BLASTX nr result

ID: Coptis24_contig00021669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021669
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282519.2| PREDICTED: uncharacterized protein LOC100255...    60   2e-07
emb|CBI16340.3| unnamed protein product [Vitis vinifera]               60   2e-07
emb|CAN62927.1| hypothetical protein VITISV_029711 [Vitis vinifera]    60   2e-07
ref|XP_002328316.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002314291.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002282519.2| PREDICTED: uncharacterized protein LOC100255350 [Vitis vinifera]
          Length = 846

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/99 (35%), Positives = 50/99 (50%)
 Frame = +1

Query: 1   AQQRRRDKLRNNQQIVSTTDHLQDIHNHLLQFPNHCRVNADPATLTGERNSDLVYDTAMF 180
           AQQ RRDKLR   Q  +   HL++  N L Q   H  +N D   +   RN +++YD  + 
Sbjct: 13  AQQSRRDKLRVQHQSSTPAHHLEEFPNSLEQLSVHPELNPDLIQVRNVRNGNVLYDPIVL 72

Query: 181 SSEMLNFPMPRHPLYARFKDSVCSQETGGDHQSGRLVGL 297
           SSEMLNF    H ++   KD++  Q++    Q      L
Sbjct: 73  SSEMLNFSSNSH-VFLGSKDAMVGQDSNAVSQDASFPNL 110


>emb|CBI16340.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/99 (35%), Positives = 50/99 (50%)
 Frame = +1

Query: 1   AQQRRRDKLRNNQQIVSTTDHLQDIHNHLLQFPNHCRVNADPATLTGERNSDLVYDTAMF 180
           AQQ RRDKLR   Q  +   HL++  N L Q   H  +N D   +   RN +++YD  + 
Sbjct: 11  AQQSRRDKLRVQHQSSTPAHHLEEFPNSLEQLSVHPELNPDLIQVRNVRNGNVLYDPIVL 70

Query: 181 SSEMLNFPMPRHPLYARFKDSVCSQETGGDHQSGRLVGL 297
           SSEMLNF    H ++   KD++  Q++    Q      L
Sbjct: 71  SSEMLNFSSNSH-VFLGSKDAMVGQDSNAVSQDASFPNL 108


>emb|CAN62927.1| hypothetical protein VITISV_029711 [Vitis vinifera]
          Length = 874

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/99 (35%), Positives = 50/99 (50%)
 Frame = +1

Query: 1   AQQRRRDKLRNNQQIVSTTDHLQDIHNHLLQFPNHCRVNADPATLTGERNSDLVYDTAMF 180
           AQQ RRDKLR   Q  +   HL++  N L Q   H  +N D   +   RN +++YD  + 
Sbjct: 11  AQQSRRDKLRVQHQSSTPAHHLEEFPNSLEQLSVHPELNPDLIQVRNVRNGNVLYDPIVL 70

Query: 181 SSEMLNFPMPRHPLYARFKDSVCSQETGGDHQSGRLVGL 297
           SSEMLNF    H ++   KD++  Q++    Q      L
Sbjct: 71  SSEMLNFSSNSH-VFLGSKDAMVGQDSNAVSQDASFPNL 108


>ref|XP_002328316.1| predicted protein [Populus trichocarpa] gi|222837831|gb|EEE76196.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/86 (40%), Positives = 50/86 (58%)
 Frame = +1

Query: 1   AQQRRRDKLRNNQQIVSTTDHLQDIHNHLLQFPNHCRVNADPATLTGERNSDLVYDTAMF 180
           AQQ RRDKLR  QQ +S+   + +  N L  +     ++ DP  +   RN +++YD+ MF
Sbjct: 13  AQQSRRDKLRV-QQSLSSVQQIDEFPNCLEHYSIRPGLSPDPVHVRNIRNGNILYDSTMF 71

Query: 181 SSEMLNFPMPRHPLYARFKDSVCSQE 258
           SSEMLNF    H + A  KD++  QE
Sbjct: 72  SSEMLNFATSSHAVSAS-KDAIVDQE 96


>ref|XP_002314291.1| predicted protein [Populus trichocarpa] gi|222850699|gb|EEE88246.1|
           predicted protein [Populus trichocarpa]
          Length = 835

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/88 (40%), Positives = 47/88 (53%)
 Frame = +1

Query: 1   AQQRRRDKLRNNQQIVSTTDHLQDIHNHLLQFPNHCRVNADPATLTGERNSDLVYDTAMF 180
           AQQ RRDKLR  Q + S   +L D  N L +      ++ D   +   RN + +YD+ MF
Sbjct: 13  AQQSRRDKLRGQQSLTSV-QYLDDYPNSLERISVSPGLSPDLVHVRNNRNDNTIYDSTMF 71

Query: 181 SSEMLNFPMPRHPLYARFKDSVCSQETG 264
           SSE+LNF    H L A  K S+  QE G
Sbjct: 72  SSEILNFATSSHVLSAP-KVSIVDQELG 98


Top