNVKLSARGTDEGSSRRK 104

Query: 1074 ------------EILSVLDPEGVLLHDAIEKIITNSITSARSWVMTSXXXXXXXXXXXLI 931
                        ++LS +DP+G +LHD +EK++  S TS  S + TS            I
Sbjct: 105  RASSDTVANEIKKVLSSIDPKGCVLHDILEKMLGRS-TSQISKLKTSFSNLILRHFRIQI 163

Query: 930  HDVNLELQLH-DDDVSSSLKIKELSLNAVDECSC-LLKGFVGAVLMPRRFCSLDFSVRGL 757
            H +N+++ L    D+S  ++I EL  ++ +  +  L++    AVL P R  S   S  G 
Sbjct: 164  HGINVQVCLPGSSDLSCLMEINELRSDSENFGNLSLVRSSAAAVLFPLRRSSFTLSCFGF 223

Query: 756  EIGLRKEEYANRVLYLEEISTXXXXXXXXXXXXXXXVPQFDIAFCPSDLQIVIAFDILIA 577
             IG +++     +   + +                 VP+   +F P+DL +++    L +
Sbjct: 224  NIGYKRDNEIVDLCGFDSLVMLITLHNLQLVDLVVRVPELSFSFRPTDLPVLMGLANLSS 283

Query: 576  KEAKHVRNGRELWNIAANRVDSLTMAAKLSLRKLVGIARIWLRYVHTYESLLSLLGYPGE 397
            K++ +VRNGR LW +AA R   +     +S + LV +  +WLRYV+ YE LLSL GY  +
Sbjct: 284  KDSNYVRNGRYLWKVAARRTGLMISPHSVSFQNLVSVVILWLRYVNAYEYLLSLAGYSRK 343

Query: 396  TMFEKSSSRMSMNKKLSNDVRNHWKVVSEIEKDMPVEVLARGRRVARERASFQSS----- 232
               +    + S NK+     R  W+++  IEK++P E +AR RRVAR RA   S      
Sbjct: 344  MPEKSLLWKFSENKRHFVTARRKWEMICNIEKELPAEAIARARRVARYRACLNSQDADDD 403

Query: 231  -TPSSTQRHVKF---DKFIFSKILSYIARTF----CFIYHSVIQFLVVWASLNRHEEVDG 76
               SS   H K+     ++ + I   I+RTF    CF++  + + L      +R+ E D 
Sbjct: 404  YDESSLYGHFKYLSKTTWVLAYIWRLISRTFWSIACFLW--LNKLLTQELQTDRNNEDD- 460

Query: 75   ISRVVSEDYFHCCVNFRKVFITVNP 1
             S  VS + FH  VN  K+ +T  P
Sbjct: 461  -SECVSLE-FHAVVNLGKLSVTCYP 483


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