BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021698
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22243.3| unnamed protein product [Vitis vinifera]               92   3e-17
ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containi...    92   3e-17
emb|CBI36755.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat...    89   4e-16
ref|XP_002515972.1| pentatricopeptide repeat-containing protein,...    87   2e-15

>emb|CBI22243.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/91 (49%), Positives = 59/91 (64%)
 Frame = +3

Query: 9   DDNTLALSKLIAFSAISNQGNLNYSCSLVKRINNPTTFMWNAIIRGFSQSQEPQNAFTWY 188
           + NT AL +LI  S+I+  G + Y+  L   I  P TFMWN +IRG +QS  P NA + Y
Sbjct: 7   NSNTSALRELIYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLY 66

Query: 189 SKMRNSSTLPDNYTYPFLLKACTRLIDLKMG 281
           S+M N    PD +T+PF+LKACTRL  +KMG
Sbjct: 67  SQMENGCVRPDKFTFPFVLKACTRLCWVKMG 97


>ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Vitis vinifera]
          Length = 550

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/91 (49%), Positives = 59/91 (64%)
 Frame = +3

Query: 9   DDNTLALSKLIAFSAISNQGNLNYSCSLVKRINNPTTFMWNAIIRGFSQSQEPQNAFTWY 188
           + NT AL +LI  S+I+  G + Y+  L   I  P TFMWN +IRG +QS  P NA + Y
Sbjct: 42  NSNTSALRELIYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLY 101

Query: 189 SKMRNSSTLPDNYTYPFLLKACTRLIDLKMG 281
           S+M N    PD +T+PF+LKACTRL  +KMG
Sbjct: 102 SQMENGCVRPDKFTFPFVLKACTRLCWVKMG 132


>emb|CBI36755.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 38/94 (40%), Positives = 64/94 (68%)
 Frame = +3

Query: 3   SLDDNTLALSKLIAFSAISNQGNLNYSCSLVKRINNPTTFMWNAIIRGFSQSQEPQNAFT 182
           S+  + + LS+L+ F A S+ GNLNY+ S+  +I+ P+ ++WN++I+G+S S+ P  A T
Sbjct: 32  SVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQIDRPSLYIWNSMIKGYSISESPDEALT 91

Query: 183 WYSKMRNSSTLPDNYTYPFLLKACTRLIDLKMGQ 284
            Y +MR     PD++T+PF+LKAC+ +    +GQ
Sbjct: 92  MYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQ 125


>ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g05240 [Vitis vinifera]
          Length = 565

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 38/94 (40%), Positives = 64/94 (68%)
 Frame = +3

Query: 3   SLDDNTLALSKLIAFSAISNQGNLNYSCSLVKRINNPTTFMWNAIIRGFSQSQEPQNAFT 182
           S+  + + LS+L+ F A S+ GNLNY+ S+  +I+ P+ ++WN++I+G+S S+ P  A T
Sbjct: 32  SVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQIDRPSLYIWNSMIKGYSISESPDEALT 91

Query: 183 WYSKMRNSSTLPDNYTYPFLLKACTRLIDLKMGQ 284
            Y +MR     PD++T+PF+LKAC+ +    +GQ
Sbjct: 92  MYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQ 125


>ref|XP_002515972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544877|gb|EEF46392.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 546

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 37/85 (43%), Positives = 59/85 (69%)
 Frame = +3

Query: 27  LSKLIAFSAISNQGNLNYSCSLVKRINNPTTFMWNAIIRGFSQSQEPQNAFTWYSKMRNS 206
           +SK+++FSA+S+ GN+NYSC ++  + NPT F WN +IRG+S+S+ P  + + + +M   
Sbjct: 49  VSKILSFSALSDSGNINYSCWVLFSLLNPTIFNWNTVIRGYSKSKNPNGSISVFIQMLKV 108

Query: 207 STLPDNYTYPFLLKACTRLIDLKMG 281
              PD  TYPFL+KA  RL+  ++G
Sbjct: 109 GVFPDYLTYPFLVKASARLLKRELG 133