BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021651
         (1537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632309.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   550   e-154
ref|XP_002307595.1| f-box family protein [Populus trichocarpa] g...   548   e-153
ref|XP_002524761.1| Protein AFR, putative [Ricinus communis] gi|...   547   e-153
ref|XP_002300832.1| f-box family protein [Populus trichocarpa] g...   543   e-152
ref|XP_003536597.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   541   e-151

>ref|XP_003632309.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like isoform 1 [Vitis
            vinifera] gi|359479635|ref|XP_003632310.1| PREDICTED:
            F-box/kelch-repeat protein SKIP30-like isoform 2 [Vitis
            vinifera] gi|359479637|ref|XP_003632311.1| PREDICTED:
            F-box/kelch-repeat protein SKIP30-like isoform 3 [Vitis
            vinifera]
          Length = 345

 Score =  550 bits (1417), Expect = e-154
 Identities = 259/347 (74%), Positives = 299/347 (86%)
 Frame = +1

Query: 259  MSGLIEGLPDAVALRCLARVPLYLHPNLQLVCRSWRGALHSREFFRSRREVGASEDLLCV 438
            MSGLIEGLPDAVALRCLA VP YLHP L+LV RSWR A+   E F++R+EVG+SEDLLCV
Sbjct: 1    MSGLIEGLPDAVALRCLAWVPFYLHPRLELVSRSWRDAIRGPELFKARQEVGSSEDLLCV 60

Query: 439  CAFEPENLWQLYDPRRDLWMTVPVLPSDIRHLANFGVVSTAGKLFVLGGGSDAVDPLTGD 618
            CAF+PENLWQLYDPR+DLW+++PVLPS IRHLA+FG VSTAGKLFVLGGGSDAVDPLTGD
Sbjct: 61   CAFDPENLWQLYDPRKDLWISLPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120

Query: 619  HYGIFASNEVWSYDPLLRQWARRASMLVHRAMFACCVLDGKIVVAGGFTTCRKSISKAEA 798
              G FA+NEVWSYDP++RQWA RA MLV RAMFACCVLDGKIVVAGGFT+CRKSIS+AE 
Sbjct: 121  QDGSFATNEVWSYDPIIRQWAPRAPMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEI 180

Query: 799  YDLEKDVWIAIPDLPHTHNSACSGVLINGKVHVLHKGLSTVQVFENAEWRWVVEDYGWLQ 978
            YD EKD W++IPDL  THNSACSGV+++GKVHVLHKGL+TVQ+ +     W VEDYGWLQ
Sbjct: 181  YDPEKDAWVSIPDLHRTHNSACSGVVLDGKVHVLHKGLTTVQILDKVGPGWRVEDYGWLQ 240

Query: 979  GPMAVVRGELYVLSHGFIIKQNREQRKRKILASASDFKSRIGFAMIGLGDNLYVIGGVIG 1158
            GPMA+V+G LYV+SHG I KQ RE   +K++ SAS+F+ RIGFAM GL D +YVIGGVIG
Sbjct: 241  GPMAIVQGALYVMSHGIIFKQERE--VKKMVVSASEFRRRIGFAMTGLRDEIYVIGGVIG 298

Query: 1159 PGRWNLDIKPLSDVDVLTVGSERPTWRMVTPMTECHGSVLGCTMLRI 1299
            P RWN DIKPLSDVDVLT+GSERP WR V+PM++C G++ GCT LRI
Sbjct: 299  PDRWNWDIKPLSDVDVLTIGSERPAWRQVSPMSQCRGTIFGCTQLRI 345


>ref|XP_002307595.1| f-box family protein [Populus trichocarpa]
            gi|118482816|gb|ABK93324.1| unknown [Populus trichocarpa]
            gi|222857044|gb|EEE94591.1| f-box family protein [Populus
            trichocarpa]
          Length = 345

 Score =  548 bits (1412), Expect = e-153
 Identities = 259/347 (74%), Positives = 297/347 (85%)
 Frame = +1

Query: 259  MSGLIEGLPDAVALRCLARVPLYLHPNLQLVCRSWRGALHSREFFRSRREVGASEDLLCV 438
            MS LIEGLPDAVA+RC+ARVP YLHP L+LV RSWR  + S E F++R+EVG++EDLLCV
Sbjct: 1    MSELIEGLPDAVAIRCIARVPFYLHPKLELVSRSWRAVVRSPELFKARQEVGSAEDLLCV 60

Query: 439  CAFEPENLWQLYDPRRDLWMTVPVLPSDIRHLANFGVVSTAGKLFVLGGGSDAVDPLTGD 618
            CAF+PENLWQLYDP RDLW+T+PVLPS IRHLA+FGVVS+AGKLFVLGGGSDAVDPLTGD
Sbjct: 61   CAFDPENLWQLYDPHRDLWITLPVLPSKIRHLAHFGVVSSAGKLFVLGGGSDAVDPLTGD 120

Query: 619  HYGIFASNEVWSYDPLLRQWARRASMLVHRAMFACCVLDGKIVVAGGFTTCRKSISKAEA 798
              G FA+NEVWSYDP+LRQWA RASMLV RAMFAC  L+GKIVVAGGFT+CRKSIS+AE 
Sbjct: 121  QDGSFATNEVWSYDPVLRQWAARASMLVPRAMFACGTLNGKIVVAGGFTSCRKSISQAEM 180

Query: 799  YDLEKDVWIAIPDLPHTHNSACSGVLINGKVHVLHKGLSTVQVFENAEWRWVVEDYGWLQ 978
            YD EKDVWI IPDL  THNS CSGV+I GK+HVLH+GLSTVQV +N    W VEDYGWLQ
Sbjct: 181  YDPEKDVWIPIPDLHRTHNSTCSGVVIGGKLHVLHRGLSTVQVLDNVGSGWTVEDYGWLQ 240

Query: 979  GPMAVVRGELYVLSHGFIIKQNREQRKRKILASASDFKSRIGFAMIGLGDNLYVIGGVIG 1158
            GPMAVV   LYV+SHG I KQ  E + RK++ SAS+F+ RIGFAM+GLGD++YVIGGVIG
Sbjct: 241  GPMAVVHDALYVMSHGLIFKQ--EGKTRKVVVSASEFRKRIGFAMMGLGDDIYVIGGVIG 298

Query: 1159 PGRWNLDIKPLSDVDVLTVGSERPTWRMVTPMTECHGSVLGCTMLRI 1299
            P RWN DI+P+SDVD+LTVG +RPTWR  TPMT C G++LGCT LRI
Sbjct: 299  PDRWNWDIRPMSDVDILTVGGDRPTWRQATPMTRCRGTILGCTQLRI 345


>ref|XP_002524761.1| Protein AFR, putative [Ricinus communis] gi|223535945|gb|EEF37604.1|
            Protein AFR, putative [Ricinus communis]
          Length = 345

 Score =  547 bits (1409), Expect = e-153
 Identities = 258/347 (74%), Positives = 294/347 (84%)
 Frame = +1

Query: 259  MSGLIEGLPDAVALRCLARVPLYLHPNLQLVCRSWRGALHSREFFRSRREVGASEDLLCV 438
            MS LIEGLPDA+A+RC+ARVP YLHP L+LV  SWR A+ S E F++R+EVG++EDLLCV
Sbjct: 1    MSELIEGLPDAIAIRCIARVPFYLHPKLELVSHSWRSAIRSPELFKARQEVGSAEDLLCV 60

Query: 439  CAFEPENLWQLYDPRRDLWMTVPVLPSDIRHLANFGVVSTAGKLFVLGGGSDAVDPLTGD 618
            CAFEPENLWQLYDP RDLW+T+PVLPS IRHLA+FGVVSTAGKL+VLGGGSDAVDPLTGD
Sbjct: 61   CAFEPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLYVLGGGSDAVDPLTGD 120

Query: 619  HYGIFASNEVWSYDPLLRQWARRASMLVHRAMFACCVLDGKIVVAGGFTTCRKSISKAEA 798
              G FA+NEVWSYDP++RQWA RASMLV RAMFACCVL GKIVVAGGFT+CRKSIS+AE 
Sbjct: 121  QDGNFATNEVWSYDPVIRQWALRASMLVPRAMFACCVLKGKIVVAGGFTSCRKSISQAEM 180

Query: 799  YDLEKDVWIAIPDLPHTHNSACSGVLINGKVHVLHKGLSTVQVFENAEWRWVVEDYGWLQ 978
            YD EKDVWI IPDL  THNSACSG++I GKVH+LHKGLS VQV +N    W VEDY WLQ
Sbjct: 181  YDPEKDVWIPIPDLHRTHNSACSGIVIGGKVHILHKGLSAVQVLDNVGAGWTVEDYNWLQ 240

Query: 979  GPMAVVRGELYVLSHGFIIKQNREQRKRKILASASDFKSRIGFAMIGLGDNLYVIGGVIG 1158
            GPMAVV G LYV+SHG I KQ  E + RK++ SAS+F+ RIGFAM GLGD++YVIGGVIG
Sbjct: 241  GPMAVVHGALYVMSHGLICKQ--EGKVRKVVVSASEFRRRIGFAMTGLGDDIYVIGGVIG 298

Query: 1159 PGRWNLDIKPLSDVDVLTVGSERPTWRMVTPMTECHGSVLGCTMLRI 1299
            P RWN DIKP+SDVD+L VG ERPTWR   PM+ C G++LGC  LRI
Sbjct: 299  PDRWNWDIKPMSDVDILAVGGERPTWRQAAPMSRCRGTILGCAQLRI 345


>ref|XP_002300832.1| f-box family protein [Populus trichocarpa]
            gi|222842558|gb|EEE80105.1| f-box family protein [Populus
            trichocarpa]
          Length = 345

 Score =  543 bits (1398), Expect = e-152
 Identities = 254/347 (73%), Positives = 296/347 (85%)
 Frame = +1

Query: 259  MSGLIEGLPDAVALRCLARVPLYLHPNLQLVCRSWRGALHSREFFRSRREVGASEDLLCV 438
            MS LIEGLPDAVA+RC+ARVP YLHP L++V RSW+ A+ S E F++R+EVG++EDLLCV
Sbjct: 1    MSELIEGLPDAVAIRCIARVPFYLHPKLEVVSRSWQAAVRSTELFKARQEVGSAEDLLCV 60

Query: 439  CAFEPENLWQLYDPRRDLWMTVPVLPSDIRHLANFGVVSTAGKLFVLGGGSDAVDPLTGD 618
            CAF+PENLWQLYDP RDLW+T+P+LPS IRHLA+FGVV +AGKLFVLGGGSDAVDPLTGD
Sbjct: 61   CAFDPENLWQLYDPLRDLWITLPILPSKIRHLAHFGVVCSAGKLFVLGGGSDAVDPLTGD 120

Query: 619  HYGIFASNEVWSYDPLLRQWARRASMLVHRAMFACCVLDGKIVVAGGFTTCRKSISKAEA 798
              G FA+NEVWSYDP+LR+WA RASMLV RAMFACC L+GKIVVAGGFT+C+KSIS+AE 
Sbjct: 121  QDGSFATNEVWSYDPVLREWAARASMLVPRAMFACCALNGKIVVAGGFTSCQKSISQAEM 180

Query: 799  YDLEKDVWIAIPDLPHTHNSACSGVLINGKVHVLHKGLSTVQVFENAEWRWVVEDYGWLQ 978
            YD EKDVW+ IPDL  THNSACSGV+I GK+HVLH+GLSTVQV ++    W VEDYGWLQ
Sbjct: 181  YDPEKDVWVPIPDLHRTHNSACSGVVIGGKLHVLHRGLSTVQVLDSIGSGWTVEDYGWLQ 240

Query: 979  GPMAVVRGELYVLSHGFIIKQNREQRKRKILASASDFKSRIGFAMIGLGDNLYVIGGVIG 1158
            GPMAVV   LYV+SHG I+KQ  E + RK++ SAS+F+ RIGFAM GLGD +YVIGGVIG
Sbjct: 241  GPMAVVHDALYVMSHGLIVKQ--EGKTRKVVVSASEFRKRIGFAMTGLGDEMYVIGGVIG 298

Query: 1159 PGRWNLDIKPLSDVDVLTVGSERPTWRMVTPMTECHGSVLGCTMLRI 1299
            P RWN DIKP+SDVD+LTVG ERPTWR  TPMT C G++ GC  LRI
Sbjct: 299  PDRWNWDIKPVSDVDILTVGGERPTWRQATPMTRCRGTIRGCAQLRI 345


>ref|XP_003536597.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like isoform 1 [Glycine
            max] gi|356536141|ref|XP_003536598.1| PREDICTED:
            F-box/kelch-repeat protein SKIP30-like isoform 2 [Glycine
            max] gi|356536143|ref|XP_003536599.1| PREDICTED:
            F-box/kelch-repeat protein SKIP30-like isoform 3 [Glycine
            max]
          Length = 344

 Score =  541 bits (1394), Expect = e-151
 Identities = 256/347 (73%), Positives = 299/347 (86%)
 Frame = +1

Query: 259  MSGLIEGLPDAVALRCLARVPLYLHPNLQLVCRSWRGALHSREFFRSRREVGASEDLLCV 438
            MSGLIEGLPDAVA+RCLA VP YLHP L+LV R+WR  +   E F++R+E+G+SEDLLCV
Sbjct: 1    MSGLIEGLPDAVAIRCLAWVPFYLHPKLELVSRAWRAVVRGPELFKARQELGSSEDLLCV 60

Query: 439  CAFEPENLWQLYDPRRDLWMTVPVLPSDIRHLANFGVVSTAGKLFVLGGGSDAVDPLTGD 618
            CAFEPENLWQLYDP+RDLW+T+PVLPS IRHL++FG VSTAGKLFV+GGGSDAVDPLTGD
Sbjct: 61   CAFEPENLWQLYDPQRDLWITLPVLPSRIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGD 120

Query: 619  HYGIFASNEVWSYDPLLRQWARRASMLVHRAMFACCVLDGKIVVAGGFTTCRKSISKAEA 798
              G FA+NEVWSYDP++RQW+ RA+MLV R+MFACCV++GKIVVAGGFT+CRKSIS+AE 
Sbjct: 121  QDGCFATNEVWSYDPVVRQWSPRAAMLVPRSMFACCVMNGKIVVAGGFTSCRKSISQAEI 180

Query: 799  YDLEKDVWIAIPDLPHTHNSACSGVLINGKVHVLHKGLSTVQVFENAEWRWVVEDYGWLQ 978
            YD EKDVWI +PDL  THNSACSGV+I GKVHVLHK +STVQV +NA  +W VE+YGWL 
Sbjct: 181  YDPEKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVLDNA-GQWTVEEYGWLH 239

Query: 979  GPMAVVRGELYVLSHGFIIKQNREQRKRKILASASDFKSRIGFAMIGLGDNLYVIGGVIG 1158
            G MAV+R  LYV+SHG IIKQ  +++ RK++ SAS+F+ RIGFAMIGLGD LYVIGGVIG
Sbjct: 240  GQMAVIRDALYVISHGLIIKQ--DKKMRKVVGSASEFRRRIGFAMIGLGDELYVIGGVIG 297

Query: 1159 PGRWNLDIKPLSDVDVLTVGSERPTWRMVTPMTECHGSVLGCTMLRI 1299
            P RWN DIKPLSDVDVLT+ SERPTWR   PMT C G++LGCT LRI
Sbjct: 298  PDRWNWDIKPLSDVDVLTLASERPTWRQAAPMTRCGGTILGCTQLRI 344