BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021600
         (1134 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323257.1| predicted protein [Populus trichocarpa] gi|2...   218   2e-54
emb|CBI30093.3| unnamed protein product [Vitis vinifera]              217   5e-54
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I...   217   5e-54
ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycin...   216   6e-54
ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, I...   214   4e-53

>ref|XP_002323257.1| predicted protein [Populus trichocarpa] gi|222867887|gb|EEF05018.1|
            predicted protein [Populus trichocarpa]
          Length = 216

 Score =  218 bits (555), Expect = 2e-54
 Identities = 113/211 (53%), Positives = 141/211 (66%)
 Frame = -2

Query: 1082 GGCLSAFIDAGSVESHRYYLARRTTLEMLRDRGYDVPDTDLDLSLQAFRSTYGQSPNLEH 903
            G CLS+F+D GS ESHRYYL+RRT LEML+DRGY VP +++D+SLQ FR  YGQ+P++E 
Sbjct: 5    GRCLSSFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPDIEL 64

Query: 902  IRISLPLLSDSSKKILVIFCGTEVVKLAMVRNIFNQIAXXXXXXXXXXXXXNKITAQARQ 723
            ++ S    SD SK++LVIFCG  VVK+ M+R I  QI              N IT QA +
Sbjct: 65   LKFSATHKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGLILVLQNNITNQAMK 124

Query: 722  ALAICRVKTETFQITDLLVNIMKHFLMPXXXXXXXXXXXXXXXKYSVGENQIPRMLETDA 543
            AL + + K E FQITDLLVNI KH L P               KYS+ E Q+PR+L+ DA
Sbjct: 125  ALDLFKFKIEIFQITDLLVNITKHILKPKHQVLSEQAKQRLLKKYSIEEKQLPRLLKKDA 184

Query: 542  VARYYGLEKGQVVKVTSDDDVAESHATYRCV 450
            ++RYYGLE+GQVVKVT D D+  SH TYRCV
Sbjct: 185  ISRYYGLERGQVVKVTYDGDITGSHVTYRCV 215


>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  217 bits (552), Expect = 5e-54
 Identities = 114/209 (54%), Positives = 139/209 (66%)
 Frame = -2

Query: 1076 CLSAFIDAGSVESHRYYLARRTTLEMLRDRGYDVPDTDLDLSLQAFRSTYGQSPNLEHIR 897
            CLS+F+D G +ESHRYYLARRT LEMLRDRGY +P  D+D+SLQ FRS Y Q P+ + +R
Sbjct: 121  CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 180

Query: 896  ISLPLLSDSSKKILVIFCGTEVVKLAMVRNIFNQIAXXXXXXXXXXXXXNKITAQARQAL 717
            IS  L SD SKKILVIFCG +VVK+  +R+I  QI              N IT+QA +A+
Sbjct: 181  ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 240

Query: 716  AICRVKTETFQITDLLVNIMKHFLMPXXXXXXXXXXXXXXXKYSVGENQIPRMLETDAVA 537
             +   + E FQITDLLVNI KH L P               KYS+ E Q+PRML+ DA+A
Sbjct: 241  DLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIA 300

Query: 536  RYYGLEKGQVVKVTSDDDVAESHATYRCV 450
            RYYGLEKGQVVKV  + ++  SH TYRCV
Sbjct: 301  RYYGLEKGQVVKVIYNGEITGSHVTYRCV 329


>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
            RPABC1-like [Vitis vinifera]
          Length = 229

 Score =  217 bits (552), Expect = 5e-54
 Identities = 114/209 (54%), Positives = 139/209 (66%)
 Frame = -2

Query: 1076 CLSAFIDAGSVESHRYYLARRTTLEMLRDRGYDVPDTDLDLSLQAFRSTYGQSPNLEHIR 897
            CLS+F+D G +ESHRYYLARRT LEMLRDRGY +P  D+D+SLQ FRS Y Q P+ + +R
Sbjct: 20   CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 79

Query: 896  ISLPLLSDSSKKILVIFCGTEVVKLAMVRNIFNQIAXXXXXXXXXXXXXNKITAQARQAL 717
            IS  L SD SKKILVIFCG +VVK+  +R+I  QI              N IT+QA +A+
Sbjct: 80   ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 139

Query: 716  AICRVKTETFQITDLLVNIMKHFLMPXXXXXXXXXXXXXXXKYSVGENQIPRMLETDAVA 537
             +   + E FQITDLLVNI KH L P               KYS+ E Q+PRML+ DA+A
Sbjct: 140  DLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIA 199

Query: 536  RYYGLEKGQVVKVTSDDDVAESHATYRCV 450
            RYYGLEKGQVVKV  + ++  SH TYRCV
Sbjct: 200  RYYGLEKGQVVKVIYNGEITGSHVTYRCV 228


>ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycine max]
            gi|255627335|gb|ACU14012.1| unknown [Glycine max]
          Length = 237

 Score =  216 bits (551), Expect = 6e-54
 Identities = 115/217 (52%), Positives = 144/217 (66%), Gaps = 1/217 (0%)
 Frame = -2

Query: 1097 EKMEQG-GCLSAFIDAGSVESHRYYLARRTTLEMLRDRGYDVPDTDLDLSLQAFRSTYGQ 921
            E+ EQ  GCLS F+D GSVESHRYYL+RRTTLEML+DRGY +P  ++DLSL  FR  +GQ
Sbjct: 20   EEAEQAKGCLSKFVDNGSVESHRYYLSRRTTLEMLKDRGYSIPSHEIDLSLSDFRDIHGQ 79

Query: 920  SPNLEHIRISLPLLSDSSKKILVIFCGTEVVKLAMVRNIFNQIAXXXXXXXXXXXXXNKI 741
             P+ + +R+SL   ++SSK+ILVIFCG  VVK+  +RN   QI              N I
Sbjct: 80   FPDPDRLRLSLTHATNSSKRILVIFCGPGVVKVTAIRNTAGQIINRDTLTGLILIVENHI 139

Query: 740  TAQARQALAICRVKTETFQITDLLVNIMKHFLMPXXXXXXXXXXXXXXXKYSVGENQIPR 561
            T+QA +A+ +   K E FQITDLLVNI KH L P               KY++ E Q+PR
Sbjct: 140  TSQALKAVNLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKINLLKKYNIEEKQLPR 199

Query: 560  MLETDAVARYYGLEKGQVVKVTSDDDVAESHATYRCV 450
            ML+TDA+ARYYGLE+GQVVKVT   +V + H TYRCV
Sbjct: 200  MLQTDAIARYYGLERGQVVKVTYSGEVTQMHVTYRCV 236


>ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
            RPABC1-like [Cucumis sativus]
            gi|449524637|ref|XP_004169328.1| PREDICTED: DNA-directed
            RNA polymerases I, II, and III subunit RPABC1-like
            [Cucumis sativus]
          Length = 227

 Score =  214 bits (544), Expect = 4e-53
 Identities = 109/214 (50%), Positives = 142/214 (66%)
 Frame = -2

Query: 1091 MEQGGCLSAFIDAGSVESHRYYLARRTTLEMLRDRGYDVPDTDLDLSLQAFRSTYGQSPN 912
            +E G CLS++ID G+ ESHRY+L+RRT +EML+DRGY +   ++D SLQ FR T+GQ P+
Sbjct: 13   VEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPD 72

Query: 911  LEHIRISLPLLSDSSKKILVIFCGTEVVKLAMVRNIFNQIAXXXXXXXXXXXXXNKITAQ 732
            ++ +++S    SD SK++LV+FCGT  VK+  +RNI  QIA             N+IT Q
Sbjct: 73   VDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLILIVQNQITNQ 132

Query: 731  ARQALAICRVKTETFQITDLLVNIMKHFLMPXXXXXXXXXXXXXXXKYSVGENQIPRMLE 552
            A +A+ +   K E FQITDLLVNI KH L P               +YS+ E Q+PRML 
Sbjct: 133  AMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLR 192

Query: 551  TDAVARYYGLEKGQVVKVTSDDDVAESHATYRCV 450
            TDA+ARYYGLEKGQVVKVT D D+  +H TYRCV
Sbjct: 193  TDAIARYYGLEKGQVVKVTYDGDMTRAHITYRCV 226