BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021721
         (1101 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]   226   8e-57
emb|CCH50966.1| T4.5 [Malus x robusta]                                217   5e-54
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]                    208   2e-51
gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr...   202   9e-50
emb|CAN66496.1| hypothetical protein VITISV_036886 [Vitis vinifera]   202   1e-49

>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score =  226 bits (576), Expect = 8e-57
 Identities = 123/302 (40%), Positives = 174/302 (57%), Gaps = 2/302 (0%)
 Frame = +1

Query: 196  IDCYDRMNFAFQGKIPPKTLKAMVAHRSNETSTSGYGNTQYSSQHDGQYDPTASSSWYMD 375
            IDC+ R ++++QG+ PP+ L AMVA            N  +  Q            WYMD
Sbjct: 286  IDCFHRFDYSYQGRFPPQDLAAMVAET----------NATFDHQ-----------VWYMD 324

Query: 376  SGATNHMTSDVGNLNYHQPYCGGDQVQVGDGLNLNIANTGKALLKTPTQSTF*LNNILHI 555
            SGA  H+TSD  NL + QP+C  + V VG+G  L + NTG        QS F LN ILH 
Sbjct: 325  SGANAHITSDATNLTHQQPFCESETVTVGNGSGLQVLNTGSTTFNFG-QSNFHLNKILHC 383

Query: 556  PKISQNLLSVHKFTSDNDCTIIFTSSHFFVKDNKTQKIRFQGQTKHGLYPISLSSTGQDS 735
            P+ + NL+S+++F  DN+C  I T++ F VK+N T +I  QG  ++GLYP++   T   S
Sbjct: 384  PQAATNLISINQFCLDNNCYFILTANGFVVKENLTGRILLQGVVENGLYPLAGCKTFHKS 443

Query: 736  -HLHTAFIGERSSSSTWHQRLGHPASSILHKVVHQYDLPL-NTASKHTFCTSCQFGKSSQ 909
                +  IG R+++ TWH RLGHP+S I + + H   L +  +++K  FC++CQ GK+ Q
Sbjct: 444  LTCLSTTIGVRANADTWHSRLGHPSSVIFNSLFHSNKLSVKGSSTKLEFCSACQLGKAKQ 503

Query: 910  LPFVLSTSKCNKPLQLLHVDLWGPSPVLSIKGFKYYASIIDDFSNYCWIFPLCVKSDFCK 1089
            LPF  S+ + + PL L+H D+W  SPV S  G  YY   IDD+S Y W++PL  KSD   
Sbjct: 504  LPFPESSRQSSVPLALIHSDVW-VSPVQSTGGCSYYVLFIDDYSRYSWLYPLHRKSDVFA 562

Query: 1090 VF 1095
             F
Sbjct: 563  TF 564


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  217 bits (552), Expect = 5e-54
 Identities = 113/266 (42%), Positives = 161/266 (60%), Gaps = 4/266 (1%)
 Frame = +1

Query: 295  SGYGNTQYSSQHDGQYDPTASSSWYMDSGATNHMTSDVGNLNYHQPYCGGDQVQVGDGLN 474
            S +  +Q  +         + S W  DSGA++H+T D   LN   PY G DQ+ VGDG  
Sbjct: 568  SQFAQSQSPTAMSAMTSSASPSYWLTDSGASHHVTPDPSALNSAIPYSGNDQLFVGDGKG 627

Query: 475  LNIANTGKALLKTPTQSTF*LNNILHIPKISQNLLSVHKFTSDNDCTIIFTSSHFFVKDN 654
            L I++TG AL++T   +TF LN++L +P+ S NLLSV+KF  DN C + F    F+VKD 
Sbjct: 628  LCISHTGSALIRTK-HATFRLNDVLLVPQASHNLLSVYKFVYDNWCYLTFDPFGFYVKDL 686

Query: 655  KTQKIRFQGQTKHGLYPISLSSTGQDSHLH---TAFIGERSSSSTWHQRLGHPASSILHK 825
             T K+ FQG ++ GLYP   +++   S +    TA +  ++   TWH+RLGHP+   LH 
Sbjct: 687  STGKMLFQGPSEGGLYPFYWNASNGVSGIAISPTALMIAKADIHTWHRRLGHPSGGTLHS 746

Query: 826  VVHQYDLP-LNTASKHTFCTSCQFGKSSQLPFVLSTSKCNKPLQLLHVDLWGPSPVLSIK 1002
            VVH+  LP +   +  + CT+CQ GKS +L F       ++PLQLLH D+WGPSP  S  
Sbjct: 747  VVHKNHLPVIGYVNNMSVCTACQLGKSYRLSFSTLPCTSSRPLQLLHTDVWGPSPTSSCT 806

Query: 1003 GFKYYASIIDDFSNYCWIFPLCVKSD 1080
            G+++Y  I+DDF+ Y W++PL  KSD
Sbjct: 807  GYRFYLIIVDDFTKYSWLYPLHFKSD 832


>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
          Length = 1429

 Score =  208 bits (530), Expect = 2e-51
 Identities = 114/282 (40%), Positives = 169/282 (59%), Gaps = 10/282 (3%)
 Frame = +1

Query: 280  NETSTSGYGNTQYSSQHDGQYDPTAS-------SSWYMDSGATNHMTSDVGNLNYHQPYC 438
            +++  SGY    YS      + P A+       + W +DSGAT+H+TSD+ NL+ HQPY 
Sbjct: 279  SQSVPSGYPTNGYSPSPMAPWQPRANIATAPPFNPWVLDSGATHHLTSDLANLSMHQPYT 338

Query: 439  GGDQVQVGDGLNLNIANTGKALLKTPTQSTF*LNNILHIPKISQNLLSVHKFTSDNDCTI 618
            GG++V + DG  L I++TG ALL TP++S   L +IL++P +S+NL+SV++  + N  ++
Sbjct: 339  GGEEVTIADGSGLPISHTGSALLPTPSRSLA-LKDILYVPNVSKNLISVYRLCNANQVSV 397

Query: 619  IFTSSHFFVKDNKTQKIRFQGQTKHGLY--PISLSSTGQDSHLHTAFIGERSSSSTWHQR 792
             F  +HF VKD  T     QG+T++ LY  P++  S      + TA    ++  S+WHQR
Sbjct: 398  EFFPAHFQVKDLNTGARLLQGRTRNELYEWPVNQKSI----TILTASPSPKTDLSSWHQR 453

Query: 793  LGHPASSILHKVVHQYDLPL-NTASKHTFCTSCQFGKSSQLPFVLSTSKCNKPLQLLHVD 969
            LGHPA  IL  VV  + LPL NT  K   C+ C   KS +LPF  +T   ++PL+ L+ D
Sbjct: 454  LGHPALPILKDVVSHFHLPLSNTIPKQLPCSDCSINKSHKLPFFTNTIVSSQPLEYLYTD 513

Query: 970  LWGPSPVLSIKGFKYYASIIDDFSNYCWIFPLCVKSDFCKVF 1095
            +W  SP +S+  +KYY  I+D F+ Y W++PL  KS    VF
Sbjct: 514  VW-TSPCISVDNYKYYLVIVDHFTRYTWMYPLKQKSQVKDVF 554


>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
            polyprotein from Arabidopsis arenosa [Arabidopsis
            thaliana]
          Length = 1194

 Score =  202 bits (515), Expect = 9e-50
 Identities = 103/251 (41%), Positives = 157/251 (62%), Gaps = 1/251 (0%)
 Frame = +1

Query: 346  PTASSSWYMDSGATNHMTSDVGNLNYHQPYCGGDQVQVGDGLNLNIANTGKALLKTPTQS 525
            P  +++W +DSGAT+H+TSD+ NL+ HQPY GG+ V + DG  L+I++TG AL+ TP++S
Sbjct: 282  PYNANNWLLDSGATHHITSDLNNLSLHQPYTGGEDVTIADGSGLSISHTGSALISTPSRS 341

Query: 526  TF*LNNILHIPKISQNLLSVHKFTSDNDCTIIFTSSHFFVKDNKTQKIRFQGQTKHGLYP 705
               L ++L++P I +NL+SV++  + N  ++ F  +HF VKD KT     QG+TK  LY 
Sbjct: 342  LA-LTDVLYVPNIHKNLISVYRMCNANKVSVEFFPAHFQVKDLKTGVQLLQGRTKDELYE 400

Query: 706  ISLSSTGQDSHLHTAFIGERSSSSTWHQRLGHPASSILHKVVHQYDLPL-NTASKHTFCT 882
              ++     SH  T     ++  ++WH RLGHP+ S L  VV Q+ LP+ N+  K   C+
Sbjct: 401  WPVNPPKPSSHFTTT--TPKTDLTSWHSRLGHPSLSTLKVVVSQFSLPVSNSLQKQFNCS 458

Query: 883  SCQFGKSSQLPFVLSTSKCNKPLQLLHVDLWGPSPVLSIKGFKYYASIIDDFSNYCWIFP 1062
             C   K+ +LPF  +T    +PL+ L++DLW  SP++SI  FKYY  I+D ++ Y W +P
Sbjct: 459  DCLLNKTHKLPFHTNTITSTQPLEYLYIDLW-TSPIVSIDNFKYYLVIVDHYTRYSWFYP 517

Query: 1063 LCVKSDFCKVF 1095
            +  KS    VF
Sbjct: 518  IKQKSHVKDVF 528


>emb|CAN66496.1| hypothetical protein VITISV_036886 [Vitis vinifera]
          Length = 1092

 Score =  202 bits (514), Expect = 1e-49
 Identities = 102/250 (40%), Positives = 150/250 (60%), Gaps = 1/250 (0%)
 Frame = +1

Query: 349  TASSSWYMDSGATNHMTSDVGNLNYHQPYCGGDQVQVGDGLNLNIANTGKALLKTPTQST 528
            + +  W +DS A++++TSD+ +L+ H  Y G D+V +GDG  L IA+ G   L +P++S 
Sbjct: 195  STNGKWLLDSAASHNITSDLASLSIHSEYEGQDEVVLGDGTGLQIAHIGSTTLSSPSRSL 254

Query: 529  F*LNNILHIPKISQNLLSVHKFTSDNDCTIIFTSSHFFVKDNKTQKIRFQGQTKHGLYPI 708
              L   LH+P I +NL+S HKFT DN+ TI F    + VKD  T     +G+ ++G+YP+
Sbjct: 255  M-LKETLHVPLIHKNLISXHKFTHDNNVTIEFHPFFYLVKDRMTGAXLMRGRCENGVYPV 313

Query: 709  SL-SSTGQDSHLHTAFIGERSSSSTWHQRLGHPASSILHKVVHQYDLPLNTASKHTFCTS 885
            +L SS+ Q + +H A  G R +   WH RLGH    IL  ++  +DLP+ ++     C S
Sbjct: 314  ALQSSSPQXNQIHLA--GTRVTFDCWHHRLGHXTPKILSSLLQSHDLPVASSKSTLSCIS 371

Query: 886  CQFGKSSQLPFVLSTSKCNKPLQLLHVDLWGPSPVLSIKGFKYYASIIDDFSNYCWIFPL 1065
            CQ  KS +LPF  ++ K    L+ L+ D+WGPSPV SI G+ YY  ++D F+ YCW  PL
Sbjct: 372  CQCNKSHKLPFSSTSLKNXVXLEFLYDDVWGPSPVSSIDGYHYYLLLVDHFTKYCWFXPL 431

Query: 1066 CVKSDFCKVF 1095
              KSD    F
Sbjct: 432  XHKSDVHSTF 441