BLASTX nr result

ID: Coptis24_contig00021596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021596
         (990 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278312.1| PREDICTED: uncharacterized protein LOC100241...   338   9e-91
ref|XP_004144667.1| PREDICTED: rhodanese-like domain-containing ...   324   2e-86
ref|XP_002532336.1| conserved hypothetical protein [Ricinus comm...   317   4e-84
ref|XP_002331043.1| predicted protein [Populus trichocarpa] gi|2...   316   5e-84
ref|XP_002879974.1| hypothetical protein ARALYDRAFT_483311 [Arab...   314   2e-83

>ref|XP_002278312.1| PREDICTED: uncharacterized protein LOC100241760 [Vitis vinifera]
           gi|297739859|emb|CBI30041.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  338 bits (868), Expect = 9e-91
 Identities = 175/233 (75%), Positives = 202/233 (86%), Gaps = 6/233 (2%)
 Frame = -3

Query: 925 MAGLGFCTPISCT---RTSWLVLESTR---MPYKPLRSRGVVIRAEVNFVNSQDAKELIA 764
           MAGL  C P+S     RTS L+LE+     M  K L  R + I+AEVNFVN+++ K+LIA
Sbjct: 1   MAGLCCCMPLSSRSNFRTSRLMLETRHGRTMVGKSLGRRNLQIKAEVNFVNAEEGKKLIA 60

Query: 763 VEGYAVLDVRDKSQYERAHIKSCHHIPLFIENNDNDLGTIIKRTVHNNFSGLFFGLPFTK 584
           VEGYA+LDVRDKSQY+RAHIKSC+H+PLFIEN DNDLGTIIKRTVHNNFSGLFFGLPFTK
Sbjct: 61  VEGYAILDVRDKSQYDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTK 120

Query: 583 INADFLKLVKSQFSQDSKLLLVCQEGLRSAAAANKLEEAGFENISCITSGLQSVKPAGTF 404
           +N DF++ VKSQFS +SKLLLVCQEGLRSAAAA+KLE+AGF NI+CITSGLQ+VKP G F
Sbjct: 121 VNPDFVQSVKSQFSPESKLLLVCQEGLRSAAAASKLEQAGFANIACITSGLQTVKP-GMF 179

Query: 403 DTVGSTELQNAGKAGLVTVQGKISAALGTVLICAYLFITFFPDQAEKILQMVP 245
           D+VGSTELQ+AGKAGLVT+QGKISA LGTVLICA+LFITFFP+QAEK+LQM P
Sbjct: 180 DSVGSTELQDAGKAGLVTIQGKISAVLGTVLICAFLFITFFPEQAEKLLQMAP 232


>ref|XP_004144667.1| PREDICTED: rhodanese-like domain-containing protein 9,
           chloroplastic-like [Cucumis sativus]
          Length = 246

 Score =  324 bits (831), Expect = 2e-86
 Identities = 165/235 (70%), Positives = 197/235 (83%), Gaps = 8/235 (3%)
 Frame = -3

Query: 925 MAGLGFCTPI----SCTRTSWLVLEST----RMPYKPLRSRGVVIRAEVNFVNSQDAKEL 770
           MAG+  C       S  RTSWL L +       P K +  R V I+AE+NFVN+++AK+L
Sbjct: 11  MAGIRPCCSTLPSRSNPRTSWLTLRTVPHRRTYPGKRVLQRKVGIKAEINFVNAEEAKKL 70

Query: 769 IAVEGYAVLDVRDKSQYERAHIKSCHHIPLFIENNDNDLGTIIKRTVHNNFSGLFFGLPF 590
           IAV+GY ++DVRDKSQ++RAHIKSC+H+PLFIEN DNDLGTIIKRTVHNNFSGLFFGLPF
Sbjct: 71  IAVDGYVIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 130

Query: 589 TKINADFLKLVKSQFSQDSKLLLVCQEGLRSAAAANKLEEAGFENISCITSGLQSVKPAG 410
           TK+N +F++ VK+Q S  SKLLLVCQEGLRS AAA+KLE+AGFENI+CITSGLQSVKP G
Sbjct: 131 TKLNPEFVQSVKAQLSPQSKLLLVCQEGLRSTAAADKLEKAGFENIACITSGLQSVKP-G 189

Query: 409 TFDTVGSTELQNAGKAGLVTVQGKISAALGTVLICAYLFITFFPDQAEKILQMVP 245
           +FD+VGST+LQ+AGKAGLVT+QGKISA LGTVLICAYLF+T FP+QAEK+LQM P
Sbjct: 190 SFDSVGSTQLQDAGKAGLVTIQGKISAVLGTVLICAYLFVTLFPEQAEKLLQMAP 244


>ref|XP_002532336.1| conserved hypothetical protein [Ricinus communis]
           gi|223527953|gb|EEF30038.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 235

 Score =  317 bits (811), Expect = 4e-84
 Identities = 163/236 (69%), Positives = 194/236 (82%), Gaps = 7/236 (2%)
 Frame = -3

Query: 925 MAGLGF-CTPISCT---RTSWLVLESTR---MPYKPLRSRGVVIRAEVNFVNSQDAKELI 767
           MAG+   C  +S     +T WL   + R   +P K   SR   IRAEVN+V+ ++AK+L+
Sbjct: 1   MAGIATSCLTVSSRSKFQTCWLEYGTHRARDIPRKLSNSREFGIRAEVNYVSGEEAKKLV 60

Query: 766 AVEGYAVLDVRDKSQYERAHIKSCHHIPLFIENNDNDLGTIIKRTVHNNFSGLFFGLPFT 587
           A EGY +LDVRD++QY+RAHIKSC+H+PLFIEN DNDLGTIIKRTVHNNFSGLFFGL FT
Sbjct: 61  AAEGYEILDVRDRTQYDRAHIKSCYHVPLFIENKDNDLGTIIKRTVHNNFSGLFFGLAFT 120

Query: 586 KINADFLKLVKSQFSQDSKLLLVCQEGLRSAAAANKLEEAGFENISCITSGLQSVKPAGT 407
           K N +F++ VK+QFS DSKLLLVCQEGLRS AAANKLE+AGF+N++CITSGLQSVKP GT
Sbjct: 121 KPNPEFVESVKNQFSPDSKLLLVCQEGLRSTAAANKLEQAGFQNVACITSGLQSVKP-GT 179

Query: 406 FDTVGSTELQNAGKAGLVTVQGKISAALGTVLICAYLFITFFPDQAEKILQMVPGN 239
           FD+ GS+ELQNAGK GLVTVQGKISA LGTVLICAYLFITFFP+QAEK+ Q+ P +
Sbjct: 180 FDSEGSSELQNAGKGGLVTVQGKISAVLGTVLICAYLFITFFPEQAEKLFQLAPAS 235


>ref|XP_002331043.1| predicted protein [Populus trichocarpa] gi|222872973|gb|EEF10104.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  316 bits (810), Expect = 5e-84
 Identities = 161/236 (68%), Positives = 190/236 (80%), Gaps = 7/236 (2%)
 Frame = -3

Query: 925 MAGLGFCTPISCTR----TSWLVLESTR---MPYKPLRSRGVVIRAEVNFVNSQDAKELI 767
           MAG+  C     +R    TSWL  ++     +  KP R R   IRAEVNFVN  +AK+L+
Sbjct: 1   MAGIATCALTLSSRSNFGTSWLEFDTHHRRTIRGKPKRWRNFGIRAEVNFVNPDEAKKLV 60

Query: 766 AVEGYAVLDVRDKSQYERAHIKSCHHIPLFIENNDNDLGTIIKRTVHNNFSGLFFGLPFT 587
             EGYAVLDVRDK+QYERAHIKSC+H+PLFI+N DND GTIIKRTVHNNFSGLFFGLPFT
Sbjct: 61  TDEGYAVLDVRDKTQYERAHIKSCYHVPLFIQNQDNDFGTIIKRTVHNNFSGLFFGLPFT 120

Query: 586 KINADFLKLVKSQFSQDSKLLLVCQEGLRSAAAANKLEEAGFENISCITSGLQSVKPAGT 407
           K+N  F+  V+SQ S  SKLL+VCQEGLRS AAA KLE AGF+N++C+TSGLQSVKP GT
Sbjct: 121 KLNDKFVDSVQSQLSPQSKLLIVCQEGLRSTAAATKLEAAGFKNVACVTSGLQSVKP-GT 179

Query: 406 FDTVGSTELQNAGKAGLVTVQGKISAALGTVLICAYLFITFFPDQAEKILQMVPGN 239
           FD+ GSTELQ+AGKAGL+T+QGKISA LGTVL+CAYLFITFFP+QAEK+LQ+ P +
Sbjct: 180 FDSEGSTELQDAGKAGLITIQGKISAVLGTVLVCAYLFITFFPEQAEKLLQLAPSS 235


>ref|XP_002879974.1| hypothetical protein ARALYDRAFT_483311 [Arabidopsis lyrata subsp.
           lyrata] gi|297325813|gb|EFH56233.1| hypothetical protein
           ARALYDRAFT_483311 [Arabidopsis lyrata subsp. lyrata]
          Length = 234

 Score =  314 bits (805), Expect = 2e-83
 Identities = 153/193 (79%), Positives = 178/193 (92%)
 Frame = -3

Query: 838 LRSRGVVIRAEVNFVNSQDAKELIAVEGYAVLDVRDKSQYERAHIKSCHHIPLFIENNDN 659
           +R R + I AEV FVN+++AK+LIA EGY+V+DVRDK+Q+ERAHIKSC HIPLFI N DN
Sbjct: 38  IRRRSLRIAAEVKFVNAEEAKQLIAEEGYSVVDVRDKTQFERAHIKSCSHIPLFIYNEDN 97

Query: 658 DLGTIIKRTVHNNFSGLFFGLPFTKINADFLKLVKSQFSQDSKLLLVCQEGLRSAAAANK 479
           D+GTIIKRTVHNNFSGLFFGLPFTK+N DFLK VK++FSQD KLLLVCQEGLRSAAAA++
Sbjct: 98  DIGTIIKRTVHNNFSGLFFGLPFTKVNPDFLKSVKNEFSQDRKLLLVCQEGLRSAAAASR 157

Query: 478 LEEAGFENISCITSGLQSVKPAGTFDTVGSTELQNAGKAGLVTVQGKISAALGTVLICAY 299
           LEEAG+ENI+C+TSGLQSVKP GTF++VGSTELQNAGKAGL+T+QGKISA LGTVL+CAY
Sbjct: 158 LEEAGYENIACVTSGLQSVKP-GTFESVGSTELQNAGKAGLITIQGKISAVLGTVLVCAY 216

Query: 298 LFITFFPDQAEKI 260
           LFI FFPDQAEK+
Sbjct: 217 LFIQFFPDQAEKL 229


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