BLASTX nr result

ID: Coptis24_contig00021704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021704
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512705.1| conserved hypothetical protein [Ricinus comm...   135   3e-30
ref|XP_002304623.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
emb|CAN82114.1| hypothetical protein VITISV_031339 [Vitis vinifera]   118   6e-25
ref|XP_003616975.1| hypothetical protein MTR_5g086340 [Medicago ...   112   2e-23
ref|XP_003518455.1| PREDICTED: UPF0481 protein At3g47200-like [G...   112   4e-23

>ref|XP_002512705.1| conserved hypothetical protein [Ricinus communis]
           gi|223548666|gb|EEF50157.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 470

 Score =  135 bits (341), Expect = 3e-30
 Identities = 72/138 (52%), Positives = 91/138 (65%)
 Frame = +1

Query: 13  DYAYNDPIFSHHGKIHIMPHIRRDXXXXXXXXXXXXXEILHSIETGKEKNEEFLNKMILK 192
           DYA NDP+FS+HGK++IMP+I RD             + L ++E+GKEK+EEF+NK+ILK
Sbjct: 142 DYAPNDPVFSNHGKLYIMPYIMRDMLMLQNQLPMLVLDKLVAVESGKEKDEEFVNKLILK 201

Query: 193 FCSPNQEFHTMGPCLHVLDVYRKSLLQDXXXXXXXXXXXXXLVHESTGDIIRSAVELHEA 372
           FC P+    ++G CLH LDVYRKSLLQ                 +   +IIRSA EL+EA
Sbjct: 202 FCFPDAPVSSLGKCLHPLDVYRKSLLQKQVGREKRRILRSRR-QKGGNNIIRSATELNEA 260

Query: 373 GIRFKTSKTTSLRDISFR 426
           GIRFK SKT SL+DISFR
Sbjct: 261 GIRFKKSKTRSLKDISFR 278


>ref|XP_002304623.1| predicted protein [Populus trichocarpa] gi|222842055|gb|EEE79602.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/140 (43%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
 Frame = +1

Query: 7   TSDYAYNDPIFSHHGKIHIMPHIRRDXXXXXXXXXXXXXEILHSIETGKEKNEEFLNKMI 186
           +++YA +DPIFS HG+++ +P I+RD               L ++E+   K+EEF+NK++
Sbjct: 140 SNNYAADDPIFSSHGRVYTVPFIKRDMLIVENQLPMLVLYKLVAVESDGTKDEEFVNKLV 199

Query: 187 LKFCS-PNQEFHTMGPCLHVLDVYRKSLLQDXXXXXXXXXXXXXLVHESTGDIIRSAVEL 363
           L FC+ P+     +G CLHVLD+YRKSL+Q               +H+   DI+RSA E+
Sbjct: 200 LTFCNDPDASVLKLGKCLHVLDLYRKSLIQKDPNRKRHQPRVRGGLHKDANDIVRSAAEI 259

Query: 364 HEAGIRFKTSKTTSLRDISF 423
           +EAGIRFK SKT SL+DISF
Sbjct: 260 NEAGIRFKKSKTKSLKDISF 279


>emb|CAN82114.1| hypothetical protein VITISV_031339 [Vitis vinifera]
          Length = 449

 Score =  118 bits (295), Expect = 6e-25
 Identities = 65/139 (46%), Positives = 84/139 (60%), Gaps = 1/139 (0%)
 Frame = +1

Query: 13  DYAYNDPIFSHHGKIHIMPHIRRDXXXXXXXXXXXXXEILHSIETGKEKNEEFLNKMILK 192
           DY  NDPIFS HG+++IMP++RRD             + L ++E+ K K+ E +NK+ILK
Sbjct: 139 DYDPNDPIFSDHGRLYIMPYVRRDMLMLENQLPMLVLDKLLAVESDKAKDPELINKLILK 198

Query: 193 FCSPNQEFHTMGPCLHVLDVYRKSLLQDXXXXXXXXXXXXXLVHESTG-DIIRSAVELHE 369
           F + +     MG CLHVLDVYRKSLLQ+                   G +IIRSA EL E
Sbjct: 199 FFTTSSPEAGMGKCLHVLDVYRKSLLQEGPGRKPRHYKTRSRADNERGEEIIRSATELDE 258

Query: 370 AGIRFKTSKTTSLRDISFR 426
           AGIR K S+T SL+DISF+
Sbjct: 259 AGIRMKKSRTQSLKDISFK 277


>ref|XP_003616975.1| hypothetical protein MTR_5g086340 [Medicago truncatula]
           gi|355518310|gb|AES99933.1| hypothetical protein
           MTR_5g086340 [Medicago truncatula]
          Length = 457

 Score =  112 bits (281), Expect = 2e-23
 Identities = 62/146 (42%), Positives = 86/146 (58%), Gaps = 6/146 (4%)
 Frame = +1

Query: 4   ITSDYAYNDPIFSHHGKIHIMPHIRRDXXXXXXXXXXXXXEILHSIETGKEKNE--EFLN 177
           +  DYA NDP+F  HGK +++P+I+RD               L   ETG E+ +  E LN
Sbjct: 141 VLDDYAENDPVFGEHGKFYVLPYIKRDMLMLENQIPMLVLRTLIQAETGMEQEDDHELLN 200

Query: 178 KMILKFCSPNQEF-HTMGPCLHVLDVYRKSLLQDXXXXXXXXXXXXX---LVHESTGDII 345
           + I+K  +P+     ++G C+H+LDV+RKSL+Q+                L  E+  +II
Sbjct: 201 EKIVKLLNPSTPLIQSLGKCMHILDVFRKSLIQEGPSHPTRMPKATKRNWLTLEAGEEII 260

Query: 346 RSAVELHEAGIRFKTSKTTSLRDISF 423
           RSAVELHEAGIRFK SKT SL+D+SF
Sbjct: 261 RSAVELHEAGIRFKISKTWSLKDVSF 286


>ref|XP_003518455.1| PREDICTED: UPF0481 protein At3g47200-like [Glycine max]
          Length = 459

 Score =  112 bits (279), Expect = 4e-23
 Identities = 65/148 (43%), Positives = 82/148 (55%), Gaps = 7/148 (4%)
 Frame = +1

Query: 1   GITSDYAYNDPIFSHHGKIHIMPHIRRDXXXXXXXXXXXXXEILHSIETGKEKNEEFLNK 180
           G+  DYA NDP+F  HGK++++P+I+RD              IL  IET   + +E L K
Sbjct: 138 GVPDDYADNDPVFGEHGKLNVVPYIKRDMLMLENQLPLMVLRILIEIETDTTQGDELLIK 197

Query: 181 MILKFCSP-NQEFHTMGPCLHVLDVYRKSLLQD------XXXXXXXXXXXXXLVHESTGD 339
            ILKF SP   E  T G C+HVLDVYRKSL+Q                    +      +
Sbjct: 198 QILKFFSPGTPETGTNGKCMHVLDVYRKSLIQQGPTKRTRVSKAKRRRLWLSIEEHDDDE 257

Query: 340 IIRSAVELHEAGIRFKTSKTTSLRDISF 423
           IIRSA+EL +AGIRFK S+T SL DISF
Sbjct: 258 IIRSAMELQDAGIRFKKSRTHSLGDISF 285


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