BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021692
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267832.1| PREDICTED: 50S ribosomal protein L22, chloro...    71   1e-10
ref|XP_002524085.1| 50S ribosomal protein L22, putative [Ricinus...    63   3e-08
ref|XP_004139475.1| PREDICTED: 50S ribosomal protein L22, chloro...    57   2e-06
ref|XP_002891694.1| ribosomal protein L22 family protein [Arabid...    56   3e-06
ref|NP_564605.2| Ribosomal protein L.2/L17e family protein [Arab...    55   6e-06

>ref|XP_002267832.1| PREDICTED: 50S ribosomal protein L22, chloroplastic [Vitis
           vinifera] gi|296089316|emb|CBI39088.3| unnamed protein
           product [Vitis vinifera]
          Length = 271

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 51/114 (44%), Positives = 65/114 (57%), Gaps = 16/114 (14%)
 Frame = -1

Query: 296 MGWQRNLLQSIIRNVGIRVEQKFT---NISSSRLYNT------------LNNPSTTRTIH 162
           +GWQR+L +++   +G RVE  +    N S SRL ++               PS T    
Sbjct: 2   VGWQRHL-RNVFTQIGKRVEHNYNVSANFSCSRLESSPLVGELPYLQRLWKLPSATIP-R 59

Query: 161 PFNQYLQQLGISSSRTLLAD-DVKPVASPFAPVLALESGKTDDSQIPVIKRSQV 3
           P+  Y QQLGISSSR LLAD DV PVASP  P LAL  GKT+D ++ V K S+V
Sbjct: 60  PYYYYFQQLGISSSRQLLADSDVTPVASPLTPALALNGGKTEDQKV-VSKPSKV 112


>ref|XP_002524085.1| 50S ribosomal protein L22, putative [Ricinus communis]
           gi|223536653|gb|EEF38295.1| 50S ribosomal protein L22,
           putative [Ricinus communis]
          Length = 278

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 49/118 (41%), Positives = 66/118 (55%), Gaps = 20/118 (16%)
 Frame = -1

Query: 296 MGWQRNLLQSIIRNVGIRVEQKFT---NISSSR--------------LYNTLNNPSTTRT 168
           +GWQR+L Q ++R VG RVE  ++   N SSS               L+    +PST  +
Sbjct: 2   VGWQRHL-QFLLRQVGKRVEHNYSAVSNFSSSSSCVESSLKPGDLPCLHRLWKSPSTNIS 60

Query: 167 IHPFNQYLQQLGISSSRTLLAD--DVKPVASPFAPVLA-LESGKTDDSQIPVIKRSQV 3
              F QYLQQ GISSSR LLAD  +  P+ SP  P L  L SGKT++ +  + K+S+V
Sbjct: 61  -RSFYQYLQQSGISSSRKLLADSSEQTPIRSPLTPALTPLSSGKTEEKK-AICKQSKV 116


>ref|XP_004139475.1| PREDICTED: 50S ribosomal protein L22, chloroplastic-like [Cucumis
           sativus]
          Length = 271

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 16/114 (14%)
 Frame = -1

Query: 296 MGWQRNLLQSIIRNVGIRVEQKFTNISSS--RLYNTLNN-----------PSTTRTIHPF 156
           +GWQR  L+S++ ++  +VE  +   S+S  RL ++L+N           PS+     P 
Sbjct: 2   VGWQR-CLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPD 60

Query: 155 NQYLQQLGISSSRTLLAD-DVKPVASPFAPVLALESGKTDD--SQIPVIKRSQV 3
            + LQQ+GISSSR LLAD   + V+SP    LAL SGK  D   Q  + KRSQV
Sbjct: 61  FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQV 114


>ref|XP_002891694.1| ribosomal protein L22 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297337536|gb|EFH67953.1| ribosomal protein
           L22 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 270

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 13/110 (11%)
 Frame = -1

Query: 293 GWQRNLLQSIIRNVGIRVEQKFTNISSSRLYNTLNNPST-------------TRTIHPFN 153
           GWQRNL Q +IR VG RV  K ++IS++  Y++  N  +             T +  P  
Sbjct: 3   GWQRNL-QIVIRQVGTRV--KNSHISTTANYSSTRNLESPFSQGYLQSLLRPTCSSRPLY 59

Query: 152 QYLQQLGISSSRTLLADDVKPVASPFAPVLALESGKTDDSQIPVIKRSQV 3
            +LQQLGIS+SR L A + +PV+SP +    L SGK ++ +I + KR +V
Sbjct: 60  YHLQQLGISTSRQLQAGE-EPVSSPLSSPALLGSGKEEEQKI-IPKRQKV 107


>ref|NP_564605.2| Ribosomal protein L.2/L17e family protein [Arabidopsis thaliana]
           gi|79319746|ref|NP_001031174.1| Ribosomal protein
           L.2/L17e family protein [Arabidopsis thaliana]
           gi|186490375|ref|NP_001117473.1| Ribosomal protein
           L.2/L17e family protein [Arabidopsis thaliana]
           gi|62321786|dbj|BAD95410.1| chloroplast 50S ribosomal
           protein L22 [Arabidopsis thaliana]
           gi|109946433|gb|ABG48395.1| At1g52370 [Arabidopsis
           thaliana] gi|110742949|dbj|BAE99369.1| putative
           chloroplast 50S ribosomal protein L22 [Arabidopsis
           thaliana] gi|222424158|dbj|BAH20038.1| AT1G52370
           [Arabidopsis thaliana] gi|332194673|gb|AEE32794.1|
           Ribosomal protein L.2/L17e family protein [Arabidopsis
           thaliana] gi|332194674|gb|AEE32795.1| Ribosomal protein
           L.2/L17e family protein [Arabidopsis thaliana]
           gi|332194675|gb|AEE32796.1| Ribosomal protein L.2/L17e
           family protein [Arabidopsis thaliana]
          Length = 269

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 12/109 (11%)
 Frame = -1

Query: 293 GWQRNLLQSIIRNVGIRVEQKFTNISSSRLYNTLNNPS------------TTRTIHPFNQ 150
           GWQ+NL Q +IR VG RV  K ++IS++   +T N  S            +T +  P   
Sbjct: 3   GWQKNL-QIVIRQVGKRV--KDSHISTANYSSTRNLESPFSQGYLQSLLRSTYSSRPLYY 59

Query: 149 YLQQLGISSSRTLLADDVKPVASPFAPVLALESGKTDDSQIPVIKRSQV 3
           +LQQLGIS+SR L A + +PV+SP +    L SGK ++ +I + KR +V
Sbjct: 60  HLQQLGISTSRQLQAGE-EPVSSPLSSPALLGSGKEEEQKI-IPKRQKV 106