BLASTX nr result

ID: Coptis24_contig00021605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021605
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522141.1| conserved hypothetical protein [Ricinus comm...    79   5e-13
ref|XP_002319925.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002319926.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
emb|CAN75021.1| hypothetical protein VITISV_026781 [Vitis vinifera]    72   6e-11
ref|XP_002283339.2| PREDICTED: UPF0481 protein At3g47200-like [V...    71   8e-11

>ref|XP_002522141.1| conserved hypothetical protein [Ricinus communis]
           gi|223538740|gb|EEF40341.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 415

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 44/115 (38%), Positives = 65/115 (56%)
 Frame = +2

Query: 5   DPILGTTWMVYSLRKDLVLLENQLPFVILEKLFYLTKDHSRRGRSLNELLTNFFNPILPT 184
           DP+    W+   L  DL+LLENQLP+ +L +LF L+  +   GRSLN+L  NFF+     
Sbjct: 145 DPLFKMPWVRKVLVTDLLLLENQLPWFVLNRLFELSDTYDSEGRSLNQLAENFFHHSALR 204

Query: 185 MGPVQTNSHIKGKHILDLLRNHLLPKAQHDMEYGDYPFWEYTHSATDLWETGVKF 349
            G ++ NS ++ KH+LDL RN +L K+   ++ G  P        T+L   G+ F
Sbjct: 205 PGWIRVNSGLQNKHLLDLQRNIILLKSNESVDGGILPI----PCVTELLLAGIDF 255


>ref|XP_002319925.1| predicted protein [Populus trichocarpa] gi|222858301|gb|EEE95848.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 47/121 (38%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
 Frame = +2

Query: 5   DPILGTTWMVYSLRKDLVLLENQLPFVILEKLFYLTKDHSRRGRS---LNELLTNFF-NP 172
           DP+  T+WMV +LR+DL LLENQ+PF  LE LF LT   S  G+S   L +L  +FF + 
Sbjct: 81  DPVFNTSWMVLTLRRDLALLENQIPFFALEWLFKLTVKPSAIGQSLPTLPDLAFDFFKSS 140

Query: 173 ILPTMGPVQTNSHIKGKHILDLLRNHLLPKAQHDMEYGDYPFWEYTHSATDLWETGVKFR 352
           +   +G +  +  I   H+L L+ N  LP +      G    WE+ H ++ L E G+KF 
Sbjct: 141 LYINIGTLAVSRRIV-PHLLALIHNCYLPSSSRPNPRG-RGGWEFIHCSSVLLEAGIKFE 198

Query: 353 K 355
           +
Sbjct: 199 R 199


>ref|XP_002319926.1| predicted protein [Populus trichocarpa] gi|222858302|gb|EEE95849.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 46/120 (38%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
 Frame = +2

Query: 5   DPILGTTWMVYSLRKDLVLLENQLPFVILEKLFYLTKDHSRRGRS---LNELLTNFFNPI 175
           DP+  T+WMV +LR+DL LLENQ+PF  LE LF LT   S  G+S   L +L  +FF   
Sbjct: 150 DPVFNTSWMVLTLRRDLALLENQIPFFALEWLFKLTVKPSAIGQSLPTLPDLAFDFFKSS 209

Query: 176 LPTMGPVQTNSHIKGKHILDLLRNHLLPKAQHDMEYGDYPFWEYTHSATDLWETGVKFRK 355
           L         S     H+L L+ N  LP +      G    WE+ H ++ L E G++F +
Sbjct: 210 LYINRGTLAVSRRIVPHLLGLIHNCYLPSSSRPNPRG-RGGWEFIHCSSVLLEAGIEFER 268


>emb|CAN75021.1| hypothetical protein VITISV_026781 [Vitis vinifera]
          Length = 441

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 43/118 (36%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
 Frame = +2

Query: 5   DPILGTTWMVYSLRKDLVLLENQLPFVILEKLFYLTK-DHSRRGRSLNELLTNFFNPILP 181
           DP++  +W+     +DL+LLENQLPF +L++LF LTK      G SL  L+  FFN  L 
Sbjct: 159 DPLVSMSWVFSFFLRDLLLLENQLPFFVLQRLFDLTKMPGEESGPSLASLVLGFFNNTLQ 218

Query: 182 TMGPV-QTNSHIKGKHILDLLRNHLLPKAQHDMEYGDYPFWEYTHSATDLWETGVKFR 352
               + Q + ++KGKH LDLLR   +P+ Q ++   D+         + L + G+K +
Sbjct: 219 RPDEILQKHCNLKGKHXLDLLRLSFIPEEQ-ELGTXDHXPTHLIQCVSKLRKAGIKLK 275


>ref|XP_002283339.2| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera]
          Length = 442

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
 Frame = +2

Query: 5   DPILGTTWMVYSLRKDLVLLENQLPFVILEKLFYLTK-DHSRRGRSLNELLTNFFNPILP 181
           DP++  +W+     +DL+LLENQLPF +L++LF LTK      G SL  L+  FFN  L 
Sbjct: 160 DPLVSMSWVFSFFLRDLLLLENQLPFFVLQRLFDLTKMPGEESGPSLASLVLGFFNNTLQ 219

Query: 182 TMGPV-QTNSHIKGKHILDLLRNHLLPKAQHDMEYGDYPFWEYTHSATDLWETGVKFRKK 358
               + Q + ++KGKH LDLLR   +P+ Q   E G        H  T L +   K RK 
Sbjct: 220 RPDEILQKHCNLKGKHFLDLLRLSFIPEEQ---ELG-----TLDHRPTHLIQCVSKLRKA 271

Query: 359 NV 364
            +
Sbjct: 272 GI 273


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