BLASTX nr result

ID: Coptis24_contig00021631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021631
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621967.1| Heat shock protein [Medicago truncatula] gi|...    65   6e-09
gb|ABN09155.1| Polynucleotidyl transferase, Ribonuclease H fold ...    60   1e-07
gb|ABD32287.2| Polynucleotidyl transferase, Ribonuclease H fold ...    60   2e-07
gb|AFK46266.1| unknown [Medicago truncatula]                           56   4e-06
ref|XP_003636507.1| 70 kDa peptidyl-prolyl isomerase [Medicago t...    55   6e-06

>ref|XP_003621967.1| Heat shock protein [Medicago truncatula]
           gi|357503391|ref|XP_003621984.1| Heat shock protein
           [Medicago truncatula] gi|355496982|gb|AES78185.1| Heat
           shock protein [Medicago truncatula]
           gi|355496999|gb|AES78202.1| Heat shock protein [Medicago
           truncatula]
          Length = 553

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
 Frame = -3

Query: 261 VIGVQCAITKGWLKVWVETDSKAAKIAFEIGEI-PWAMQARWKNCQRKLHTFN--ITSIW 91
           ++ V+CAI + W  +W+E+DSK A +A +   I PW ++ RW NC   +   N  IT I+
Sbjct: 349 ILAVECAIDRNWNNLWIESDSKLANLAVKSPNIVPWQLKNRWLNCVHLMSNMNCMITHIY 408

Query: 90  REANFSADAPSKAGAALN 37
           RE N  AD  ++ G AL+
Sbjct: 409 REGNHCADKLARLGLALD 426


>gb|ABN09155.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 99

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
 Frame = -3

Query: 252 VQCAITKGWLKVWVETDSKAAKIAFEIGE-IPWAMQARWKNCQRKLH--TFNITSIWREA 82
           ++ A  +G+ ++W+ETDSK A +AF+    IPW ++ RW NC   +    F IT I+RE 
Sbjct: 4   IEIAKQRGYSRLWIETDSKLAVLAFKSSNLIPWKIRNRWDNCMEYISNIAFLITHIYREG 63

Query: 81  NFSADAPSKAGAALNEQEVF 22
           N  AD  +  G +LN   ++
Sbjct: 64  NVCADKFANIGLSLNSLVIY 83


>gb|ABD32287.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 111

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
 Frame = -3

Query: 252 VQCAITKGWLKVWVETDSKAAKIAFE-IGEIPWAMQARWKNCQRKLH--TFNITSIWREA 82
           ++ A + G+  +W+++DS+   +AF+ I  +PWA++ RW+NC +  H   F  T I+RE 
Sbjct: 4   IELASSMGFFNIWLQSDSQLVILAFKSISIVPWALRNRWENCLKLTHRMRFCATHIYREG 63

Query: 81  NFSADAPSKAGAALNEQEVFVLDGKP 4
           N  AD+ +  G  L+  ++F  D  P
Sbjct: 64  NTCADSLANFGLTLSSLDLFWFDTVP 89


>gb|AFK46266.1| unknown [Medicago truncatula]
          Length = 140

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
 Frame = -3

Query: 249 QCAITKGWLKVWVETDSKAAKIAFEIGEI-PWAMQARWKNCQRKLH--TFNITSIWREAN 79
           + A   G+  VW+E+DS+   +AF+   + PW ++ RW+NC    H   F  + I+RE N
Sbjct: 34  EVAALMGYCNVWLESDSQLVILAFKSNSVVPWGLRNRWENCIHITHRMRFCASHIYREGN 93

Query: 78  FSADAPSKAGAALNEQEVFVLDGKP 4
             AD+ +  G +L+  ++F  D  P
Sbjct: 94  ICADSLANFGLSLSSLDLFWFDSIP 118


>ref|XP_003636507.1| 70 kDa peptidyl-prolyl isomerase [Medicago truncatula]
           gi|355502442|gb|AES83645.1| 70 kDa peptidyl-prolyl
           isomerase [Medicago truncatula]
          Length = 653

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
 Frame = -3

Query: 264 AVIGVQCAITKGWLKVWVETDSKAAKIAF-EIGEIPWAMQARWKNCQRKLHTFN--ITSI 94
           A+  ++ A +KGW   W+ET+SK  ++AF     +PW+++ RW N     H+ N  +T I
Sbjct: 126 AMFALEMANSKGWSCFWLETNSKLVELAFSNTSLVPWSLRNRWLNRFALTHSMNFLVTYI 185

Query: 93  WREANFSADAPSKAGAALN 37
           +RE N  AD+ +  G +L+
Sbjct: 186 FREGNSCADSLANIGLSLS 204


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