BLASTX nr result

ID: Coptis24_contig00021713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021713
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542962.1| PREDICTED: uncharacterized protein LOC100804...    99   3e-19
gb|AFN53716.1| putative DUF584 protein [Linum usitatissimum]           99   4e-19
ref|XP_002317313.1| predicted protein [Populus trichocarpa] gi|2...    98   1e-18
ref|XP_002522299.1| conserved hypothetical protein [Ricinus comm...    96   5e-18
ref|XP_002881332.1| hypothetical protein ARALYDRAFT_482377 [Arab...    93   3e-17

>ref|XP_003542962.1| PREDICTED: uncharacterized protein LOC100804206 [Glycine max]
          Length = 118

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 58/123 (47%), Positives = 77/123 (62%)
 Frame = -3

Query: 478 EEFQESEVLWPDHHDNNIHKRELQTLHTSFERKMSVKKTDSTHSRPIHIPEKSMCSLQSN 299
           EEF ESEV++PDH    +H   ++       ++    +  + +S P+ IPE+     +  
Sbjct: 3   EEFTESEVVFPDHRA--VHDWVVEMAPQPQRKERENCRRTAANSMPVSIPEREG---RRR 57

Query: 298 WLEYDSFXXXXXEKMLPPHEMLARRLNGKMAFSVCTGNGRTLKGRDLSKVRNSILRRTGF 119
           W   +       E+M PPHE++ RR+  KMAFSVCTGNGRTLKGRDLS+VRNSILR TGF
Sbjct: 58  WGSPEE--EAEEEEMTPPHEIVKRRVAAKMAFSVCTGNGRTLKGRDLSQVRNSILRLTGF 115

Query: 118 LEA 110
           LEA
Sbjct: 116 LEA 118


>gb|AFN53716.1| putative DUF584 protein [Linum usitatissimum]
          Length = 114

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 57/129 (44%), Positives = 76/129 (58%), Gaps = 7/129 (5%)
 Frame = -3

Query: 478 EEFQESEVLWP-------DHHDNNIHKRELQTLHTSFERKMSVKKTDSTHSRPIHIPEKS 320
           EE  ES++++P       DH  +N H+              S KK     S P++IP  +
Sbjct: 4   EELHESDIIFPCRETTAPDHQHHNTHR--------------SKKKRKQKSSVPVNIPRNN 49

Query: 319 MCSLQSNWLEYDSFXXXXXEKMLPPHEMLARRLNGKMAFSVCTGNGRTLKGRDLSKVRNS 140
           +     +  EY+       ++++PPH +L RR+ GKMAFSVCTGNGRTLKGRDLS+VRNS
Sbjct: 50  VFRFGDSEEEYED-----SDELVPPHVILGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNS 104

Query: 139 ILRRTGFLE 113
           ILR TGFLE
Sbjct: 105 ILRMTGFLE 113


>ref|XP_002317313.1| predicted protein [Populus trichocarpa] gi|222860378|gb|EEE97925.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 57/124 (45%), Positives = 76/124 (61%), Gaps = 2/124 (1%)
 Frame = -3

Query: 478 EEFQESEVLWPDHHDN--NIHKRELQTLHTSFERKMSVKKTDSTHSRPIHIPEKSMCSLQ 305
           EEFQESEV++ DH          +   + ++  +K+  KK   + S P+ IP +      
Sbjct: 3   EEFQESEVIFSDHEHGCKKYFNYQEMGVFSNNNKKVKKKKQKQSSSVPVSIPNREFQLSD 62

Query: 304 SNWLEYDSFXXXXXEKMLPPHEMLARRLNGKMAFSVCTGNGRTLKGRDLSKVRNSILRRT 125
           S+  E D       + ++PPH ++ RR+ GKMAFSV TGNGRTLKGRDLS+VRNSILR T
Sbjct: 63  SDDFEED----YGGDDLVPPHIIVERRIAGKMAFSVRTGNGRTLKGRDLSEVRNSILRMT 118

Query: 124 GFLE 113
           GFLE
Sbjct: 119 GFLE 122


>ref|XP_002522299.1| conserved hypothetical protein [Ricinus communis]
           gi|223538552|gb|EEF40157.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 121

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 57/125 (45%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
 Frame = -3

Query: 478 EEFQESEVLWPDHHDNNIHKRELQTLHT-SFERKMSVKKTDSTHSR-PIHIPEKSMCSLQ 305
           EEF+ESEV++ + HD +   R  +T +  S  RK   KK   + S  P++IP        
Sbjct: 3   EEFEESEVIFSEEHDKSSLCRNRETEYDDSCSRKGKKKKQKKSRSSGPVNIPSNMFQLTT 62

Query: 304 SNWLEYDSFXXXXXEKMLPPHEMLARRLNGK-MAFSVCTGNGRTLKGRDLSKVRNSILRR 128
               ++D        +++PPH ++ RR+ GK MAFS+C+GNGRTLKGRDLS+VRNSILR 
Sbjct: 63  DTDDQFDD-------ELVPPHVIIGRRIEGKLMAFSLCSGNGRTLKGRDLSQVRNSILRL 115

Query: 127 TGFLE 113
           TGFLE
Sbjct: 116 TGFLE 120


>ref|XP_002881332.1| hypothetical protein ARALYDRAFT_482377 [Arabidopsis lyrata subsp.
           lyrata] gi|297327171|gb|EFH57591.1| hypothetical protein
           ARALYDRAFT_482377 [Arabidopsis lyrata subsp. lyrata]
          Length = 134

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 57/132 (43%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
 Frame = -3

Query: 478 EEFQESEVLWPDHHDNNIHKRELQTLHTS---FERKMSVKKTDS----THSRPIHIPEKS 320
           EEF ESE+++ D   +  HK   + L  S    ++K  +K T +    + S P++IPE  
Sbjct: 3   EEFDESEIVFSDGFSSVHHKENKKRLFGSDMEMKKKRWIKMTTTDKALSSSLPVNIPENM 62

Query: 319 MCS-LQSNWLEYDSFXXXXXEKMLPPHEMLARRLNG-KMAFSVCTGNGRTLKGRDLSKVR 146
               +     +Y         +M+PPH M+ RR+ G +MAFSVC+G+GRTLKGRDLS+VR
Sbjct: 63  FRRYVGKEEDDYSKEEYSDVGEMVPPHIMVGRRIQGGQMAFSVCSGSGRTLKGRDLSRVR 122

Query: 145 NSILRRTGFLEA 110
           NS+LR TGFLEA
Sbjct: 123 NSVLRLTGFLEA 134


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