BLASTX nr result

ID: Coptis24_contig00021684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021684
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]   109   5e-22
emb|CBI15337.3| unnamed protein product [Vitis vinifera]              103   4e-20
ref|XP_002517454.1| conserved hypothetical protein [Ricinus comm...    87   5e-15
gb|EAY82372.1| hypothetical protein OsI_37584 [Oryza sativa Indi...    84   4e-14
gb|ABA95877.2| F-box protein interaction domain containing prote...    83   7e-14

>emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]
          Length = 377

 Score =  109 bits (273), Expect = 5e-22
 Identities = 76/197 (38%), Positives = 106/197 (53%), Gaps = 5/197 (2%)
 Frame = -3

Query: 584 DLSYDIIYQIMLRLPIEDILRCKSVCKTWYELTRESHFISFQMSKALCQPSRVILAPLLY 405
           +L  DI+  I+  LPIEDILRC+SVCKTWY LT++S+F   Q  +      R++      
Sbjct: 19  NLPLDIMADILSLLPIEDILRCRSVCKTWYGLTKDSYFFKLQFRRTFYHMPRLMF----- 73

Query: 404 SCYENYRNSLFLIGEEKCS--EIPINHLKLTDYIVTGSCNGLLFIASIYKSDHPAFIYNP 231
                  NS+FL+  ++C   EI +  +   + IV  SCNGLL +AS  +S +P  I NP
Sbjct: 74  --ISKSENSVFLLDGKQCKAREIALPTVLGRNLIVMSSCNGLLCLAS-EESPNPVIISNP 130

Query: 230 STREYKELP---NIDFCTDEVLFGFGFDRIHKKYKVICVYRS*YGDIDYEGSDTEAAVTT 60
            TR+Y  LP   N  +   + L G G+D  + KYKV+  Y      ID       +  T 
Sbjct: 131 ITRKYIVLPESVNASYSFIQ-LVGLGYDPWNMKYKVVRSY------ID------NSKFTR 177

Query: 59  GAIITEGESSWRKLEFP 9
             IIT GE+SWR+L+ P
Sbjct: 178 FEIITLGEASWRQLDVP 194


>emb|CBI15337.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score =  103 bits (257), Expect = 4e-20
 Identities = 73/196 (37%), Positives = 99/196 (50%), Gaps = 4/196 (2%)
 Frame = -3

Query: 584 DLSYDIIYQIMLRLPIEDILRCKSVCKTWYELTRESHFISFQMSKALCQPSRVILAPLLY 405
           DL  ++I +I+ RLPIE ILRC+SVCKTW  + +   FI+ Q  K+  QPSRVIL P+  
Sbjct: 153 DLLPELISEILSRLPIELILRCRSVCKTWNSVIQSPLFINLQARKSHNQPSRVILKPIFG 212

Query: 404 SCYENYRNSLFLIG--EEKCSEIPINHLKLTDYIVTGSCNGLLFIASIYKSDHPAFIYNP 231
                  +SLFL+   E K   I     + +   +  SCNGLL I S  +   P +I NP
Sbjct: 213 GVTATTMHSLFLLDTEERKSRRIHDKSWRFSGLQIMSSCNGLLCITSDSELG-PVYISNP 271

Query: 230 STREYKELPNID--FCTDEVLFGFGFDRIHKKYKVICVYRS*YGDIDYEGSDTEAAVTTG 57
            TRE+  LP+ +  F       G GFD  + KY V+  Y             +++ V   
Sbjct: 272 ITREFVILPSPETGFSLLRHQVGLGFDSSNGKYIVVRAYT----------DKSKSQVNKF 321

Query: 56  AIITEGESSWRKLEFP 9
             I  GE+SWR L  P
Sbjct: 322 EAIMLGENSWRSLTVP 337


>ref|XP_002517454.1| conserved hypothetical protein [Ricinus communis]
           gi|223543465|gb|EEF44996.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 401

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
 Frame = -3

Query: 605 SFERENADLSYDIIYQIMLRLPIEDILRCKSVCKTWYELTRESHFISFQMSKALCQPSRV 426
           SFE+    L  +I + I+ R PI  +L CK V + WY   R     +  +++A  Q    
Sbjct: 18  SFEK----LPQEIYFDILSRQPIVSLLECKPVSRHWYTSVRNPLLANMHLNRAAEQN--- 70

Query: 425 ILAPLLYSCYENYRNSLFLIGEEKCSEIPINHLK------LTDYIVTGSCNGLLFIASIY 264
            L  L +S +   R+ L L+  E      +  LK      L+++ V GSCNGL+ +   Y
Sbjct: 71  -LCLLFFSDWP--RSKLELVQVEHPEPRKLKTLKTPFESVLSEFEVVGSCNGLICLYD-Y 126

Query: 263 KSDHPAFIYNPSTREYKELPNIDFCTDEVL----FGFGFDRIHKKYKVICVYRS*YGDID 96
            SD P +IYNP T E +ELP ++     V+    FGFGF    ++YKVI +     G+ D
Sbjct: 127 FSDDPLYIYNPFTIECRELPRVEASPHSVICRVVFGFGFHPKMEEYKVIKIVYYKQGNND 186

Query: 95  YEGSDTEAAVTTGAIITEGESSWRKL 18
           + G   EA V     +T    +WR +
Sbjct: 187 FSGGAPEAFV-----LTANTPTWRNI 207


>gb|EAY82372.1| hypothetical protein OsI_37584 [Oryza sativa Indica Group]
          Length = 412

 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 69/226 (30%), Positives = 112/226 (49%), Gaps = 20/226 (8%)
 Frame = -3

Query: 626 RTVTLNLSFERENADLSY---DIIYQIMLRLPIEDILRCKSVCKTWYELTRESHFISFQM 456
           +T+ ++++  R    L Y   ++++ ++LRLP + ++R KSVCK W+ +     FI+  +
Sbjct: 32  KTMRIDINSCRSRFLLPYIPDEVMFDVLLRLPSKSLMRFKSVCKAWHAMISSPIFINAHL 91

Query: 455 SKALCQPSRVILAPLLYSCYENYRNSLFLIGEEKCSEIPINHLKLTDY-------IVTGS 297
             +  +PS +++AP  Y   +N +N  FL+G  K      N + L D+       + T +
Sbjct: 92  EWSKLKPSSLLMAPGFYQKQKNGQNIAFLMGLYKYQGGNNNVVHLHDFPRDFPQVLDTWT 151

Query: 296 ----CNGLLFIASIYKSDHPAFIYNPSTREYKELP----NIDFCTDEVLFGFGFDRIHKK 141
               C+GLL ++++ K      IYNPSTRE   LP    N+   T     GFGFD    K
Sbjct: 152 RPVHCDGLLLVSNMSKK---MIIYNPSTREIVSLPKGSRNLHKGTG---IGFGFDPRSSK 205

Query: 140 YKVICVYRS*YGDIDYEGSD-TEAAVTTGAIITEGE-SSWRKLEFP 9
           YKV  V+        Y+  D T   V    ++T G  + WR+ E P
Sbjct: 206 YKVARVF--------YQRDDKTSMLVCKFEVLTLGTINVWRQTEDP 243


>gb|ABA95877.2| F-box protein interaction domain containing protein, expressed
           [Oryza sativa Japonica Group]
          Length = 410

 Score = 82.8 bits (203), Expect = 7e-14
 Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
 Frame = -3

Query: 572 DIIYQIMLRLPIEDILRCKSVCKTWYELTRESHFISFQMSKALCQPSRVILAPLLYSCYE 393
           ++++ ++LRLP + ++R KSVCK W+ +     FI+  +  +  +PS +++AP  Y   +
Sbjct: 38  EVMFDVLLRLPSKSLMRFKSVCKAWHAMISSPIFINAHLEWSKLKPSSLLMAPGFYQKQK 97

Query: 392 NYRNSLFLIGEEKCSEIPINHLKLTDY-------IVTGS----CNGLLFIASIYKSDHPA 246
           N +N  FL+G  K      N + L D+       + T +    C+GLL ++++ K     
Sbjct: 98  NGQNIAFLMGLYKYQGGNNNVVHLHDFPRDFPQVLDTWTRPVHCDGLLLVSNMSKK---M 154

Query: 245 FIYNPSTREYKELP----NIDFCTDEVLFGFGFDRIHKKYKVICVYRS*YGDIDYEGSD- 81
            IYNPSTRE   LP    N+   T     GFGFD    KYKV  V+        Y+  D 
Sbjct: 155 IIYNPSTREIVSLPKGSRNLHKGTG---IGFGFDPRSSKYKVARVF--------YQRDDK 203

Query: 80  TEAAVTTGAIITEGE-SSWRKLEFP 9
           T   V    ++T G  + WR+ E P
Sbjct: 204 TSMLVCKFEVLTLGTINVWRQTEDP 228


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