BLASTX nr result

ID: Coptis24_contig00021621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021621
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554421.1| PREDICTED: ABC transporter G family member 3...   179   3e-43
ref|XP_002267050.2| PREDICTED: pleiotropic drug resistance prote...   176   2e-42
ref|XP_003625775.1| Pleiotropic drug resistance ABC transporter ...   176   2e-42
emb|CBI17066.3| unnamed protein product [Vitis vinifera]              176   2e-42
ref|XP_002529079.1| ATP-binding cassette transporter, putative [...   176   2e-42

>ref|XP_003554421.1| PREDICTED: ABC transporter G family member 39-like [Glycine max]
          Length = 1437

 Score =  179 bits (453), Expect = 3e-43
 Identities = 88/94 (93%), Positives = 93/94 (98%)
 Frame = +1

Query: 1   MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVKFMRQMVHIMD 180
           +VG+EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQI KFMRQMVH+MD
Sbjct: 328 VVGDEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQICKFMRQMVHVMD 387

Query: 181 VTMIISLLQPAPETFELFDDVILLSEGQIVYQGP 282
           VTM+ISLLQPAPETFELFDD+ILLSEGQIVYQGP
Sbjct: 388 VTMVISLLQPAPETFELFDDIILLSEGQIVYQGP 421



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
 Frame = +1

Query: 25   GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVKFMRQMVHIMDVTMIISLL 204
            G+S  Q+KR+T    LV     +FMDE ++GLD+     +++ +R  V     T++ ++ 
Sbjct: 987  GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIH 1045

Query: 205  QPAPETFELFDDVILLSE-GQIVYQGP 282
            QP+ + FE FD+++L+   GQ++Y GP
Sbjct: 1046 QPSIDIFEAFDEILLMKRGGQVIYAGP 1072


>ref|XP_002267050.2| PREDICTED: pleiotropic drug resistance protein 2-like [Vitis
           vinifera]
          Length = 1444

 Score =  176 bits (445), Expect = 2e-42
 Identities = 85/94 (90%), Positives = 93/94 (98%)
 Frame = +1

Query: 1   MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVKFMRQMVHIMD 180
           MVG+EMRRGISGGQKKRVTTGEMLVGPAKA FMDEISTGLDSSTTFQIVKFM+QMVHIMD
Sbjct: 329 MVGDEMRRGISGGQKKRVTTGEMLVGPAKAFFMDEISTGLDSSTTFQIVKFMKQMVHIMD 388

Query: 181 VTMIISLLQPAPETFELFDDVILLSEGQIVYQGP 282
           +TM+ISLLQPAPET++LFDD+ILLSEG+IVYQGP
Sbjct: 389 ITMVISLLQPAPETYDLFDDIILLSEGKIVYQGP 422



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
 Frame = +1

Query: 25   GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVKFMRQMVHIMDVTMIISLL 204
            G+S  Q+KR+T    LV     +FMDE ++GLD+     +++ +R  V     T++ ++ 
Sbjct: 994  GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIH 1052

Query: 205  QPAPETFELFDDVILLSE-GQIVYQGP 282
            QP+ + FE FD+++L+   GQ++Y GP
Sbjct: 1053 QPSIDIFEAFDELLLMKRGGQVIYAGP 1079


>ref|XP_003625775.1| Pleiotropic drug resistance ABC transporter family protein
           [Medicago truncatula] gi|355500790|gb|AES81993.1|
           Pleiotropic drug resistance ABC transporter family
           protein [Medicago truncatula]
          Length = 1461

 Score =  176 bits (445), Expect = 2e-42
 Identities = 87/94 (92%), Positives = 92/94 (97%)
 Frame = +1

Query: 1   MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVKFMRQMVHIMD 180
           MVG+EMRRGISGGQKKRVT GEMLVGPA+ALFMDEISTGLDSSTTFQI KFMRQMVHIMD
Sbjct: 332 MVGDEMRRGISGGQKKRVTAGEMLVGPAQALFMDEISTGLDSSTTFQICKFMRQMVHIMD 391

Query: 181 VTMIISLLQPAPETFELFDDVILLSEGQIVYQGP 282
           VT++ISLLQPAPETFELFDD+ILLSEGQIVYQGP
Sbjct: 392 VTVVISLLQPAPETFELFDDIILLSEGQIVYQGP 425


>emb|CBI17066.3| unnamed protein product [Vitis vinifera]
          Length = 1388

 Score =  176 bits (445), Expect = 2e-42
 Identities = 85/94 (90%), Positives = 93/94 (98%)
 Frame = +1

Query: 1   MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVKFMRQMVHIMD 180
           MVG+EMRRGISGGQKKRVTTGEMLVGPAKA FMDEISTGLDSSTTFQIVKFM+QMVHIMD
Sbjct: 364 MVGDEMRRGISGGQKKRVTTGEMLVGPAKAFFMDEISTGLDSSTTFQIVKFMKQMVHIMD 423

Query: 181 VTMIISLLQPAPETFELFDDVILLSEGQIVYQGP 282
           +TM+ISLLQPAPET++LFDD+ILLSEG+IVYQGP
Sbjct: 424 ITMVISLLQPAPETYDLFDDIILLSEGKIVYQGP 457



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
 Frame = +1

Query: 25   GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVKFMRQMVHIMDVTMIISLL 204
            G+S  Q+KR+T    LV     +FMDE ++GLD+     +++ +R  V     T++ ++ 
Sbjct: 938  GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIH 996

Query: 205  QPAPETFELFDDVILLSE-GQIVYQGP 282
            QP+ + FE FD+++L+   GQ++Y GP
Sbjct: 997  QPSIDIFEAFDELLLMKRGGQVIYAGP 1023


>ref|XP_002529079.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223531491|gb|EEF33323.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1446

 Score =  176 bits (445), Expect = 2e-42
 Identities = 88/94 (93%), Positives = 92/94 (97%)
 Frame = +1

Query: 1   MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVKFMRQMVHIMD 180
           MVG++MRRGISGGQKKRVTTGEMLVGPAKA FMDEISTGLDSSTTFQIVK+MRQMVHI D
Sbjct: 334 MVGDDMRRGISGGQKKRVTTGEMLVGPAKAFFMDEISTGLDSSTTFQIVKYMRQMVHIND 393

Query: 181 VTMIISLLQPAPETFELFDDVILLSEGQIVYQGP 282
           VTMIISLLQPAPETF+LFDDVILLSEGQIVYQGP
Sbjct: 394 VTMIISLLQPAPETFDLFDDVILLSEGQIVYQGP 427



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
 Frame = +1

Query: 25   GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVKFMRQMVHIMDVTMIISLL 204
            G+S  Q+KR+T    LV     +FMDE ++GLD+     +++ +R  V     T++ ++ 
Sbjct: 996  GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIH 1054

Query: 205  QPAPETFELFDDVILLSE-GQIVYQGP 282
            QP+ + FE FD+++L+   GQ++Y GP
Sbjct: 1055 QPSIDIFEAFDELLLMKRGGQVIYAGP 1081


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