BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021643
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...   127   7e-28
ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    92   6e-17
ref|XP_004151734.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    87   1e-15
ref|XP_002514252.1| RING-H2 finger protein ATL4J precursor, puta...    87   1e-15
ref|XP_002308607.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15

>ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42 [Vitis vinifera]
          Length = 423

 Score =  127 bits (320), Expect = 7e-28
 Identities = 69/120 (57%), Positives = 91/120 (75%), Gaps = 1/120 (0%)
 Frame = -2

Query: 491 MKLKEDMDKKRLFESKVNRIERSHSVTGSSLPSTSKSEWNVSNTSRFLIPAEKRSMSEIV 312
           MK+KE++++KR+FES+V+RI  S+ V+ S LPSTSK+E N  + SRFL P EKRSMSEI 
Sbjct: 302 MKIKEEIERKRIFESRVSRINHSNPVSSSGLPSTSKTEANSGHASRFLHPTEKRSMSEIT 361

Query: 311 NFSRFVDHYGLKNRLRDSPDV-NITREEKMRKLWSPIARRTVVEWFAGRERSKQSQYSRQ 135
             SR+ D +  KNR+R+S    N  +EE+MR+LW PIARRT VEWFA RE S+QSQ ++Q
Sbjct: 362 ACSRYAD-FSTKNRIRESSLAQNNIKEERMRRLWLPIARRT-VEWFANREGSQQSQNTKQ 419


>ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max]
          Length = 426

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 55/125 (44%), Positives = 77/125 (61%), Gaps = 2/125 (1%)
 Frame = -2

Query: 503 NERAMKLKEDMDKKRLFESKVNRIERSHSVTGSSLPSTSKSEWNVSNTSRFLIPAEKRSM 324
           NE+ M +KE+M++K  FESKV  +    SV+   L  TS S    ++  ++  P EKRSM
Sbjct: 299 NEQIMNIKEEMERKISFESKVGVLNNIKSVSDKHLLFTSDSAGKSTHAPKYANPGEKRSM 358

Query: 323 SEIVNFSRFVDHYGLKNRL-RDSPDV-NITREEKMRKLWSPIARRTVVEWFAGRERSKQS 150
           SEI   SRF D  G+K R+ +DS  + N  +EE+MR++W PIARRT  +WF  RER  Q 
Sbjct: 359 SEITAVSRFGD-LGMKMRVFKDSSSLQNNLKEERMRQIWFPIARRT-AQWFVNRERRSQQ 416

Query: 149 QYSRQ 135
             ++Q
Sbjct: 417 SQNKQ 421


>ref|XP_004151734.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis sativus]
           gi|449531894|ref|XP_004172920.1| PREDICTED: E3
           ubiquitin-protein ligase ATL42-like [Cucumis sativus]
          Length = 412

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 55/128 (42%), Positives = 82/128 (64%), Gaps = 6/128 (4%)
 Frame = -2

Query: 500 ERAMKLKEDMDKKRLFESKVNRIERSHSVTGSSLPSTSKSEWNVSNTSRFLIPAEKRSMS 321
           E  +K+KE+M+ KR FESK+N+I +S+S+ G   PSTS+S  N S T R   P  +RS+S
Sbjct: 283 EEILKIKEEMEIKRSFESKLNKITQSNSILG--YPSTSQSSTNPSQT-RITSPDARRSVS 339

Query: 320 EIVNFSRF-----VDHYGLKNRLRDSPDV-NITREEKMRKLWSPIARRTVVEWFAGRERS 159
           EI   SRF       ++  K +  +S D+ +  ++E+MR++W PIA+RT V+WFA RE  
Sbjct: 340 EITGVSRFGHDDLYMNFNRKFKNGESSDLESNVKQERMREIWYPIAKRT-VQWFANRETR 398

Query: 158 KQSQYSRQ 135
            Q+  +RQ
Sbjct: 399 FQTAENRQ 406


>ref|XP_002514252.1| RING-H2 finger protein ATL4J precursor, putative [Ricinus communis]
           gi|223546708|gb|EEF48206.1| RING-H2 finger protein ATL4J
           precursor, putative [Ricinus communis]
          Length = 267

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 54/130 (41%), Positives = 80/130 (61%), Gaps = 4/130 (3%)
 Frame = -2

Query: 503 NERAMKLKEDMDKKRLFESKVNRIERSHSVTG-SSLPSTSKSEWNVS--NTSRFLIPAEK 333
           NE+ +K+KE+M+KKRLFESK + I    S T     PSTS     +S  NTS  +   ++
Sbjct: 138 NEQMVKIKEEMEKKRLFESKFSTISNCDSPTPFPGNPSTSSDSNRISGHNTSSIIDSGDR 197

Query: 332 RSMSEIVNFSRFVDHYGLKNRLRDS-PDVNITREEKMRKLWSPIARRTVVEWFAGRERSK 156
           RS+SEI   SRF  +  +K  +R+S    N   E+++R+ W PIARRT V+WFA RE++ 
Sbjct: 198 RSVSEITGLSRF-RNVSIKKTIRESFSGENNREEDRVRRQWLPIARRT-VQWFANREKTS 255

Query: 155 QSQYSRQLSI 126
           Q   +R+ ++
Sbjct: 256 QQTQNRRQTL 265


>ref|XP_002308607.1| predicted protein [Populus trichocarpa] gi|222854583|gb|EEE92130.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 56/128 (43%), Positives = 80/128 (62%), Gaps = 2/128 (1%)
 Frame = -2

Query: 500 ERAMKLKEDMDKKRLFESKVNRIERSHSVTGSSLPSTSKSEWNVSNTSRFLIPAEKRSMS 321
           E   K+K+D ++KRL + +   ++RS+SV  SSL           N+S+ L P  KRS S
Sbjct: 298 ENLEKVKDDTERKRLSKPQFPTVDRSNSVPSSSL-----------NSSKMLNPVGKRSTS 346

Query: 320 EIVNFSRFVDHYGLKNRLRDSPDV-NITREEKMRKLWSPIARRTVVEWFAGRERS-KQSQ 147
           EI  FSRF      KN++++S  + N  ++E++R LW PIARRT V+WFAGRER+ +Q +
Sbjct: 347 EITIFSRF-RQLSAKNKMKESASLGNGGKDERIRMLWLPIARRT-VQWFAGRERNLRQLE 404

Query: 146 YSRQLSIV 123
           Y RQ S V
Sbjct: 405 YERQASNV 412