BLASTX nr result

ID: Coptis24_contig00021599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021599
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73304.1| hypothetical protein VITISV_023242 [Vitis vinifera]   183   4e-44
emb|CBI25744.3| unnamed protein product [Vitis vinifera]              181   1e-43
ref|XP_003635589.1| PREDICTED: uncharacterized protein LOC100854...   181   2e-43
ref|XP_002268164.2| PREDICTED: uncharacterized protein LOC100254...   179   4e-43
ref|XP_002522895.1| conserved hypothetical protein [Ricinus comm...   167   2e-39

>emb|CAN73304.1| hypothetical protein VITISV_023242 [Vitis vinifera]
          Length = 266

 Score =  183 bits (464), Expect = 4e-44
 Identities = 100/199 (50%), Positives = 140/199 (70%), Gaps = 5/199 (2%)
 Frame = -1

Query: 648 RDMKSCILRSRFYLPRQSYLSTSPAKTLFSYSSKASST----PKGTTYTKPSAGHLTKQS 481
           ++MK+  L+ + ++P  + L T  A  LF    K  S+     K ++ + PS GH+    
Sbjct: 75  KEMKASALKFQSHIPSSTNLPTPTANPLFLIPFKPRSSLNHPAKPSSVSLPSRGHI---- 130

Query: 480 VRNKPLILNS-TPATKTLTKDVVQLVSDDGYSRFVVLGAVSFGFAMLLAVMDDKNRALAF 304
             NKPL+ +  TP ++  +K+    VS +G SRFV++GAVS G  +LL  +D+ ++ALA 
Sbjct: 131 --NKPLVSSGLTPRSQKPSKEEFCQVSANGCSRFVMIGAVSVGVVLLLMGVDE-HKALAL 187

Query: 303 GPEGPLMEDFWDNMRRYGLYALTVSTGALYTIFQPIVELLKNPISAILIVVILAGSFYIV 124
           GPEGPLME+FWDN+RRY LY LTVSTGA+YT+F PI+ELLKNPISAIL++VI  GS YIV
Sbjct: 188 GPEGPLMEEFWDNVRRYALYFLTVSTGAVYTVFVPILELLKNPISAILVLVIFGGSLYIV 247

Query: 123 TQVVSAMVGVSDFAYEYGY 67
           +QV+SAMVGV++F+Y+Y Y
Sbjct: 248 SQVISAMVGVTEFSYDYSY 266


>emb|CBI25744.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  181 bits (459), Expect = 1e-43
 Identities = 99/199 (49%), Positives = 140/199 (70%), Gaps = 5/199 (2%)
 Frame = -1

Query: 648 RDMKSCILRSRFYLPRQSYLSTSPAKTLFSYSSKASST----PKGTTYTKPSAGHLTKQS 481
           ++MK+  L+ + ++P  + L T  A  LF    K  S+     K ++ + PS GH+    
Sbjct: 88  KEMKASALKFQSHIPSPTNLPTPTANPLFLIPFKPRSSLNHPAKPSSVSLPSRGHI---- 143

Query: 480 VRNKPLILNS-TPATKTLTKDVVQLVSDDGYSRFVVLGAVSFGFAMLLAVMDDKNRALAF 304
             NKPL+ +  TP ++  +K+    VS +G SRFV++GAVS G  +LL  +D+ ++ALA 
Sbjct: 144 --NKPLVSSGLTPRSQKPSKEEFCQVSANGCSRFVMIGAVSVGVVLLLMGVDE-HKALAL 200

Query: 303 GPEGPLMEDFWDNMRRYGLYALTVSTGALYTIFQPIVELLKNPISAILIVVILAGSFYIV 124
           GPEGPLME+FWDN+RRY LY LTVSTGA+YT+F PI+ELLKNPISAIL++VI  GS +IV
Sbjct: 201 GPEGPLMEEFWDNVRRYALYFLTVSTGAVYTVFVPILELLKNPISAILVLVIFGGSLFIV 260

Query: 123 TQVVSAMVGVSDFAYEYGY 67
           +QV+SAMVGV++F+Y+Y Y
Sbjct: 261 SQVISAMVGVTEFSYDYSY 279


>ref|XP_003635589.1| PREDICTED: uncharacterized protein LOC100854249 [Vitis vinifera]
           gi|296088236|emb|CBI35752.3| unnamed protein product
           [Vitis vinifera]
          Length = 279

 Score =  181 bits (458), Expect = 2e-43
 Identities = 99/199 (49%), Positives = 139/199 (69%), Gaps = 5/199 (2%)
 Frame = -1

Query: 648 RDMKSCILRSRFYLPRQSYLSTSPAKTLFSYSSKASST----PKGTTYTKPSAGHLTKQS 481
           ++MK+  L+ + ++P  + L T  A  LF    K   +     K ++ + PS GH+    
Sbjct: 88  KEMKASALKFQSHIPSPTNLPTPTANPLFLIPFKPRPSLNHPAKPSSVSLPSRGHI---- 143

Query: 480 VRNKPLILNS-TPATKTLTKDVVQLVSDDGYSRFVVLGAVSFGFAMLLAVMDDKNRALAF 304
             NKPL+ +  TP ++  +K+    VS +G SRFV++GAVS G  +LL  +D+ ++ALA 
Sbjct: 144 --NKPLVSSGLTPRSQKPSKEEFCQVSANGCSRFVMIGAVSVGVVLLLMGVDE-HKALAL 200

Query: 303 GPEGPLMEDFWDNMRRYGLYALTVSTGALYTIFQPIVELLKNPISAILIVVILAGSFYIV 124
           GPEGPLME+FWDN+RRY LY LTVSTGA+YT+F PI+ELLKNPISAIL++VI  GS YIV
Sbjct: 201 GPEGPLMEEFWDNVRRYALYFLTVSTGAVYTVFVPILELLKNPISAILVLVIFGGSLYIV 260

Query: 123 TQVVSAMVGVSDFAYEYGY 67
           +QV+SAMVGV++F+Y+Y Y
Sbjct: 261 SQVISAMVGVTEFSYDYSY 279


>ref|XP_002268164.2| PREDICTED: uncharacterized protein LOC100254484 [Vitis vinifera]
          Length = 190

 Score =  179 bits (455), Expect = 4e-43
 Identities = 99/197 (50%), Positives = 138/197 (70%), Gaps = 5/197 (2%)
 Frame = -1

Query: 642 MKSCILRSRFYLPRQSYLSTSPAKTLFSYSSKASST----PKGTTYTKPSAGHLTKQSVR 475
           MK+  L+ + ++P  + L T  A  LF    K  S+     K ++ + PS GH+      
Sbjct: 1   MKASALKFQSHIPSPTNLPTPTANPLFLIPFKPRSSLNHPAKPSSVSLPSRGHI------ 54

Query: 474 NKPLILNS-TPATKTLTKDVVQLVSDDGYSRFVVLGAVSFGFAMLLAVMDDKNRALAFGP 298
           NKPL+ +  TP ++  +K+    VS +G SRFV++GAVS G  +LL  +D+ ++ALA GP
Sbjct: 55  NKPLVSSGLTPRSQKPSKEEFCQVSANGCSRFVMIGAVSVGVVLLLMGVDE-HKALALGP 113

Query: 297 EGPLMEDFWDNMRRYGLYALTVSTGALYTIFQPIVELLKNPISAILIVVILAGSFYIVTQ 118
           EGPLME+FWDN+RRY LY LTVSTGA+YT+F PI+ELLKNPISAIL++VI  GS +IV+Q
Sbjct: 114 EGPLMEEFWDNVRRYALYFLTVSTGAVYTVFVPILELLKNPISAILVLVIFGGSLFIVSQ 173

Query: 117 VVSAMVGVSDFAYEYGY 67
           V+SAMVGV++F+Y+Y Y
Sbjct: 174 VISAMVGVTEFSYDYSY 190


>ref|XP_002522895.1| conserved hypothetical protein [Ricinus communis]
           gi|223537880|gb|EEF39495.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 185

 Score =  167 bits (424), Expect = 2e-39
 Identities = 97/193 (50%), Positives = 126/193 (65%), Gaps = 1/193 (0%)
 Frame = -1

Query: 642 MKSCILRSRF-YLPRQSYLSTSPAKTLFSYSSKASSTPKGTTYTKPSAGHLTKQSVRNKP 466
           MK+  LRS+F +L R + L+   + + F    K  S  K      PS+     +    K 
Sbjct: 1   MKTFTLRSQFHFLGRCTNLTNPTSNSPFLVPFKTKSHLKC-----PSSNQTVPEKCSQKS 55

Query: 465 LILNSTPATKTLTKDVVQLVSDDGYSRFVVLGAVSFGFAMLLAVMDDKNRALAFGPEGPL 286
           L     P  +   ++    VS +G  R VV+GA S G  + L  MD+ ++ALA GPEGPL
Sbjct: 56  LYFK--PICQKHLREKRSNVSPNGCLRSVVVGAASVGVVLFLMGMDE-HKALALGPEGPL 112

Query: 285 MEDFWDNMRRYGLYALTVSTGALYTIFQPIVELLKNPISAILIVVILAGSFYIVTQVVSA 106
           ME+FWDN+RRY LYALTVSTGALYTI QPIVELLKNPISA+L++VI  GSFYIV+QV+SA
Sbjct: 113 MEEFWDNVRRYALYALTVSTGALYTILQPIVELLKNPISAVLVIVIFGGSFYIVSQVLSA 172

Query: 105 MVGVSDFAYEYGY 67
           M G++DF+Y+YGY
Sbjct: 173 MFGITDFSYDYGY 185


Top