BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021686
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001032152.1| zinc ion binding protein [Arabidopsis thalia...   113   1e-23
ref|XP_002866688.1| hypothetical protein ARALYDRAFT_496810 [Arab...   106   2e-21
ref|XP_002310876.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
gb|ACG32061.1| ubiquitin ligase protein FANCL [Zea mays]               92   3e-17
ref|XP_003559474.1| PREDICTED: E3 ubiquitin-protein ligase FANCL...    88   8e-16

>ref|NP_001032152.1| zinc ion binding protein [Arabidopsis thaliana]
           gi|222424329|dbj|BAH20121.1| AT5G65740 [Arabidopsis
           thaliana] gi|332010715|gb|AED98098.1| zinc ion binding
           protein [Arabidopsis thaliana]
          Length = 300

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/105 (50%), Positives = 71/105 (67%)
 Frame = -2

Query: 315 LMNANSEHIEQNRHRELCPSPSFYHLVYAEIEEVGWEHLVKLADDLTYLSFRILDTKKQS 136
           +MN + E + + R  EL  S SFY  VY+EIEE+GWE + +L  DLT+ SF ILD K ++
Sbjct: 1   MMNVSGECVGRERCEELAKSSSFYRKVYSEIEEIGWEPIRRLGGDLTFFSFHILDKKGRA 60

Query: 135 HILEVHLPHSYPRHAPSISADVPYICELNWLVTLRLKDVVHQFRE 1
           H LE+ L   YP   PS+SADVPY+  L W  + RLKDV+HQF++
Sbjct: 61  HNLEIQLNRDYPNSPPSVSADVPYMFTLEWSTSSRLKDVMHQFQK 105


>ref|XP_002866688.1| hypothetical protein ARALYDRAFT_496810 [Arabidopsis lyrata subsp.
           lyrata] gi|297312523|gb|EFH42947.1| hypothetical protein
           ARALYDRAFT_496810 [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/105 (48%), Positives = 69/105 (65%)
 Frame = -2

Query: 315 LMNANSEHIEQNRHRELCPSPSFYHLVYAEIEEVGWEHLVKLADDLTYLSFRILDTKKQS 136
           +M  + E I + R  EL  S SFY  VY+EIEE+GWE L +L  DLT+ SF+I D K ++
Sbjct: 1   MMKGSGECIGRERCEELAKSSSFYRKVYSEIEEIGWEPLRRLGGDLTFFSFQIFDKKGRA 60

Query: 135 HILEVHLPHSYPRHAPSISADVPYICELNWLVTLRLKDVVHQFRE 1
           H LE  L   YP   PS+SADVPY+  L W  + RLKD+++QF++
Sbjct: 61  HNLEFQLNRDYPNSPPSVSADVPYMFTLEWSTSSRLKDLMYQFQK 105


>ref|XP_002310876.1| predicted protein [Populus trichocarpa] gi|222853779|gb|EEE91326.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/76 (56%), Positives = 55/76 (72%)
 Frame = -2

Query: 228 EIEEVGWEHLVKLADDLTYLSFRILDTKKQSHILEVHLPHSYPRHAPSISADVPYICELN 49
           +IEEVGWE LV+   DL +LSFRI D K + HI+E+ L  +YP+  PS+SA+VPYI  + 
Sbjct: 1   QIEEVGWERLVRFGGDLEFLSFRITDKKGRVHIMEIQLDKTYPQKPPSVSAEVPYIFNVK 60

Query: 48  WLVTLRLKDVVHQFRE 1
           W V  RLKD+V QFRE
Sbjct: 61  WSVKSRLKDLVLQFRE 76


>gb|ACG32061.1| ubiquitin ligase protein FANCL [Zea mays]
          Length = 322

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/85 (50%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
 Frame = -2

Query: 255 PSFYHLVYAEIEEVGWEHLVKLADD-LTYLSFRILDTKKQSHILEVHLPHSYPRHAPSIS 79
           PSFY  V+A+IEE+GW+ LV    D ++ L+FR++D   + H+LE+ LP  YP   PSIS
Sbjct: 44  PSFYSSVFAQIEEIGWKQLVSATGDGVSCLTFRVVDEPGRMHLLEITLPMGYPESPPSIS 103

Query: 78  ADVPYICELNWLVTLRLKDVVHQFR 4
           ADVPY+ ++NW    RLKDV+ QF+
Sbjct: 104 ADVPYLPKINWSKNSRLKDVICQFQ 128


>ref|XP_003559474.1| PREDICTED: E3 ubiquitin-protein ligase FANCL-like [Brachypodium
           distachyon]
          Length = 311

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/87 (51%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
 Frame = -2

Query: 255 PSFYHLVYAEIEEVGWEHLVKLADD--LTYLSFRILDTKKQSHILEVHLPHSYPRHAPSI 82
           P+FY  V+A+IEEVGW  LV    D  ++ L+FR++D + + H+LEV LP +YP   PSI
Sbjct: 34  PAFYSSVFAQIEEVGWGRLVTATGDDGVSCLAFRVMDEQGRQHLLEVTLPMNYPACPPSI 93

Query: 81  SADVPYICELNWLVTLRLKDVVHQFRE 1
           SADVP + +L W    RLKDVV QF+E
Sbjct: 94  SADVPCLPKLQWSKLSRLKDVVCQFQE 120