BLASTX nr result

ID: Coptis24_contig00021664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021664
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273827.1| PREDICTED: uncharacterized protein LOC100252...   252   7e-65
ref|XP_002531235.1| conserved hypothetical protein [Ricinus comm...   252   7e-65
ref|XP_002884501.1| hypothetical protein ARALYDRAFT_477820 [Arab...   243   4e-62
ref|NP_187183.3| O-fucosyltransferase family protein [Arabidopsi...   241   1e-61
ref|XP_003534761.1| PREDICTED: uncharacterized protein LOC100785...   239   5e-61

>ref|XP_002273827.1| PREDICTED: uncharacterized protein LOC100252719 [Vitis vinifera]
          Length = 427

 Score =  252 bits (643), Expect = 7e-65
 Identities = 123/188 (65%), Positives = 147/188 (78%)
 Frame = -3

Query: 565 IACRCLSMLFIALVLRAXXXXXXXXXXXFEQNNFDWIHISSFLSPSESGIRKDKYLEVPQ 386
           +A +C+++  IALV RA             QN+F  I+  S  S SE  +RK+K+LEVPQ
Sbjct: 1   MAGKCVALFVIALVFRAAMLPTFSGFGEVAQNSFRVINKGSLSSDSELQMRKNKFLEVPQ 60

Query: 385 IAWGLNNQKIAFARACLTARMLNRTLLMPSLSASLYYKEVDLLQSISFDKVFQFEKFNSR 206
           I WGLNNQKIAFARACLTARM+ RTLLMPSLSASL+YKE+DLLQ ISFDKVFQFE+FNS 
Sbjct: 61  IVWGLNNQKIAFARACLTARMMKRTLLMPSLSASLFYKEIDLLQPISFDKVFQFERFNSL 120

Query: 205 CDGFVRLGRYSDLSNKKEYFEMQKGSGRKWTLERDLTQLRQLREGPIYQVELVRIVGKNP 26
           C+GFVRLGRYSDLSN+ + FE+QKGSGRKWT+ERDL QLR+  + P    E++RI+GKNP
Sbjct: 121 CNGFVRLGRYSDLSNRTQVFELQKGSGRKWTIERDLDQLREFSKEPYDGYEVIRILGKNP 180

Query: 25  FLWQDHWP 2
           FLW DHWP
Sbjct: 181 FLWHDHWP 188


>ref|XP_002531235.1| conserved hypothetical protein [Ricinus communis]
           gi|223529172|gb|EEF31149.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 446

 Score =  252 bits (643), Expect = 7e-65
 Identities = 124/202 (61%), Positives = 148/202 (73%), Gaps = 3/202 (1%)
 Frame = -3

Query: 598 NCKNGRFFSR---SIACRCLSMLFIALVLRAXXXXXXXXXXXFEQNNFDWIHISSFLSPS 428
           N K+ R F R   S+ C+CLS++ I LVLR              Q + D I   S    S
Sbjct: 6   NYKHPRLFGRNLNSVTCKCLSLVVILLVLRVVLLSSFSDYGRINQKDIDLIPSRSLSLDS 65

Query: 427 ESGIRKDKYLEVPQIAWGLNNQKIAFARACLTARMLNRTLLMPSLSASLYYKEVDLLQSI 248
           + G+RKDK+LEVPQI WGLNNQKIAFARACLTARMLNRTLLMP LSASL+YKE+D LQ I
Sbjct: 66  DYGVRKDKFLEVPQIVWGLNNQKIAFARACLTARMLNRTLLMPKLSASLFYKEIDRLQPI 125

Query: 247 SFDKVFQFEKFNSRCDGFVRLGRYSDLSNKKEYFEMQKGSGRKWTLERDLTQLRQLREGP 68
           SFDK+FQFE+FNS C+GFV+LG+YSD+ N    +E+QKGSGR+WT+ERDL QLRQ  + P
Sbjct: 126 SFDKIFQFERFNSLCNGFVQLGQYSDVRNHSGVYELQKGSGRRWTVERDLDQLRQFIQDP 185

Query: 67  IYQVELVRIVGKNPFLWQDHWP 2
               E++RIVGKNPFLW DHWP
Sbjct: 186 YNGHEVIRIVGKNPFLWHDHWP 207


>ref|XP_002884501.1| hypothetical protein ARALYDRAFT_477820 [Arabidopsis lyrata subsp.
           lyrata] gi|297330341|gb|EFH60760.1| hypothetical protein
           ARALYDRAFT_477820 [Arabidopsis lyrata subsp. lyrata]
          Length = 445

 Score =  243 bits (619), Expect = 4e-62
 Identities = 121/201 (60%), Positives = 148/201 (73%), Gaps = 1/201 (0%)
 Frame = -3

Query: 601 LNCKNGRFFSRSIACRCLSMLFIALVLRAXXXXXXXXXXXFEQNNFDWIHISSFLSPSES 422
           L+CKN R FS+S+AC+CL ++ IAL  RA                F   H+S   S S  
Sbjct: 5   LSCKNLRVFSKSVACKCLVLVGIALFYRALLLSYSPRNALSNSLLFRARHMSD--SSSTG 62

Query: 421 GIRKDKYLEVPQIAWGLNNQKIAFARACLTARMLNRTLLMPSLSASLYYKEVDLLQSISF 242
           GIR DK+LEVPQI WGLNNQKIAFARACLTARM+NRTLLMPSLSASL+YKEVD L+ I F
Sbjct: 63  GIRTDKFLEVPQIVWGLNNQKIAFARACLTARMMNRTLLMPSLSASLFYKEVDKLRPIPF 122

Query: 241 DKVFQFEKFNSRCDGFVRLGRYSDLSNKKEYFEMQKGSGRKWTLERDLTQLRQ-LREGPI 65
           DKVFQ E+FNS C GFVRL R+SD+ N+ + F+++KGSGR+WT+ERDL  L+Q  R   I
Sbjct: 123 DKVFQLERFNSLCSGFVRLARFSDVRNRAQVFDLEKGSGRRWTVERDLEHLKQSARNESI 182

Query: 64  YQVELVRIVGKNPFLWQDHWP 2
            + E++R++GKNPFLW DHWP
Sbjct: 183 DEFEVIRVIGKNPFLWHDHWP 203


>ref|NP_187183.3| O-fucosyltransferase family protein [Arabidopsis thaliana]
           gi|6729042|gb|AAF27038.1|AC009177_28 unknown protein
           [Arabidopsis thaliana] gi|332640698|gb|AEE74219.1|
           O-fucosyltransferase family protein [Arabidopsis
           thaliana]
          Length = 445

 Score =  241 bits (615), Expect = 1e-61
 Identities = 121/201 (60%), Positives = 148/201 (73%), Gaps = 1/201 (0%)
 Frame = -3

Query: 601 LNCKNGRFFSRSIACRCLSMLFIALVLRAXXXXXXXXXXXFEQNNFDWIHISSFLSPSES 422
           L+ KN R FS+S+AC+CL ++ IAL  RA                F   H+S   S S  
Sbjct: 5   LSSKNLRIFSKSVACKCLVLVGIALFYRALLLSYSPRNALSNSLLFRDRHMSD--SSSTG 62

Query: 421 GIRKDKYLEVPQIAWGLNNQKIAFARACLTARMLNRTLLMPSLSASLYYKEVDLLQSISF 242
           GIR DK+LEVPQI WGLNNQKIAFARACLTARM+NRTLLMPSLSASL+YKEVD L+ I F
Sbjct: 63  GIRTDKFLEVPQIVWGLNNQKIAFARACLTARMMNRTLLMPSLSASLFYKEVDKLRPIPF 122

Query: 241 DKVFQFEKFNSRCDGFVRLGRYSDLSNKKEYFEMQKGSGRKWTLERDLTQLRQ-LREGPI 65
           DKVFQFE+FNS C GFVRL R+SD+ N+ + F+++KGSGR+WT+ERDL  L+Q  R   I
Sbjct: 123 DKVFQFERFNSLCSGFVRLSRFSDVKNRAQVFDLEKGSGRRWTVERDLEHLKQSARNESI 182

Query: 64  YQVELVRIVGKNPFLWQDHWP 2
            + E++R++GKNPFLW DHWP
Sbjct: 183 DEFEVIRLIGKNPFLWHDHWP 203


>ref|XP_003534761.1| PREDICTED: uncharacterized protein LOC100785035 [Glycine max]
          Length = 438

 Score =  239 bits (610), Expect = 5e-61
 Identities = 116/189 (61%), Positives = 143/189 (75%)
 Frame = -3

Query: 568 SIACRCLSMLFIALVLRAXXXXXXXXXXXFEQNNFDWIHISSFLSPSESGIRKDKYLEVP 389
           SI  +C+ +L   L+LRA            E  N   +++ + L   + GIR+DK+L VP
Sbjct: 10  SITSKCMVLLVTVLILRALLFASFPGFGGIEWGNL--VYLRAPLLNFDFGIRQDKFLVVP 67

Query: 388 QIAWGLNNQKIAFARACLTARMLNRTLLMPSLSASLYYKEVDLLQSISFDKVFQFEKFNS 209
           Q+ WGLNNQKIAFARACLTAR+LNRTLLMPSLSASL+YKE+DLLQ ISFDKVFQFEKFN+
Sbjct: 68  QLVWGLNNQKIAFARACLTARLLNRTLLMPSLSASLFYKEIDLLQPISFDKVFQFEKFNA 127

Query: 208 RCDGFVRLGRYSDLSNKKEYFEMQKGSGRKWTLERDLTQLRQLREGPIYQVELVRIVGKN 29
            C GFVRLGRYSD+ N+ E  EM+KGSGR+WT+ERDL+QL++  EG     E++RI+GKN
Sbjct: 128 LCRGFVRLGRYSDVLNRTEVLEMEKGSGRRWTVERDLSQLKEHSEGSFDDYEIIRIIGKN 187

Query: 28  PFLWQDHWP 2
           PFLW DHWP
Sbjct: 188 PFLWHDHWP 196


Top