BLASTX nr result

ID: Coptis24_contig00021707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021707
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271346.1| PREDICTED: uncharacterized protein LOC100258...   164   7e-39
ref|XP_002302858.1| predicted protein [Populus trichocarpa] gi|2...   152   4e-35
ref|XP_002525339.1| conserved hypothetical protein [Ricinus comm...   151   5e-35
ref|XP_003601424.1| hypothetical protein MTR_3g080550 [Medicago ...   146   2e-33
ref|XP_003556841.1| PREDICTED: uncharacterized protein LOC100817...   145   3e-33

>ref|XP_002271346.1| PREDICTED: uncharacterized protein LOC100258570 [Vitis vinifera]
           gi|297739214|emb|CBI28865.3| unnamed protein product
           [Vitis vinifera]
          Length = 565

 Score =  164 bits (415), Expect = 7e-39
 Identities = 75/101 (74%), Positives = 90/101 (89%)
 Frame = -3

Query: 443 KQSSYYDQIMQDSSGSTFEDIVDAYLAYLQVTVVNPAMDSVLFLMQKFAVDARDGKISKD 264
           KQS+YY ++M+DS GSTFEDI+DAYL+YLQ+TVVNPAMD  L L++KFAVDAR G+I +D
Sbjct: 378 KQSNYYQKVMEDS-GSTFEDIIDAYLSYLQITVVNPAMDKALKLLEKFAVDARSGRIPED 436

Query: 263 RLQFGAPWRHPPRTDNPTVCLEWAKIQLMDFVHSLVNAEFG 141
           RL+FGAPWRHPPR DNPT+C EW K+QL+DFV SLVNAEFG
Sbjct: 437 RLRFGAPWRHPPRIDNPTLCSEWTKLQLIDFVQSLVNAEFG 477


>ref|XP_002302858.1| predicted protein [Populus trichocarpa] gi|222844584|gb|EEE82131.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  152 bits (383), Expect = 4e-35
 Identities = 70/102 (68%), Positives = 86/102 (84%)
 Frame = -3

Query: 443 KQSSYYDQIMQDSSGSTFEDIVDAYLAYLQVTVVNPAMDSVLFLMQKFAVDARDGKISKD 264
           KQSSYY ++++D + STFEDIVDAYLAYLQVTVVNPAMD  L  +QKFA DA+ GKI KD
Sbjct: 382 KQSSYYQKVLEDKA-STFEDIVDAYLAYLQVTVVNPAMDKALEFLQKFANDAKSGKIPKD 440

Query: 263 RLQFGAPWRHPPRTDNPTVCLEWAKIQLMDFVHSLVNAEFGV 138
           RL+FG+PW+HP + D+PT C +WAK+QL+DFV SL+N EFGV
Sbjct: 441 RLRFGSPWKHPSKLDDPTQCQQWAKLQLLDFVQSLINTEFGV 482


>ref|XP_002525339.1| conserved hypothetical protein [Ricinus communis]
           gi|223535398|gb|EEF37072.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 569

 Score =  151 bits (382), Expect = 5e-35
 Identities = 69/102 (67%), Positives = 86/102 (84%)
 Frame = -3

Query: 443 KQSSYYDQIMQDSSGSTFEDIVDAYLAYLQVTVVNPAMDSVLFLMQKFAVDARDGKISKD 264
           KQS+Y  +++ D  GS+FEDI+DAYLAYLQV+VVNPAMD  L ++QKFA DAR+GK+ KD
Sbjct: 383 KQSNYCQKVLDDK-GSSFEDIIDAYLAYLQVSVVNPAMDKALAILQKFADDARNGKVPKD 441

Query: 263 RLQFGAPWRHPPRTDNPTVCLEWAKIQLMDFVHSLVNAEFGV 138
           RL+FGAPWRHPP+ D+P +C  WAK+QLMDFV SLVN +FGV
Sbjct: 442 RLRFGAPWRHPPKRDDPALCSRWAKLQLMDFVQSLVNTDFGV 483


>ref|XP_003601424.1| hypothetical protein MTR_3g080550 [Medicago truncatula]
           gi|355490472|gb|AES71675.1| hypothetical protein
           MTR_3g080550 [Medicago truncatula]
          Length = 554

 Score =  146 bits (368), Expect = 2e-33
 Identities = 67/106 (63%), Positives = 87/106 (82%)
 Frame = -3

Query: 443 KQSSYYDQIMQDSSGSTFEDIVDAYLAYLQVTVVNPAMDSVLFLMQKFAVDARDGKISKD 264
           KQ+++      D + STFEDIVDAYLAYLQ++VVNPAMD    ++QKFA+D R+GK+S D
Sbjct: 368 KQNNHLHTTAADRA-STFEDIVDAYLAYLQISVVNPAMDRASEILQKFAIDVRNGKVSDD 426

Query: 263 RLQFGAPWRHPPRTDNPTVCLEWAKIQLMDFVHSLVNAEFGVCHSI 126
           +L+FGAPWRHPP+ D+P +C+EWAK+QLMDFV SL+NAEFGV + I
Sbjct: 427 KLRFGAPWRHPPKVDDPKLCIEWAKLQLMDFVKSLINAEFGVNYRI 472


>ref|XP_003556841.1| PREDICTED: uncharacterized protein LOC100817889 [Glycine max]
          Length = 603

 Score =  145 bits (367), Expect = 3e-33
 Identities = 68/106 (64%), Positives = 87/106 (82%)
 Frame = -3

Query: 443 KQSSYYDQIMQDSSGSTFEDIVDAYLAYLQVTVVNPAMDSVLFLMQKFAVDARDGKISKD 264
           KQS+YY +  +D + STF DIVDAY+AYLQ+TVVNPA+D  L ++QKFAVD  +GK+S+D
Sbjct: 370 KQSNYYQKPTEDKA-STFVDIVDAYIAYLQITVVNPALDEALEILQKFAVDVYNGKVSED 428

Query: 263 RLQFGAPWRHPPRTDNPTVCLEWAKIQLMDFVHSLVNAEFGVCHSI 126
           RL+FGAPWRHPP+ D+P + +EWAK+QLMDFV SL N EFGV + I
Sbjct: 429 RLRFGAPWRHPPQIDDPKLRMEWAKLQLMDFVQSLANTEFGVNYRI 474


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