BLASTX nr result

ID: Coptis24_contig00021619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021619
         (1581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276243.1| PREDICTED: uncharacterized protein At2g39910...   489   e-136
ref|XP_002312138.1| predicted protein [Populus trichocarpa] gi|2...   438   e-120
ref|XP_004167858.1| PREDICTED: uncharacterized protein At2g39910...   428   e-117
ref|XP_004150232.1| PREDICTED: uncharacterized protein At2g39910...   426   e-117
ref|XP_002879832.1| expressed protein [Arabidopsis lyrata subsp....   425   e-116

>ref|XP_002276243.1| PREDICTED: uncharacterized protein At2g39910 [Vitis vinifera]
            gi|296086104|emb|CBI31545.3| unnamed protein product
            [Vitis vinifera]
          Length = 446

 Score =  489 bits (1260), Expect = e-136
 Identities = 250/442 (56%), Positives = 307/442 (69%), Gaps = 32/442 (7%)
 Frame = -1

Query: 1575 TSLRGELVRISEPVRELISKTKYKIPEGTNVSVKTMVESLLPNEN-----------VEKE 1429
            ++L   L+R+SE ++E +SK +Y   EGTNVSVK+M+ESLLP +             E +
Sbjct: 6    STLHDNLIRLSETIQESLSKAQYNPEEGTNVSVKSMLESLLPRKTSISNRTEGRRITEDQ 65

Query: 1428 IKTEIVDFSLCCAALASVLDEKNETLLSWVPKQLSVVGKHAFEDXXXXXXXXXXXXXXXX 1249
            I+ EI DFSLCCAALAS     N   LSW+PK LSV    AFE+                
Sbjct: 66   IECEIKDFSLCCAALASA-QGSNHASLSWIPKDLSVTAVSAFEELAKAFSANLNAGKSTR 124

Query: 1248 L---------------------PQVVKLFKERIKESSIDSKDEDNEISAASARTPVGYAI 1132
            +                     P V+ L K  IKESSI+  D+ +E+SAASAR P+ YA+
Sbjct: 125  IVELGVDCSLVSDDKKLVVELIPLVMPLLKASIKESSINHLDDCDEVSAASARAPLAYAV 184

Query: 1131 VAAHQFRWFVTQVGFPELGKLCSLVIPCALTTLDHWSPAVKGQGMISFIHLAKNVNAAEL 952
            VAA+Q RWFVTQV  P LGKLCSLVIPCALT LDHWSP VKGQGMISFIHL KNV A E 
Sbjct: 185  VAAYQLRWFVTQVEQPHLGKLCSLVIPCALTALDHWSPEVKGQGMISFIHLGKNVKATEF 244

Query: 951  GWYEDVILDICCRNIACDDMLWHHVVEMSVLVLTSTQQKNPRSSWFEKIMNEMLSHLERQ 772
             WYEDVILD CC+NIA  D +WH VVEMSVL++T     NPRSSW+E+I+NEML+HLERQ
Sbjct: 245  SWYEDVILDTCCQNIASSDEIWHLVVEMSVLLVTCIHGSNPRSSWYERILNEMLNHLERQ 304

Query: 771  PRDKERYIIWLELIEPVFSAMGLVLLAHFRRIFPLLFQWMHKDDDKTILLVLQRILTITK 592
            P++K+RY  WL+ IEP+FS++GLVLLAHFRRIFPL FQWMH D+D+T+LLVL+R+ T+TK
Sbjct: 305  PKNKDRYTPWLQHIEPLFSSVGLVLLAHFRRIFPLFFQWMHSDNDQTLLLVLKRVYTVTK 364

Query: 591  LTWIRNSPYIERLVDELIITYKXXXXXXXXXEIRKDVLQILILLHKCKGLQFEATWNKYK 412
            LTWIRN+PY+ERLVDEL +TYK         EIR  V+Q+LILL +CKGLQFEA WNK++
Sbjct: 365  LTWIRNTPYVERLVDELAVTYKEAALRRAREEIRTHVIQMLILLQQCKGLQFEAAWNKHR 424

Query: 411  DDPNLSAIAPSLCSEKMAMVAE 346
            DDPNL+ + PS  +   AMV +
Sbjct: 425  DDPNLTTLGPSFNTRNAAMVVQ 446


>ref|XP_002312138.1| predicted protein [Populus trichocarpa] gi|222851958|gb|EEE89505.1|
            predicted protein [Populus trichocarpa]
          Length = 412

 Score =  438 bits (1127), Expect = e-120
 Identities = 224/413 (54%), Positives = 286/413 (69%), Gaps = 24/413 (5%)
 Frame = -1

Query: 1551 RISEPVRELISKTKYKIPEGTNVSVKTMVESLL--------PNENV--EKEIKTEIVDFS 1402
            R+SE +   +S+  Y  PEGT +S K+ +ESLL        PN N   E ++   I DF+
Sbjct: 1    RLSETILNPLSQIPYTPPEGTPISPKSTLESLLSIKNSNPNPNNNAITETQLFNSIKDFT 60

Query: 1401 LCCAALASVLDEKNETLLSWVPKQLSVVGKHAFEDXXXXXXXXXXXXXXXXL-------- 1246
            L CA L+S     +E LLSW+PK L++    AF +                         
Sbjct: 61   LACALLSSSQSSTHE-LLSWIPKNLAIEANSAFNELSNAYAESDLGARNERRISELLGKR 119

Query: 1245 ------PQVVKLFKERIKESSIDSKDEDNEISAASARTPVGYAIVAAHQFRWFVTQVGFP 1084
                  P+V+ L K+ IKESSID   + +EISAASAR PVG AIVAA+QFRWFVTQV +P
Sbjct: 120  LVIELMPEVLPLLKDGIKESSIDKSADGDEISAASARAPVGSAIVAAYQFRWFVTQVDYP 179

Query: 1083 ELGKLCSLVIPCALTTLDHWSPAVKGQGMISFIHLAKNVNAAELGWYEDVILDICCRNIA 904
             LGKLC+ VIPCALT LDHWSP VKGQGMISF HLAKNVNAAEL  YEDVILD CC+NIA
Sbjct: 180  HLGKLCNFVIPCALTALDHWSPQVKGQGMISFTHLAKNVNAAELSRYEDVILDACCQNIA 239

Query: 903  CDDMLWHHVVEMSVLVLTSTQQKNPRSSWFEKIMNEMLSHLERQPRDKERYIIWLELIEP 724
             DD +W HVVEMSVL++T  Q+ +PRS WFEK++NEML HLERQPR+K+R + WL+ +EP
Sbjct: 240  SDDEIWCHVVEMSVLLVTCIQRSDPRSPWFEKMLNEMLGHLERQPRNKDRRVAWLKFVEP 299

Query: 723  VFSAMGLVLLAHFRRIFPLLFQWMHKDDDKTILLVLQRILTITKLTWIRNSPYIERLVDE 544
            +   +GLVL+AHF RIFPL F+W+H DDD+T+LLVL+R+ T+ +LTWIRN+PY+ERLVDE
Sbjct: 300  LLHGIGLVLVAHFSRIFPLFFKWLHADDDETVLLVLKRVHTVMRLTWIRNTPYLERLVDE 359

Query: 543  LIITYKXXXXXXXXXEIRKDVLQILILLHKCKGLQFEATWNKYKDDPNLSAIA 385
            L + YK         +IR  VL+ILILL +CKGLQF+A W+K+ +D NL++++
Sbjct: 360  LALLYKEAALRVAREQIRSSVLEILILLQQCKGLQFKAAWDKHSNDLNLTSLS 412


>ref|XP_004167858.1| PREDICTED: uncharacterized protein At2g39910-like [Cucumis sativus]
          Length = 442

 Score =  428 bits (1101), Expect = e-117
 Identities = 222/420 (52%), Positives = 283/420 (67%), Gaps = 27/420 (6%)
 Frame = -1

Query: 1554 VRISEPVRELISKTKYKIPEGTNVSVKTMVESLLPNENV------EKEIKTEIVDFSLCC 1393
            ++ SEP+ + +S    K  EG+NVSVK ++ESLLP +        E +I + I DF+L C
Sbjct: 13   IQFSEPIIKSLSNICDKPSEGSNVSVKPILESLLPRKTSLRISPSEDDIYSSIKDFTLAC 72

Query: 1392 AALASVLDEKNETLLSWVPKQLSVVGKHAFE---------------------DXXXXXXX 1276
            A + S      + LLSW+ + L++  + AF                              
Sbjct: 73   ALILSSHSSTFD-LLSWITEDLALTAESAFRMLSKAYASASCDGFSKNIEELGLDFSLIP 131

Query: 1275 XXXXXXXXXLPQVVKLFKERIKESSIDSKDEDNEISAASARTPVGYAIVAAHQFRWFVTQ 1096
                     +P+V+ L K+ IKESSID  DE +E+SAASAR PVG+AIVAAHQ RWF+TQ
Sbjct: 132  EEKRLVVEIIPKVLPLLKDSIKESSIDKSDEVDEVSAASARVPVGFAIVAAHQLRWFITQ 191

Query: 1095 VGFPELGKLCSLVIPCALTTLDHWSPAVKGQGMISFIHLAKNVNAAELGWYEDVILDICC 916
            + +P LGKLC+LVIPC LT LDHWSP VKGQGM+SFIHLAKNVNAAELGWYEDVILD CC
Sbjct: 192  IDYPHLGKLCNLVIPCGLTALDHWSPEVKGQGMLSFIHLAKNVNAAELGWYEDVILDACC 251

Query: 915  RNIACDDMLWHHVVEMSVLVLTSTQQKNPRSSWFEKIMNEMLSHLERQPRDKERYIIWLE 736
             N+   D +W +VVEMSVL+ TS    NPRSSW E+++NEML HLERQPR+KER I WL+
Sbjct: 252  SNVPSSDEIWPYVVEMSVLLATSIHNMNPRSSWIERMVNEMLGHLERQPRNKERCIAWLQ 311

Query: 735  LIEPVFSAMGLVLLAHFRRIFPLLFQWMHKDDDKTILLVLQRILTITKLTWIRNSPYIER 556
             IEP+F+ MGLVLLAH RRIFPL F+WM+ +DD+T LLVLQRI T+ +LTWIRN+PY+ER
Sbjct: 312  HIEPLFNCMGLVLLAHTRRIFPLFFKWMNAEDDETTLLVLQRIQTVVRLTWIRNTPYVER 371

Query: 555  LVDELIITYKXXXXXXXXXEIRKDVLQILILLHKCKGLQFEATWNKYKDDPNLSAIAPSL 376
            LVDEL + Y+          IRK V+  L+LL + KG QF+A W+K+KD  NL +++ SL
Sbjct: 372  LVDELAMLYEKAATRSSGDGIRKHVVDALMLLQESKGQQFKAAWSKHKDLQNLVSLSTSL 431


>ref|XP_004150232.1| PREDICTED: uncharacterized protein At2g39910-like [Cucumis sativus]
          Length = 442

 Score =  426 bits (1095), Expect = e-117
 Identities = 223/422 (52%), Positives = 282/422 (66%), Gaps = 29/422 (6%)
 Frame = -1

Query: 1554 VRISEPVRELISKTKYKIPEGTNVSVKTMVESLLPNENV------EKEIKTEIVDFSLCC 1393
            +  SEP+ + +S    K  EG+NVSVK ++ESLLP +        E +I + I DF+L C
Sbjct: 13   IEFSEPIIKSLSNICDKPSEGSNVSVKPILESLLPRKTSLRISPSEDDIYSSIKDFTLAC 72

Query: 1392 AALASVLDEKNET--LLSWVPKQLSVVGKHAFE---------------------DXXXXX 1282
            A    +L  ++ T  LLSW+ + L++  + AF                            
Sbjct: 73   AL---ILSSRSSTFDLLSWITEDLALTAESAFRMLSKAYASASCDGFSKNIEELGLDFSL 129

Query: 1281 XXXXXXXXXXXLPQVVKLFKERIKESSIDSKDEDNEISAASARTPVGYAIVAAHQFRWFV 1102
                       +P+V+ L K+ IKESSID  DE +E+SAASAR PVG+AIVAAHQ RWF+
Sbjct: 130  IPEEKRLVVEIIPKVLPLLKDSIKESSIDKSDEVDEVSAASARVPVGFAIVAAHQLRWFI 189

Query: 1101 TQVGFPELGKLCSLVIPCALTTLDHWSPAVKGQGMISFIHLAKNVNAAELGWYEDVILDI 922
            TQ+ +P LGKLC+LVIPC LT LDHWSP VKGQGM+SFIHLAKNVNAAELGWYEDVILD 
Sbjct: 190  TQIDYPHLGKLCNLVIPCGLTALDHWSPEVKGQGMLSFIHLAKNVNAAELGWYEDVILDA 249

Query: 921  CCRNIACDDMLWHHVVEMSVLVLTSTQQKNPRSSWFEKIMNEMLSHLERQPRDKERYIIW 742
            CC N+   D +W  VVEMSVL+ TS    NPRSSW E+++NEML HLERQPR+KER I W
Sbjct: 250  CCSNVPSSDEIWPCVVEMSVLLATSIHNMNPRSSWIERMVNEMLGHLERQPRNKERCIAW 309

Query: 741  LELIEPVFSAMGLVLLAHFRRIFPLLFQWMHKDDDKTILLVLQRILTITKLTWIRNSPYI 562
            L+ IEP+F+ MGLVLLAH RRIFPL F+WM+ +DD+T LLVLQRI T+ +LTWIRN+PY+
Sbjct: 310  LQHIEPLFNCMGLVLLAHTRRIFPLFFKWMNAEDDETTLLVLQRIQTVVRLTWIRNTPYV 369

Query: 561  ERLVDELIITYKXXXXXXXXXEIRKDVLQILILLHKCKGLQFEATWNKYKDDPNLSAIAP 382
            ERLVDEL + Y+          IRK V+  L+LL + KG QF+A W+K+KD  NL  ++ 
Sbjct: 370  ERLVDELAMLYEKAATRRSGDAIRKHVVDALMLLQESKGQQFKAAWSKHKDLQNLVPLST 429

Query: 381  SL 376
            SL
Sbjct: 430  SL 431


>ref|XP_002879832.1| expressed protein [Arabidopsis lyrata subsp. lyrata]
            gi|297325671|gb|EFH56091.1| expressed protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 424

 Score =  425 bits (1092), Expect = e-116
 Identities = 213/413 (51%), Positives = 282/413 (68%), Gaps = 15/413 (3%)
 Frame = -1

Query: 1578 STSLRGELVRISEPVRELISKTKYKIPEGTNVSVKTMVESLLPNENVEKEIKTE-IVDFS 1402
            ++ L G+L+R+SEP+ E++ +T+Y   E + VS K ++ SLLPN +  +    E I   +
Sbjct: 5    NSDLHGQLLRLSEPIAEILRRTQYTPQESSKVSTKDILFSLLPNTSSSRLTNEESIKSLA 64

Query: 1401 LCCAALASVLDEKNETLLSWVPKQLSVVGKHAFEDXXXXXXXXXXXXXXXXL-------- 1246
            L CA LAS     +E LLSW+P  LSV+G+  F +                         
Sbjct: 65   LACALLASSRSSTHE-LLSWIPDNLSVMGESTFWEISRDCFSDFSSNSTAEKLVELVEDS 123

Query: 1245 ------PQVVKLFKERIKESSIDSKDEDNEISAASARTPVGYAIVAAHQFRWFVTQVGFP 1084
                  P V+   K+ I++SS+    +  ++SAA ARTPVGYAI+AAHQ RWFVTQV  P
Sbjct: 124  EKMEMLPIVLPELKDGIEKSSLGKGSDAEDVSAAMARTPVGYAILAAHQLRWFVTQVEKP 183

Query: 1083 ELGKLCSLVIPCALTTLDHWSPAVKGQGMISFIHLAKNVNAAELGWYEDVILDICCRNIA 904
             L K C+LV+PCALT LDHWSP VKGQGMI+F+HLAKNV++ +LG Y DV+LD CC+NIA
Sbjct: 184  NLVKFCNLVVPCALTALDHWSPEVKGQGMITFVHLAKNVSSGDLGLYGDVVLDACCQNIA 243

Query: 903  CDDMLWHHVVEMSVLVLTSTQQKNPRSSWFEKIMNEMLSHLERQPRDKERYIIWLELIEP 724
             DD +W HVVE+SVL++T     NPRS W+EKIMNEML HLERQPR+KER I WL  +EP
Sbjct: 244  SDDEIWIHVVELSVLLVTKIHPNNPRSPWYEKIMNEMLGHLERQPRNKERRITWLRFVEP 303

Query: 723  VFSAMGLVLLAHFRRIFPLLFQWMHKDDDKTILLVLQRILTITKLTWIRNSPYIERLVDE 544
            + +++GL LLAHFRRIFPL FQWMH DD +T+LLVL+R+ T+ +LTWIRNSP   RLVDE
Sbjct: 304  LLNSLGLFLLAHFRRIFPLFFQWMHSDDAETVLLVLERLETVLRLTWIRNSPVFPRLVDE 363

Query: 543  LIITYKXXXXXXXXXEIRKDVLQILILLHKCKGLQFEATWNKYKDDPNLSAIA 385
            L+  YK         +IR  +L+IL+LL +CKGLQFE+ W++Y++DPNLS ++
Sbjct: 364  LVSLYKESSMRKDRDDIRPLILRILMLLRQCKGLQFESAWSQYQEDPNLSTVS 416


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