BLASTX nr result

ID: Coptis24_contig00021626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021626
         (1013 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531702.1| histidine kinase 1, 2, 3 plant, putative [Ri...   457   e-126
emb|CAN76309.1| hypothetical protein VITISV_028333 [Vitis vinifera]   446   e-123
ref|XP_002269977.2| PREDICTED: histidine kinase 2-like [Vitis vi...   442   e-122
ref|XP_002321181.1| histidine kinase cytokinin receptor [Populus...   436   e-120
ref|XP_003545073.1| PREDICTED: histidine kinase 2-like [Glycine ...   419   e-115

>ref|XP_002531702.1| histidine kinase 1, 2, 3 plant, putative [Ricinus communis]
            gi|223528678|gb|EEF30693.1| histidine kinase 1, 2, 3
            plant, putative [Ricinus communis]
          Length = 922

 Score =  457 bits (1175), Expect = e-126
 Identities = 240/335 (71%), Positives = 275/335 (82%), Gaps = 1/335 (0%)
 Frame = -1

Query: 1013 VLGMLQMLMDTDLNANQLDFAQTAHSSGKDLISLINEVLDQAKIESGRLELETVQFDPRT 834
            VLGMLQMLMDTDL+ANQ+DFAQTAH+SGKDLISLINEVLDQAKIESGRLELE V FD R+
Sbjct: 337  VLGMLQMLMDTDLDANQMDFAQTAHASGKDLISLINEVLDQAKIESGRLELEAVSFDLRS 396

Query: 833  VLDNVLSLFSSKAHDKGIELAVYISGLVPEVVIGDPGRFRQIITNLVGNSIKFT-EEGHI 657
            VLDN+LSLFS K+++KGIELA+Y+S  VPEVVIGDPGRFRQIITNLVGNS+KFT ++GHI
Sbjct: 397  VLDNILSLFSGKSNEKGIELAIYVSSQVPEVVIGDPGRFRQIITNLVGNSVKFTRDKGHI 456

Query: 656  LVSVHLADEVRSPLKVKDEMLKQEMELLWNGVHTSYNTLSGLPVVDRWKSWQSFQMLIGG 477
             VSVHLADEVRS L V+D +LKQ + L+ +  +   NTLSG PVVDRWKSW +F+ L   
Sbjct: 457  FVSVHLADEVRSTLNVRDAVLKQGLNLVQDMQNEIDNTLSGCPVVDRWKSWANFKRLNSK 516

Query: 476  YRNEVSEMVGMLVTVEDTGVGIPRDAQSRIFMPFMQADSSTSRTYGGTGIGLSISKCLVD 297
               E SEM+ +LVTVEDTGVGIP DA SRIF PFMQADSSTSRTYGGTGIGLSISKCLVD
Sbjct: 517  DTMEESEMIRLLVTVEDTGVGIPLDAHSRIFSPFMQADSSTSRTYGGTGIGLSISKCLVD 576

Query: 296  MMGGEIGFVSEPGTGSTFSFAVAFRIGETDSVNTKQYRIQSPVPKFCGFRALVVDGKSIR 117
            +MGGEIGFVSEPGTGSTFSF  +FR G+  S++TK         +  G+RALV+D +SIR
Sbjct: 577  LMGGEIGFVSEPGTGSTFSFTASFRKGDLRSLDTKWQPYDPTGLELQGWRALVIDKRSIR 636

Query: 116  AEVTKYHLQRLGIDVDIAISLTPICSHVSNVYHTS 12
            AEVT+YHLQRLGI  D+A SL   CS+ S   HTS
Sbjct: 637  AEVTRYHLQRLGITADMASSLKSACSYQSGGRHTS 671


>emb|CAN76309.1| hypothetical protein VITISV_028333 [Vitis vinifera]
          Length = 1400

 Score =  446 bits (1146), Expect = e-123
 Identities = 234/330 (70%), Positives = 269/330 (81%), Gaps = 1/330 (0%)
 Frame = -1

Query: 1013 VLGMLQMLMDTDLNANQLDFAQTAHSSGKDLISLINEVLDQAKIESGRLELETVQFDPRT 834
            VLGML+MLMD+ L+ANQ D+A+TAH+SGKDLISLINEVLDQAKIESGRLELE V FD R 
Sbjct: 726  VLGMLKMLMDSGLDANQQDYAETAHASGKDLISLINEVLDQAKIESGRLELEAVPFDLRA 785

Query: 833  VLDNVLSLFSSKAHDKGIELAVYISGLVPEVVIGDPGRFRQIITNLVGNSIKFT-EEGHI 657
             LDNVLSLFS K+H+KGIELAVYIS  VPE VIGDPGRFRQIITNLVGNSIKFT ++GHI
Sbjct: 786  ALDNVLSLFSGKSHEKGIELAVYISDQVPEFVIGDPGRFRQIITNLVGNSIKFTHDKGHI 845

Query: 656  LVSVHLADEVRSPLKVKDEMLKQEMELLWNGVHTSYNTLSGLPVVDRWKSWQSFQMLIGG 477
             VSVHLADEV  P  ++DE+L+Q + ++ +  + SYNTLSG PVV+RWKSW+ F+ L   
Sbjct: 846  FVSVHLADEVVGPPDLRDEVLRQSLNIVHDSSNNSYNTLSGFPVVNRWKSWEKFKKLXCT 905

Query: 476  YRNEVSEMVGMLVTVEDTGVGIPRDAQSRIFMPFMQADSSTSRTYGGTGIGLSISKCLVD 297
               E + ++ +LVTVEDTGVGIP +AQSRIFMPFMQADSSTSRTYGGTGIGLSISK LVD
Sbjct: 906  DSMEETSIIKLLVTVEDTGVGIPSEAQSRIFMPFMQADSSTSRTYGGTGIGLSISKRLVD 965

Query: 296  MMGGEIGFVSEPGTGSTFSFAVAFRIGETDSVNTKQYRIQSPVPKFCGFRALVVDGKSIR 117
            +MGGEIGF SEPGTGSTFSF VAF  GET  ++TKQ        +F G RALVVD +SIR
Sbjct: 966  LMGGEIGFESEPGTGSTFSFTVAFTKGETSLLDTKQQPHDPAGSEFQGLRALVVDCRSIR 1025

Query: 116  AEVTKYHLQRLGIDVDIAISLTPICSHVSN 27
            AEVT+YHLQRLGI VD   SL   CS++SN
Sbjct: 1026 AEVTRYHLQRLGISVDKTFSLISACSYLSN 1055


>ref|XP_002269977.2| PREDICTED: histidine kinase 2-like [Vitis vinifera]
          Length = 1272

 Score =  442 bits (1137), Expect = e-122
 Identities = 233/330 (70%), Positives = 268/330 (81%), Gaps = 1/330 (0%)
 Frame = -1

Query: 1013 VLGMLQMLMDTDLNANQLDFAQTAHSSGKDLISLINEVLDQAKIESGRLELETVQFDPRT 834
            VLGML+MLMD+ L+ANQ D+A+TAH+SGKDLISLINEVLDQAKIESGRLELE V FD R 
Sbjct: 687  VLGMLKMLMDSGLDANQQDYAETAHASGKDLISLINEVLDQAKIESGRLELEAVPFDLRA 746

Query: 833  VLDNVLSLFSSKAHDKGIELAVYISGLVPEVVIGDPGRFRQIITNLVGNSIKFT-EEGHI 657
             LDNVLSLFS K+H+KGIELAVYIS  VPE VIGDPGRFRQIITNLVGNSIKFT ++GHI
Sbjct: 747  ALDNVLSLFSGKSHEKGIELAVYISDQVPEFVIGDPGRFRQIITNLVGNSIKFTHDKGHI 806

Query: 656  LVSVHLADEVRSPLKVKDEMLKQEMELLWNGVHTSYNTLSGLPVVDRWKSWQSFQMLIGG 477
             VSVHLADEV  P  ++DE+L+Q + ++ +  + SYNTLSG PVV+RWKSW+ F+ L   
Sbjct: 807  FVSVHLADEVVGPPDLRDEVLRQSLNIVHDSSNNSYNTLSGFPVVNRWKSWEKFKKLSCT 866

Query: 476  YRNEVSEMVGMLVTVEDTGVGIPRDAQSRIFMPFMQADSSTSRTYGGTGIGLSISKCLVD 297
               E + ++ +LVTVEDTGVGIP +AQSRIFMPFMQADSSTSRTYGGTGIGLSISK LVD
Sbjct: 867  DSMEETSIIKLLVTVEDTGVGIPSEAQSRIFMPFMQADSSTSRTYGGTGIGLSISKRLVD 926

Query: 296  MMGGEIGFVSEPGTGSTFSFAVAFRIGETDSVNTKQYRIQSPVPKFCGFRALVVDGKSIR 117
            +MGGEIGF SEPGTGSTFSF VAF  GET  ++TKQ        +F   RALVVD +SIR
Sbjct: 927  LMGGEIGFESEPGTGSTFSFTVAFTKGETSLLDTKQQPHDPAGSEFQELRALVVDCRSIR 986

Query: 116  AEVTKYHLQRLGIDVDIAISLTPICSHVSN 27
            AEVT+YHLQRLGI VD   SL   CS++SN
Sbjct: 987  AEVTRYHLQRLGISVDKTFSLISACSYLSN 1016


>ref|XP_002321181.1| histidine kinase cytokinin receptor [Populus trichocarpa]
            gi|222861954|gb|EEE99496.1| histidine kinase cytokinin
            receptor [Populus trichocarpa]
          Length = 1234

 Score =  436 bits (1120), Expect = e-120
 Identities = 230/336 (68%), Positives = 272/336 (80%), Gaps = 2/336 (0%)
 Frame = -1

Query: 1013 VLGMLQMLMDTDLNANQLDFAQTAHSSGKDLISLINEVLDQAKIESGRLELETVQFDPRT 834
            VLGMLQMLM+TDL+ NQ+D+A TAH+SGKDLI+LINEVLDQAKIESGRLELE V FD R+
Sbjct: 651  VLGMLQMLMETDLDVNQMDYANTAHTSGKDLIALINEVLDQAKIESGRLELEAVPFDLRS 710

Query: 833  VLDNVLSLFSSKAHDKGIE-LAVYISGLVPEVVIGDPGRFRQIITNLVGNSIKFT-EEGH 660
            VLDNVLSLFS K+++KGIE LAVY+S  +PEVVIGDPGRFRQIITNLVGNSIKFT ++GH
Sbjct: 711  VLDNVLSLFSGKSNEKGIEKLAVYVSDRLPEVVIGDPGRFRQIITNLVGNSIKFTRDKGH 770

Query: 659  ILVSVHLADEVRSPLKVKDEMLKQEMELLWNGVHTSYNTLSGLPVVDRWKSWQSFQMLIG 480
            + VSVHLADEVRSPL  +D +LKQ +EL+ +     Y++LSG PVV+RWKSW+ F+    
Sbjct: 771  VFVSVHLADEVRSPLDARDAVLKQGLELVQDTSSKVYDSLSGFPVVNRWKSWEKFKKSSC 830

Query: 479  GYRNEVSEMVGMLVTVEDTGVGIPRDAQSRIFMPFMQADSSTSRTYGGTGIGLSISKCLV 300
                +  EM+ +LVTVEDTGVGIP DAQ  IF PFMQADSSTSR YGGTGIGLSISKCLV
Sbjct: 831  IDSRDEPEMIRLLVTVEDTGVGIPEDAQGNIFTPFMQADSSTSRKYGGTGIGLSISKCLV 890

Query: 299  DMMGGEIGFVSEPGTGSTFSFAVAFRIGETDSVNTKQYRIQSPVPKFCGFRALVVDGKSI 120
            D+MGGEIGFVSE G GSTFSF V+FR GE+ S++TK       V +  G RALV+D +S+
Sbjct: 891  DLMGGEIGFVSECGIGSTFSFIVSFRKGESTSLDTKWQPYDPAVLEVRGGRALVIDERSV 950

Query: 119  RAEVTKYHLQRLGIDVDIAISLTPICSHVSNVYHTS 12
            RAEVTKYHLQRLGI  D+A SL   C+++S+ Y TS
Sbjct: 951  RAEVTKYHLQRLGITADVAPSLKSACAYLSSGYCTS 986


>ref|XP_003545073.1| PREDICTED: histidine kinase 2-like [Glycine max]
          Length = 1225

 Score =  419 bits (1076), Expect = e-115
 Identities = 220/335 (65%), Positives = 267/335 (79%), Gaps = 1/335 (0%)
 Frame = -1

Query: 1013 VLGMLQMLMDTDLNANQLDFAQTAHSSGKDLISLINEVLDQAKIESGRLELETVQFDPRT 834
            VLGMLQMLMDT+L+ NQ+D AQTAH SGKDLIS+I+EVLDQAKIE+G+LELE V FDPR 
Sbjct: 646  VLGMLQMLMDTELDENQMDCAQTAHKSGKDLISVISEVLDQAKIEAGKLELEAVAFDPRA 705

Query: 833  VLDNVLSLFSSKAHDKGIELAVYISGLVPEVVIGDPGRFRQIITNLVGNSIKFT-EEGHI 657
            +LD +LSLFS K+++KGIELAVY S  VP+VVIGDP RFRQIITNLVGNS+KFT ++GH+
Sbjct: 706  ILDEILSLFSEKSNEKGIELAVYASNQVPKVVIGDPKRFRQIITNLVGNSLKFTHDKGHV 765

Query: 656  LVSVHLADEVRSPLKVKDEMLKQEMELLWNGVHTSYNTLSGLPVVDRWKSWQSFQMLIGG 477
             VSVHLA+EV++PL + D +L++ + L  +  + +Y+TLSG PV +RWKSW +F+ L G 
Sbjct: 766  FVSVHLANEVKNPLHIMDAVLREGLNLNQDISNRTYDTLSGFPVCNRWKSWANFKQLSG- 824

Query: 476  YRNEVSEMVGMLVTVEDTGVGIPRDAQSRIFMPFMQADSSTSRTYGGTGIGLSISKCLVD 297
              NE  E++ +LV VEDTG+GIP DAQSRIF PFMQADSSTSRTYGGTGIGLSISKCLVD
Sbjct: 825  -INE-PEIIQLLVIVEDTGIGIPTDAQSRIFTPFMQADSSTSRTYGGTGIGLSISKCLVD 882

Query: 296  MMGGEIGFVSEPGTGSTFSFAVAFRIGETDSVNTKQYRIQSPVPKFCGFRALVVDGKSIR 117
            +MGGEIGFVSEPG GSTFSF   FR GE+ S++  Q        +F G R LVVD + IR
Sbjct: 883  LMGGEIGFVSEPGIGSTFSFTGTFRKGESTSLDAMQQNNHFG-SEFQGLRTLVVDSRKIR 941

Query: 116  AEVTKYHLQRLGIDVDIAISLTPICSHVSNVYHTS 12
            AEVT+YHLQRLG+ VD+  SL   CS +SNV + S
Sbjct: 942  AEVTRYHLQRLGMSVDVTYSLNSACSCLSNVCNKS 976


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