BLASTX nr result

ID: Coptis24_contig00021622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021622
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270403.1| PREDICTED: armadillo repeat-containing prote...   161   6e-38
ref|XP_003616184.1| Armadillo repeat-containing protein [Medicag...   157   1e-36
ref|XP_002298151.1| predicted protein [Populus trichocarpa] gi|2...   155   4e-36
ref|NP_198545.1| armadillo/beta-catenin-like repeat-containing p...   154   9e-36
ref|XP_003557387.1| PREDICTED: armadillo repeat-containing prote...   154   9e-36

>ref|XP_002270403.1| PREDICTED: armadillo repeat-containing protein 7 [Vitis vinifera]
           gi|297738150|emb|CBI27351.3| unnamed protein product
           [Vitis vinifera]
          Length = 177

 Score =  161 bits (407), Expect = 6e-38
 Identities = 75/91 (82%), Positives = 84/91 (92%)
 Frame = -1

Query: 277 MFTNEKRQIERTGRYGTLRVQYLQELVSEFQNTTSEESKERVVAHLANFAYDPYNFSFLR 98
           MFTN++RQ ERTGRYGT RVQYLQELVS+FQN T+EE+KER+ A+LANFAYDPYN++FLR
Sbjct: 1   MFTNKRRQEERTGRYGTPRVQYLQELVSQFQNATNEETKERIAANLANFAYDPYNYNFLR 60

Query: 97  QLNVLELFLDCITEPNEKLVEFSAGGICNCC 5
           QLNVLELFLDCITEPNEKLVEF  GGICN C
Sbjct: 61  QLNVLELFLDCITEPNEKLVEFGVGGICNSC 91


>ref|XP_003616184.1| Armadillo repeat-containing protein [Medicago truncatula]
           gi|355517519|gb|AES99142.1| Armadillo repeat-containing
           protein [Medicago truncatula]
           gi|388504388|gb|AFK40260.1| unknown [Medicago
           truncatula]
          Length = 178

 Score =  157 bits (396), Expect = 1e-36
 Identities = 69/92 (75%), Positives = 85/92 (92%)
 Frame = -1

Query: 277 MFTNEKRQIERTGRYGTLRVQYLQELVSEFQNTTSEESKERVVAHLANFAYDPYNFSFLR 98
           MFTN +RQ+ERTGRYGT R+QYLQELV++FQN++ +E KE+++A+LANFAYDPYNF+FLR
Sbjct: 1   MFTNNQRQLERTGRYGTSRLQYLQELVTQFQNSSEDEIKEKILANLANFAYDPYNFNFLR 60

Query: 97  QLNVLELFLDCITEPNEKLVEFSAGGICNCCV 2
           QLNVLELFLDC+TEPNEK++EF  GGICN CV
Sbjct: 61  QLNVLELFLDCVTEPNEKIIEFGVGGICNSCV 92


>ref|XP_002298151.1| predicted protein [Populus trichocarpa] gi|222845409|gb|EEE82956.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  155 bits (391), Expect = 4e-36
 Identities = 72/91 (79%), Positives = 81/91 (89%)
 Frame = -1

Query: 277 MFTNEKRQIERTGRYGTLRVQYLQELVSEFQNTTSEESKERVVAHLANFAYDPYNFSFLR 98
           MFTN +RQ ERTG+YGT R+QYLQELV++FQN   EE KER+VA+LANFAYDPYN++FLR
Sbjct: 1   MFTNNQRQEERTGKYGTPRLQYLQELVNQFQNAADEERKERIVANLANFAYDPYNYTFLR 60

Query: 97  QLNVLELFLDCITEPNEKLVEFSAGGICNCC 5
           QLNVLELFLDCITEPNEKLVEF  GGICN C
Sbjct: 61  QLNVLELFLDCITEPNEKLVEFGIGGICNSC 91


>ref|NP_198545.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis
           thaliana] gi|9758715|dbj|BAB09101.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|98960935|gb|ABF58951.1| At5g37290 [Arabidopsis
           thaliana] gi|332006778|gb|AED94161.1|
           armadillo/beta-catenin-like repeat-containing protein
           [Arabidopsis thaliana]
          Length = 180

 Score =  154 bits (388), Expect = 9e-36
 Identities = 71/91 (78%), Positives = 82/91 (90%)
 Frame = -1

Query: 277 MFTNEKRQIERTGRYGTLRVQYLQELVSEFQNTTSEESKERVVAHLANFAYDPYNFSFLR 98
           MFTN +RQ ERTG++GT R+QYLQELVS+FQN T EE+KER+VA+LANFAYDPYN++ LR
Sbjct: 1   MFTNNQRQEERTGKHGTPRLQYLQELVSQFQNATDEETKERIVANLANFAYDPYNYTILR 60

Query: 97  QLNVLELFLDCITEPNEKLVEFSAGGICNCC 5
           QLNVLELF+DCITEPNEKLVEF  GGICN C
Sbjct: 61  QLNVLELFVDCITEPNEKLVEFGIGGICNAC 91


>ref|XP_003557387.1| PREDICTED: armadillo repeat-containing protein 7-like [Brachypodium
           distachyon]
          Length = 176

 Score =  154 bits (388), Expect = 9e-36
 Identities = 70/92 (76%), Positives = 84/92 (91%)
 Frame = -1

Query: 277 MFTNEKRQIERTGRYGTLRVQYLQELVSEFQNTTSEESKERVVAHLANFAYDPYNFSFLR 98
           MFTN +RQ+ERTGR GT R QYLQ+LV++FQ++T EESKER+VA+LANFAYDPYN++F+R
Sbjct: 1   MFTNAQRQVERTGRGGTPREQYLQDLVTQFQDSTDEESKERIVANLANFAYDPYNYAFMR 60

Query: 97  QLNVLELFLDCITEPNEKLVEFSAGGICNCCV 2
           QLN+LELFLDCITEPNE+LVEF  GGICN CV
Sbjct: 61  QLNILELFLDCITEPNERLVEFGVGGICNSCV 92


Top