BLASTX nr result

ID: Coptis24_contig00021650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021650
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN73053.2| mini-chromosome maintenance protein MCM3 [Pisum s...   223   2e-56
ref|XP_003608493.1| DNA replication licensing factor MCM3-like p...   221   4e-56
emb|CBI30852.3| unnamed protein product [Vitis vinifera]              220   8e-56
ref|XP_002276065.1| PREDICTED: DNA replication licensing factor ...   220   8e-56
ref|XP_002305335.1| predicted protein [Populus trichocarpa] gi|2...   219   2e-55

>gb|AAN73053.2| mini-chromosome maintenance protein MCM3 [Pisum sativum]
          Length = 710

 Score =  223 bits (567), Expect = 2e-56
 Identities = 106/116 (91%), Positives = 114/116 (98%)
 Frame = +1

Query: 1   PTGSVYPTRDESGNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVDA 180
           PTGSVYPTRDE+GNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVI EDDLVD+
Sbjct: 97  PTGSVYPTRDENGNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIAEDDLVDS 156

Query: 181 CKPGDRVAIVGVYKALPGKSQGSVNGVFRTILIANNVSLLNKEANAPNYTTDDLKN 348
           CKPGDRVAIVG+YKALPGKS+GSVNGVFRT+LIANNV+LLNKEANAP Y+T+DLKN
Sbjct: 157 CKPGDRVAIVGIYKALPGKSKGSVNGVFRTVLIANNVALLNKEANAPIYSTEDLKN 212


>ref|XP_003608493.1| DNA replication licensing factor MCM3-like protein [Medicago
           truncatula] gi|355509548|gb|AES90690.1| DNA replication
           licensing factor MCM3-like protein [Medicago truncatula]
          Length = 773

 Score =  221 bits (564), Expect = 4e-56
 Identities = 105/116 (90%), Positives = 113/116 (97%)
 Frame = +1

Query: 1   PTGSVYPTRDESGNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVDA 180
           PTGSVYPTRDESGNLLVTEYG+CKYKDHQTLSMQEVPENSAPGQLPRTVD+I EDDLVD+
Sbjct: 164 PTGSVYPTRDESGNLLVTEYGMCKYKDHQTLSMQEVPENSAPGQLPRTVDIIAEDDLVDS 223

Query: 181 CKPGDRVAIVGVYKALPGKSQGSVNGVFRTILIANNVSLLNKEANAPNYTTDDLKN 348
           CKPGDRVAIVG+YKALPGKS+GSVNGVFRT+LIANNVSLLNKEANAP Y+ +DLKN
Sbjct: 224 CKPGDRVAIVGIYKALPGKSKGSVNGVFRTVLIANNVSLLNKEANAPIYSPEDLKN 279


>emb|CBI30852.3| unnamed protein product [Vitis vinifera]
          Length = 776

 Score =  220 bits (561), Expect = 8e-56
 Identities = 105/116 (90%), Positives = 113/116 (97%)
 Frame = +1

Query: 1   PTGSVYPTRDESGNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVDA 180
           PTGSVYPTRDE+GNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVD+
Sbjct: 165 PTGSVYPTRDENGNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVDS 224

Query: 181 CKPGDRVAIVGVYKALPGKSQGSVNGVFRTILIANNVSLLNKEANAPNYTTDDLKN 348
           CKPGDRVAIVG+YKA+PGKS+GSVNGVFRT+LIANNVSLLNKEAN P YT +DLK+
Sbjct: 225 CKPGDRVAIVGIYKAIPGKSKGSVNGVFRTVLIANNVSLLNKEANTPIYTPEDLKH 280


>ref|XP_002276065.1| PREDICTED: DNA replication licensing factor MCM3 homolog 1-like
           [Vitis vinifera]
          Length = 773

 Score =  220 bits (561), Expect = 8e-56
 Identities = 105/116 (90%), Positives = 113/116 (97%)
 Frame = +1

Query: 1   PTGSVYPTRDESGNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVDA 180
           PTGSVYPTRDE+GNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVD+
Sbjct: 162 PTGSVYPTRDENGNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVDS 221

Query: 181 CKPGDRVAIVGVYKALPGKSQGSVNGVFRTILIANNVSLLNKEANAPNYTTDDLKN 348
           CKPGDRVAIVG+YKA+PGKS+GSVNGVFRT+LIANNVSLLNKEAN P YT +DLK+
Sbjct: 222 CKPGDRVAIVGIYKAIPGKSKGSVNGVFRTVLIANNVSLLNKEANTPIYTPEDLKH 277


>ref|XP_002305335.1| predicted protein [Populus trichocarpa] gi|222848299|gb|EEE85846.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score =  219 bits (557), Expect = 2e-55
 Identities = 105/116 (90%), Positives = 112/116 (96%)
 Frame = +1

Query: 1   PTGSVYPTRDESGNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVDA 180
           PTGSVYPTRDE+G+LLVTEYGLC YKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVD 
Sbjct: 156 PTGSVYPTRDENGHLLVTEYGLCNYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVDC 215

Query: 181 CKPGDRVAIVGVYKALPGKSQGSVNGVFRTILIANNVSLLNKEANAPNYTTDDLKN 348
           CKPGDRVAIVG+YKALPGKS+GSVNGVFRT+LIANNVSLLNKEANAP Y+ +DLKN
Sbjct: 216 CKPGDRVAIVGIYKALPGKSKGSVNGVFRTVLIANNVSLLNKEANAPIYSPEDLKN 271


Top