BLASTX nr result

ID: Coptis24_contig00021598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021598
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635589.1| PREDICTED: uncharacterized protein LOC100854...    82   6e-14
ref|XP_002307907.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
emb|CAN73304.1| hypothetical protein VITISV_023242 [Vitis vinifera]    80   1e-13
emb|CBI25744.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002268164.2| PREDICTED: uncharacterized protein LOC100254...    79   3e-13

>ref|XP_003635589.1| PREDICTED: uncharacterized protein LOC100854249 [Vitis vinifera]
           gi|296088236|emb|CBI35752.3| unnamed protein product
           [Vitis vinifera]
          Length = 279

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 58/141 (41%), Positives = 82/141 (58%), Gaps = 1/141 (0%)
 Frame = -3

Query: 420 RDMNSSCTIRSRFYLPRQSYLSTSPAKTLFSYSSKAPRAPEGTTYTKSSAGHLTKQSFRN 241
           ++M +S  ++ + ++P  + L T  A  LF    K PR P      K S+  L  +   N
Sbjct: 88  KEMKASA-LKFQSHIPSPTNLPTPTANPLFLIPFK-PR-PSLNHPAKPSSVSLPSRGHIN 144

Query: 240 KPLILN-TTTATKTLIKVVVQPVSDDKYSRFVVLGAVSFGFAMLLAAMDDQNKALAFGPE 64
           KPL+ +  T  ++   K     VS +  SRFV++GAVS G  +LL  +D+ +KALA GPE
Sbjct: 145 KPLVSSGLTPRSQKPSKEEFCQVSANGCSRFVMIGAVSVGVVLLLMGVDE-HKALALGPE 203

Query: 63  GPLMEDFCDNMRRYGLYALTV 1
           GPLME+F DN+RRY LY LTV
Sbjct: 204 GPLMEEFWDNVRRYALYFLTV 224


>ref|XP_002307907.1| predicted protein [Populus trichocarpa] gi|222853883|gb|EEE91430.1|
           predicted protein [Populus trichocarpa]
          Length = 198

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 57/132 (43%), Positives = 76/132 (57%)
 Frame = -3

Query: 396 IRSRFYLPRQSYLSTSPAKTLFSYSSKAPRAPEGTTYTKSSAGHLTKQSFRNKPLILNTT 217
           IR++ +L   +Y S   AKT    S K    P     T++ A   TK+  ++  L+  T 
Sbjct: 29  IRAKPHLQHPTYPSVILAKTAAGTSRKTLACP-----TRNYAA--TKRIDKSAVLLEFTP 81

Query: 216 TATKTLIKVVVQPVSDDKYSRFVVLGAVSFGFAMLLAAMDDQNKALAFGPEGPLMEDFCD 37
                    + Q +  +++SRF+VLGAVS G    L AMDDQ KALA GPEGPLME+F +
Sbjct: 82  ---------IKQELPKNEHSRFLVLGAVSVGIVWFLMAMDDQ-KALALGPEGPLMEEFWE 131

Query: 36  NMRRYGLYALTV 1
           N+RRY LYALTV
Sbjct: 132 NVRRYALYALTV 143


>emb|CAN73304.1| hypothetical protein VITISV_023242 [Vitis vinifera]
          Length = 266

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 57/141 (40%), Positives = 82/141 (58%), Gaps = 1/141 (0%)
 Frame = -3

Query: 420 RDMNSSCTIRSRFYLPRQSYLSTSPAKTLFSYSSKAPRAPEGTTYTKSSAGHLTKQSFRN 241
           ++M +S  ++ + ++P  + L T  A  LF    K PR+       K S+  L  +   N
Sbjct: 75  KEMKASA-LKFQSHIPSSTNLPTPTANPLFLIPFK-PRSSLNHP-AKPSSVSLPSRGHIN 131

Query: 240 KPLILN-TTTATKTLIKVVVQPVSDDKYSRFVVLGAVSFGFAMLLAAMDDQNKALAFGPE 64
           KPL+ +  T  ++   K     VS +  SRFV++GAVS G  +LL  +D+ +KALA GPE
Sbjct: 132 KPLVSSGLTPRSQKPSKEEFCQVSANGCSRFVMIGAVSVGVVLLLMGVDE-HKALALGPE 190

Query: 63  GPLMEDFCDNMRRYGLYALTV 1
           GPLME+F DN+RRY LY LTV
Sbjct: 191 GPLMEEFWDNVRRYALYFLTV 211


>emb|CBI25744.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 57/141 (40%), Positives = 82/141 (58%), Gaps = 1/141 (0%)
 Frame = -3

Query: 420 RDMNSSCTIRSRFYLPRQSYLSTSPAKTLFSYSSKAPRAPEGTTYTKSSAGHLTKQSFRN 241
           ++M +S  ++ + ++P  + L T  A  LF    K PR+       K S+  L  +   N
Sbjct: 88  KEMKASA-LKFQSHIPSPTNLPTPTANPLFLIPFK-PRSSLNHP-AKPSSVSLPSRGHIN 144

Query: 240 KPLILN-TTTATKTLIKVVVQPVSDDKYSRFVVLGAVSFGFAMLLAAMDDQNKALAFGPE 64
           KPL+ +  T  ++   K     VS +  SRFV++GAVS G  +LL  +D+ +KALA GPE
Sbjct: 145 KPLVSSGLTPRSQKPSKEEFCQVSANGCSRFVMIGAVSVGVVLLLMGVDE-HKALALGPE 203

Query: 63  GPLMEDFCDNMRRYGLYALTV 1
           GPLME+F DN+RRY LY LTV
Sbjct: 204 GPLMEEFWDNVRRYALYFLTV 224


>ref|XP_002268164.2| PREDICTED: uncharacterized protein LOC100254484 [Vitis vinifera]
          Length = 190

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 55/133 (41%), Positives = 77/133 (57%), Gaps = 1/133 (0%)
 Frame = -3

Query: 396 IRSRFYLPRQSYLSTSPAKTLFSYSSKAPRAPEGTTYTKSSAGHLTKQSFRNKPLILN-T 220
           ++ + ++P  + L T  A  LF    K PR+       K S+  L  +   NKPL+ +  
Sbjct: 6   LKFQSHIPSPTNLPTPTANPLFLIPFK-PRSSLNHP-AKPSSVSLPSRGHINKPLVSSGL 63

Query: 219 TTATKTLIKVVVQPVSDDKYSRFVVLGAVSFGFAMLLAAMDDQNKALAFGPEGPLMEDFC 40
           T  ++   K     VS +  SRFV++GAVS G  +LL  +D+ +KALA GPEGPLME+F 
Sbjct: 64  TPRSQKPSKEEFCQVSANGCSRFVMIGAVSVGVVLLLMGVDE-HKALALGPEGPLMEEFW 122

Query: 39  DNMRRYGLYALTV 1
           DN+RRY LY LTV
Sbjct: 123 DNVRRYALYFLTV 135


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